DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VVPFGE
Uniprot ID:
Q8NDM7
Source protein:
Cilia- and flagella-associated protein 43
Source gene:
CFAP43
Class:
LIG_APCC_ABBA_1
Location:
1328:1333
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9994
ASA_SCORE:
79.85
COIL:
0.7903
CONS_SCORE:
0.3716
DSS_SCORE:
0.4868
HELIX:
0.077
FCONS_SCORE:
1.3156
RIG_SCORE:
0.7266
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1337Y
SIDM00608
Plasma Cell Myeloma
GDSC
VVPFGE
LIG_APCC_ABBA_1
0.2222
p.S1337Y
KMS-11
haematopoietic_and_lymphoid_tissue
COSMIC
VVPFGE
LIG_APCC_ABBA_1
0.2222
p.V1328I
SIDM00680
Colorectal Carcinoma
GDSC
VVPFGE
LIG_APCC_ABBA_1
0.5965
p.V1328I
SIDM01664
Prostate Carcinoma
GDSC
VVPFGE
LIG_APCC_ABBA_1
0.5965
p.V1328I
LS-180
large_intestine
COSMIC
VVPFGE
LIG_APCC_ABBA_1
0.5965
p.T1321A
SIDM00238
Ovarian Carcinoma
GDSC
VVPFGE
LIG_APCC_ABBA_1
0.1389
p.T1321A
OVK-18
ovary
COSMIC
VVPFGE
LIG_APCC_ABBA_1
0.1389
p.S1337P
SIDM00930
Osteosarcoma
GDSC
VVPFGE
LIG_APCC_ABBA_1
0.2222
p.S1337P
CAL-72
bone
COSMIC
VVPFGE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with CFAP43 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVPFGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDM7
Cilia- and flagella-associated protein 43
LIG_APCC_ABBA_1
1328:1333
VVPFGE
APC,CDC20,FZR1
0.9994
More...