DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VTVFTE
Uniprot ID:
P12270
Source protein:
Nucleoprotein TPR
Source gene:
TPR
Class:
LIG_APCC_ABBA_1
Location:
2222:2227
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7634
ASA_SCORE:
98.0167
COIL:
0.8773
CONS_SCORE:
0.4971
DSS_SCORE:
0.5009
HELIX:
0.0678
FCONS_SCORE:
0.9516
RIG_SCORE:
0.7866
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D2232Y
TCGA-44-7670
LUAD
TCGA
VTVFTE
LIG_APCC_ABBA_1
0.1944
p.D2232Y
DO23555
LUAD
ICGC
VTVFTE
LIG_APCC_ABBA_1
0.1944
p.V2222M
TCGA-A8-A06R
BRCA
TCGA
VTVFTE
LIG_APCC_ABBA_1
0.6097
p.V2222M
DO5165
BRCA
ICGC
VTVFTE
LIG_APCC_ABBA_1
0.6097
p.T2229A
TCGA-BR-6452
STAD
TCGA
VTVFTE
LIG_APCC_ABBA_1
0.2778
p.T2229A
DO38404
STAD
ICGC
VTVFTE
LIG_APCC_ABBA_1
0.2778
p.T2223A
TCGA-EO-A22R
UCEC
TCGA
VTVFTE
LIG_APCC_ABBA_1
0.6028
p.T2223A
DO42713
UCEC
ICGC
VTVFTE
LIG_APCC_ABBA_1
0.6028
p.P2212L
DO49684
LIAD
ICGC
VTVFTE
LIG_APCC_ABBA_1
0.0556
p.T2213S
DO48719
LIRI
ICGC
VTVFTE
LIG_APCC_ABBA_1
0.0833
p.S2234L
DO232224
PBCA
ICGC
VTVFTE
LIG_APCC_ABBA_1
0.1389
p.S2228R
SIDM00662
Melanoma
GDSC
VTVFTE
LIG_APCC_ABBA_1
0.3056
p.S2228R
ACH-000135
Non-Cancerous
CCLE
VTVFTE
LIG_APCC_ABBA_1
0.3056
p.S2228R
Hs940-T
skin
COSMIC
VTVFTE
LIG_APCC_ABBA_1
0.3056
p.T2229N
SIDM00241
Breast Carcinoma
GDSC
VTVFTE
LIG_APCC_ABBA_1
0.2778
p.T2229N
ACH-002179
Breast Cancer
CCLE
VTVFTE
LIG_APCC_ABBA_1
0.2778
p.T2229N
OCUB-M
breast
COSMIC
VTVFTE
LIG_APCC_ABBA_1
0.2778
p.H2236P
SIDM01728
Endometrial Carcinoma
GDSC
VTVFTE
LIG_APCC_ABBA_1
0.0833
p.H2236P
SIDM01321
Pancreatic Carcinoma
GDSC
VTVFTE
LIG_APCC_ABBA_1
0.0833
p.H2236P
ACH-000173
Endometrial/Uterine Cancer
CCLE
VTVFTE
LIG_APCC_ABBA_1
0.0833
p.H2236P
ACH-000307
Pancreatic Cancer
CCLE
VTVFTE
LIG_APCC_ABBA_1
0.0833
p.H2236P
ACH-001518
Endometrial/Uterine Cancer
CCLE
VTVFTE
LIG_APCC_ABBA_1
0.0833
p.T2226I
SIDM01608
Endometrial Carcinoma
GDSC
VTVFTE
LIG_APCC_ABBA_1
0.5966
p.T2226I
ACH-000990
Endometrial/Uterine Cancer
CCLE
VTVFTE
LIG_APCC_ABBA_1
0.5966
p.A2220V
SIDM01608
Endometrial Carcinoma
GDSC
VTVFTE
LIG_APCC_ABBA_1
0.2778
p.A2220V
ACH-000990
Endometrial/Uterine Cancer
CCLE
VTVFTE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with TPR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTVFTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12270
Nucleoprotein TPR
LIG_APCC_ABBA_1
2222:2227
VTVFTE
APC,CDC20,FZR1
0.7634
More...