DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVLHGD
Uniprot ID:
P08514
Source protein:
Integrin alpha-IIb
Source gene:
ITGA2B
Class:
LIG_APCC_ABBA_1
Location:
615:620
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9929
ASA_SCORE:
71
COIL:
0.8163
CONS_SCORE:
0.4113
DSS_SCORE:
0.4196
HELIX:
0.0338
FCONS_SCORE:
0.9705
RIG_SCORE:
0.758
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H622R
TCGA-B7-A5TI
STAD
TCGA
VVLHGD
LIG_APCC_ABBA_1
0.2778
p.H622R
DO222328
STAD
ICGC
VVLHGD
LIG_APCC_ABBA_1
0.2778
p.V630I
TCGA-BH-A0HI
BRCA
TCGA
VVLHGD
LIG_APCC_ABBA_1
0.0556
p.V630I
DO5801
BRCA
ICGC
VVLHGD
LIG_APCC_ABBA_1
0.0556
p.H622Y
TCGA-EE-A29E
SKCM
TCGA
VVLHGD
LIG_APCC_ABBA_1
0.2778
p.H622Y
DO37831
SKCM
ICGC
VVLHGD
LIG_APCC_ABBA_1
0.2778
p.T607M
TCGA-RD-A7C1
STAD
TCGA
VVLHGD
LIG_APCC_ABBA_1
0.1111
p.T607M
DO45299
LIRI
ICGC
VVLHGD
LIG_APCC_ABBA_1
0.1111
p.T607M
DO50132
STAD
ICGC
VVLHGD
LIG_APCC_ABBA_1
0.1111
p.R628Q
DO230309
COCA
ICGC
VVLHGD
LIG_APCC_ABBA_1
0.1111
p.H618R
DO48728
LIRI
ICGC
VVLHGD
LIG_APCC_ABBA_1
0.8244
p.V616M
SIDM00720
Mesothelioma
GDSC
VVLHGD
LIG_APCC_ABBA_1
0.6097
Drug responses associated with ITGA2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVLHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08514
Integrin alpha-IIb
LIG_APCC_ABBA_1
615:620
VVLHGD
APC,CDC20,FZR1
0.9929
More...