DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVSTPTKS
Uniprot ID:
Q7Z410
Source protein:
Transmembrane protease serine 9
Source gene:
TMPRSS9
Class:
DEG_SCF_FBW7_1
Location:
465:472
E3 ligase:
FBXW7
DEGRON score:
0.8956
ASA_SCORE:
61.025
COIL:
0.7673
CONS_SCORE:
0.4147
DSS_SCORE:
0.5228
HELIX:
0.0985
FCONS_SCORE:
1.0213
RIG_SCORE:
0.693
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E462D
TCGA-B5-A0JY
UCEC
TCGA
VVSTPTKS
DEG_SCF_FBW7_1
0.25
p.E462D
DO43041
UCEC
ICGC
VVSTPTKS
DEG_SCF_FBW7_1
0.25
p.S472L
TCGA-BR-8680
STAD
TCGA
VVSTPTKS
DEG_SCF_FBW7_1
0.7667
p.S472L
TCGA-EO-A22R
UCEC
TCGA
VVSTPTKS
DEG_SCF_FBW7_1
0.7667
p.S472L
DO47769
STAD
ICGC
VVSTPTKS
DEG_SCF_FBW7_1
0.7667
p.S472L
DO42713
UCEC
ICGC
VVSTPTKS
DEG_SCF_FBW7_1
0.7667
p.P469S
TCGA-CU-A0YN
BLCA
TCGA
VVSTPTKS
DEG_SCF_FBW7_1
0.6752
p.P469S
DO488
BLCA
ICGC
VVSTPTKS
DEG_SCF_FBW7_1
0.6752
p.S467N
TCGA-DD-AAVS
LIHC
TCGA
VVSTPTKS
DEG_SCF_FBW7_1
0.5958
p.S467N
DO52279
LIHC
ICGC
VVSTPTKS
DEG_SCF_FBW7_1
0.5958
p.V479M
DO222503
COCA
ICGC
VVSTPTKS
DEG_SCF_FBW7_1
0.1389
p.T470I
DO232838
NACA
ICGC
VVSTPTKS
DEG_SCF_FBW7_1
0.5966
p.T468N
ACH-000251
Lung Cancer
CCLE
VVSTPTKS
DEG_SCF_FBW7_1
0.7055
Drug responses associated with TMPRSS9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSTPTKS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z410
Transmembrane protease serine 9
DEG_SCF_FBW7_1
465:472
VVSTPTKS
FBXW7
0.8956
More...