DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTTPTVS
Uniprot ID:
O14974
Source protein:
Protein phosphatase 1 regulatory subunit 12A
Source gene:
PPP1R12A
Class:
DEG_SCF_FBW7_1
Location:
395:401
E3 ligase:
FBXW7
DEGRON score:
0.9748
ASA_SCORE:
86.6
COIL:
0.9317
CONS_SCORE:
0.3443
DSS_SCORE:
0.5601
HELIX:
0.0157
FCONS_SCORE:
0.9178
RIG_SCORE:
0.7082
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A391T
TCGA-CN-6988
HNSC
TCGA
VTTPTVS
DEG_SCF_FBW7_1
0.2222
p.A391T
DO14208
HNSC
ICGC
VTTPTVS
DEG_SCF_FBW7_1
0.2222
p.P392H
TCGA-GN-A265
SKCM
TCGA
VTTPTVS
DEG_SCF_FBW7_1
0.25
p.P392H
DO37491
SKCM
ICGC
VTTPTVS
DEG_SCF_FBW7_1
0.25
p.A405T
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VTTPTVS
DEG_SCF_FBW7_1
0.2222
p.A405T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VTTPTVS
DEG_SCF_FBW7_1
0.2222
p.A394S
SIDM00710
Small Cell Lung Carcinoma
GDSC
VTTPTVS
DEG_SCF_FBW7_1
0.3056
p.A394S
ACH-000394
Lung Cancer
CCLE
VTTPTVS
DEG_SCF_FBW7_1
0.3056
p.A394S
NCI-H2081
lung
COSMIC
VTTPTVS
DEG_SCF_FBW7_1
0.3056
p.L407V
H2373
pleura
COSMIC
VTTPTVS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with PPP1R12A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTPTVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SCF_FBW7_1
395:401
VTTPTVS
FBXW7
0.9748
More...