DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVIHPD
Uniprot ID:
O60437
Source protein:
Periplakin
Source gene:
PPL
Class:
LIG_APCC_ABBA_1
Location:
1659:1664
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9386
ASA_SCORE:
81.9833
COIL:
0.5753
CONS_SCORE:
0.7094
DSS_SCORE:
0.3953
HELIX:
0.0605
FCONS_SCORE:
1.0108
RIG_SCORE:
0.7703
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1670Y
TCGA-4W-AA9S
GBM
TCGA
VVIHPD
LIG_APCC_ABBA_1
0.6111
p.R1650Q
TCGA-5M-AAT6
COAD
TCGA
VVIHPD
LIG_APCC_ABBA_1
0.0833
p.R1650Q
TCGA-AM-5821
COAD
TCGA
VVIHPD
LIG_APCC_ABBA_1
0.0833
p.L1654M
TCGA-AP-A1DK
UCEC
TCGA
VVIHPD
LIG_APCC_ABBA_1
0.1944
p.R1656C
TCGA-BR-4292
STAD
TCGA
VVIHPD
LIG_APCC_ABBA_1
0.25
p.R1656C
TCGA-BR-4361
STAD
TCGA
VVIHPD
LIG_APCC_ABBA_1
0.25
p.S1668Y
DO219108
GBM
ICGC
VVIHPD
LIG_APCC_ABBA_1
0.2222
p.D1662E
DO229028
LICA
ICGC
VVIHPD
LIG_APCC_ABBA_1
0.6758
p.R1653W
DO232224
PBCA
ICGC
VVIHPD
LIG_APCC_ABBA_1
0.1667
p.R1653W
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
VVIHPD
LIG_APCC_ABBA_1
0.1667
p.R1654C
DO38887
STAD
ICGC
VVIHPD
LIG_APCC_ABBA_1
0.1944
p.R1654C
DO38495
STAD
ICGC
VVIHPD
LIG_APCC_ABBA_1
0.1944
p.R1674H
DO40996
UCEC
ICGC
VVIHPD
LIG_APCC_ABBA_1
0.0556
p.R1674H
NCI-H1975
lung
COSMIC
VVIHPD
LIG_APCC_ABBA_1
0.0556
p.L1652M
DO42033
UCEC
ICGC
VVIHPD
LIG_APCC_ABBA_1
0.1389
p.R1655W
SIDM00121
T-Lymphoblastic Leukemia
GDSC
VVIHPD
LIG_APCC_ABBA_1
0.2222
p.R1655W
ACH-001738
Leukemia
CCLE
VVIHPD
LIG_APCC_ABBA_1
0.2222
p.R1655W
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
VVIHPD
LIG_APCC_ABBA_1
0.2222
p.R1674C
SW48
large_intestine
COSMIC
VVIHPD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with PPL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVIHPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60437
Periplakin
LIG_APCC_ABBA_1
1659:1664
VVIHPD
APC,CDC20,FZR1
0.9386
More...