DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVQTPSPT
Uniprot ID:
Q96KV7
Source protein:
WD repeat-containing protein 90
Source gene:
WDR90
Class:
DEG_SCF_FBW7_1
Location:
272:279
E3 ligase:
FBXW7
DEGRON score:
0.9728
ASA_SCORE:
73.9625
COIL:
0.6789
CONS_SCORE:
0.2724
DSS_SCORE:
0.4916
HELIX:
0.0245
FCONS_SCORE:
0.9128
RIG_SCORE:
0.6516
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P271Q
TCGA-CD-A4MJ
STAD
TCGA
VVQTPSPT
DEG_SCF_FBW7_1
0.3056
p.P271Q
DO47811
STAD
ICGC
VVQTPSPT
DEG_SCF_FBW7_1
0.3056
p.R266W
TCGA-D7-6518
STAD
TCGA
VVQTPSPT
DEG_SCF_FBW7_1
0.1667
p.R266W
DO38519
STAD
ICGC
VVQTPSPT
DEG_SCF_FBW7_1
0.1667
p.R266W
SIDM00217
Colorectal Carcinoma
GDSC
VVQTPSPT
DEG_SCF_FBW7_1
0.1667
p.R266W
SNU-1040
large_intestine
COSMIC
VVQTPSPT
DEG_SCF_FBW7_1
0.1667
p.P288S
TCGA-GF-A6C8
SKCM
TCGA
VVQTPSPT
DEG_SCF_FBW7_1
0.0833
p.P288S
DO48765
SKCM
ICGC
VVQTPSPT
DEG_SCF_FBW7_1
0.0833
p.R283L
TCGA-GN-A26D
SKCM
TCGA
VVQTPSPT
DEG_SCF_FBW7_1
0.2222
p.R283L
DO37480
SKCM
ICGC
VVQTPSPT
DEG_SCF_FBW7_1
0.2222
p.A280V
TCGA-QC-A7B5
SARC
TCGA
VVQTPSPT
DEG_SCF_FBW7_1
0.3056
p.A280V
DO220239
SARC
ICGC
VVQTPSPT
DEG_SCF_FBW7_1
0.3056
p.S277I
DO229038
LICA
ICGC
VVQTPSPT
DEG_SCF_FBW7_1
0.7341
p.L286M
DO229216
THCA
ICGC
VVQTPSPT
DEG_SCF_FBW7_1
0.1389
p.V265L
SIDM00095
Glioblastoma
GDSC
VVQTPSPT
DEG_SCF_FBW7_1
0.1389
p.V265L
ACH-000504
Brain Cancer
CCLE
VVQTPSPT
DEG_SCF_FBW7_1
0.1389
p.V265L
SNB75
central_nervous_system
COSMIC
VVQTPSPT
DEG_SCF_FBW7_1
0.1389
p.T275M
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
VVQTPSPT
DEG_SCF_FBW7_1
0.8534
p.T275M
SIDM01173
Rhabdomyosarcoma
GDSC
VVQTPSPT
DEG_SCF_FBW7_1
0.8534
p.A285T
SIDM00077
Oral Cavity Carcinoma
GDSC
VVQTPSPT
DEG_SCF_FBW7_1
0.1667
p.A285T
BICR10
upper_aerodigestive_tract
COSMIC
VVQTPSPT
DEG_SCF_FBW7_1
0.1667
p.M279T
GP5d
large_intestine
COSMIC
VVQTPSPT
DEG_SCF_FBW7_1
0.7423
p.R275K
MFE-319
endometrium
COSMIC
VVQTPSPT
DEG_SCF_FBW7_1
0.7237
Drug responses associated with WDR90 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVQTPSPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96KV7
WD repeat-containing protein 90
DEG_SCF_FBW7_1
272:279
VVQTPSPT
FBXW7
0.9728
More...