DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VVLYDE
Uniprot ID:
Q16828
Source protein:
Dual specificity protein phosphatase 6
Source gene:
DUSP6
Class:
LIG_APCC_ABBA_1
Location:
95:100
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5729
ASA_SCORE:
14.65
COIL:
0.275
CONS_SCORE:
0.4687
DSS_SCORE:
0.3181
HELIX:
0.0147
FCONS_SCORE:
1.5931
RIG_SCORE:
0.845
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D93N
TCGA-AA-3984
COAD
TCGA
VVLYDE
LIG_APCC_ABBA_1
0.2778
p.D93N
DO9002
COAD
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.2778
p.R85L
TCGA-CN-6992
HNSC
TCGA
VVLYDE
LIG_APCC_ABBA_1
0.0556
p.R85L
DO14606
HNSC
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.0556
p.R88L
TCGA-EM-A22J
THCA
TCGA
VVLYDE
LIG_APCC_ABBA_1
0.1389
p.R88L
DO39096
THCA
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.1389
p.T87I
DO234285
ESAD
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.1111
p.D101E
DO229037
LICA
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.3056
p.F106L
DO229008
LICA
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.1667
p.I108N
DO45339
LUAD
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.1111
p.V102M
DO228736
PRAD
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.2778
p.R85C
DO229259
THCA
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.0556
p.P87S
DO43306
UCEC
ICGC
VVLYDE
LIG_APCC_ABBA_1
0.1111
p.E100K
SIDM00003
Melanoma
GDSC
VVLYDE
LIG_APCC_ABBA_1
0.7022
p.E100K
ACH-002159
Skin Cancer
CCLE
VVLYDE
LIG_APCC_ABBA_1
0.7022
p.Y110C
SNU-C5
large_intestine
COSMIC
VVLYDE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with DUSP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVLYDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16828
Dual specificity protein phosphatase 6
LIG_APCC_ABBA_1
95:100
VVLYDE
APC,CDC20,FZR1
0.5729
More...