DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VVPFRE
Uniprot ID:
Q9BYB0
Source protein:
SH3 and multiple ankyrin repeat domains protein 3
Source gene:
SHANK3
Class:
LIG_APCC_ABBA_1
Location:
343:348
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9995
ASA_SCORE:
79.85
COIL:
0.743
CONS_SCORE:
0.6188
DSS_SCORE:
0.4462
HELIX:
0.1388
FCONS_SCORE:
1.3315
RIG_SCORE:
0.768
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R357Q
TCGA-DF-A2KV
UCEC
TCGA
VVPFRE
LIG_APCC_ABBA_1
0.0833
p.R357Q
DO219771
UCEC
ICGC
VVPFRE
LIG_APCC_ABBA_1
0.0833
p.R357Q
SIDM02015
Colorectal Carcinoma
GDSC
VVPFRE
LIG_APCC_ABBA_1
0.0833
p.V343A
TCGA-EE-A2MI
SKCM
TCGA
VVPFRE
LIG_APCC_ABBA_1
0.6936
p.V343A
DO37531
SKCM
ICGC
VVPFRE
LIG_APCC_ABBA_1
0.6936
p.D340N
TCGA-FS-A1ZM
SKCM
TCGA
VVPFRE
LIG_APCC_ABBA_1
0.25
p.D340N
DO37731
SKCM
ICGC
VVPFRE
LIG_APCC_ABBA_1
0.25
p.R356W
DO230312
COCA
ICGC
VVPFRE
LIG_APCC_ABBA_1
0.1111
p.R356W
DO27803
MALY
ICGC
VVPFRE
LIG_APCC_ABBA_1
0.1111
p.V334D
SIDM00951
T-Lymphoblastic Leukemia
GDSC
VVPFRE
LIG_APCC_ABBA_1
0.0833
p.V334D
ACH-002222
Leukemia
CCLE
VVPFRE
LIG_APCC_ABBA_1
0.0833
p.V334D
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
VVPFRE
LIG_APCC_ABBA_1
0.0833
Drug responses associated with SHANK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVPFRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BYB0
SH3 and multiple ankyrin repeat domains protein 3
LIG_APCC_ABBA_1
343:348
VVPFRE
APC,CDC20,FZR1
0.9995
More...