DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVLHID
Uniprot ID:
Q9NVT9
Source protein:
Armadillo repeat-containing protein 1
Source gene:
ARMC1
Class:
LIG_APCC_ABBA_1
Location:
145:150
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6063
ASA_SCORE:
25.4667
COIL:
0.1748
CONS_SCORE:
0.6298
DSS_SCORE:
0.2625
HELIX:
0.0132
FCONS_SCORE:
1.1968
RIG_SCORE:
0.871
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D154Y
TCGA-06-5416
GBM
TCGA
VVLHID
LIG_APCC_ABBA_1
0.2222
p.D154Y
DO10880
GBM
ICGC
VVLHID
LIG_APCC_ABBA_1
0.2222
p.I149M
TCGA-39-5021
LUSC
TCGA
VVLHID
LIG_APCC_ABBA_1
0.6507
p.I149M
DO27397
LUSC
ICGC
VVLHID
LIG_APCC_ABBA_1
0.6507
p.G136V
TCGA-D1-A176
UCEC
TCGA
VVLHID
LIG_APCC_ABBA_1
0.0833
p.G136V
DO43947
UCEC
ICGC
VVLHID
LIG_APCC_ABBA_1
0.0833
p.T137S
DO48398
BLCA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.5556
p.E143K
DO222937
BTCA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.2778
p.R155Q
DO222755
COCA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.1944
p.T138A
DO233220
GACA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.5833
p.T138A
DO229208
THCA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.5833
p.P136S
DO233888
GACA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.0833
p.N139S
DO231958
LICA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.1667
p.H148N
DO229024
LICA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.7423
p.T137N
DO229024
LICA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.5556
p.A142D
DO229009
LICA
ICGC
VVLHID
LIG_APCC_ABBA_1
0.25
p.Q149H
DO43202
UCEC
ICGC
VVLHID
LIG_APCC_ABBA_1
0.7582
p.A152V
DO41572
UCEC
ICGC
VVLHID
LIG_APCC_ABBA_1
0.2778
p.H148R
SIDM00189
Melanoma
GDSC
VVLHID
LIG_APCC_ABBA_1
0.8244
p.H148R
ACH-002098
Skin Cancer
CCLE
VVLHID
LIG_APCC_ABBA_1
0.8244
p.H148R
CP67-MEL
skin
COSMIC
VVLHID
LIG_APCC_ABBA_1
0.8244
p.T155M
SIDM00839
Colorectal Carcinoma
GDSC
VVLHID
LIG_APCC_ABBA_1
0.1944
Drug responses associated with ARMC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVLHID
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NVT9
Armadillo repeat-containing protein 1
LIG_APCC_ABBA_1
145:150
VVLHID
APC,CDC20,FZR1
0.6063
More...