DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVTPTYS
Uniprot ID:
Q9P2W7
Source protein:
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
Source gene:
B3GAT1
Class:
DEG_SCF_FBW7_1
Location:
88:94
E3 ligase:
FBXW7
DEGRON score:
0.8806
ASA_SCORE:
28.7571
COIL:
0.6676
CONS_SCORE:
0.7431
DSS_SCORE:
0.3252
HELIX:
0.0119
FCONS_SCORE:
1.3241
RIG_SCORE:
0.8091
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R104H
TCGA-06-1806
GBM
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.0556
p.R104H
DO48886
GBM
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.0556
p.R104H
DO23316
LINC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.0556
p.R104H
ACH-001577
Leukemia
CCLE
VVTPTYS
DEG_SCF_FBW7_1
0.0556
p.A100T
TCGA-18-3414
LUSC
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.1667
p.A100T
DO26629
LUSC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.1667
p.R95H
TCGA-19-5956
GBM
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.3056
p.R95H
DO13863
GBM
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.3056
p.T82M
TCGA-55-8089
LUAD
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.1667
p.T82M
DO23690
LUAD
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.1667
p.T103R
TCGA-56-A4BY
LUSC
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.0833
p.T103R
DO45457
LUSC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.0833
p.P78L
TCGA-58-8391
LUSC
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.0556
p.P78L
DO45440
LUSC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.0556
p.T90M
TCGA-A6-4107
COAD
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.7423
p.T90M
DO10566
COAD
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.7423
p.P91S
TCGA-AX-A2HG
UCEC
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.6752
p.P91S
TCGA-BG-A222
UCEC
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.6752
p.P91S
DO42977
UCEC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.6752
p.P91S
DO41337
UCEC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.6752
p.P96L
TCGA-BA-A4IH
HNSC
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.2778
p.P96L
DO52029
HNSC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.2778
p.D81N
TCGA-CG-5721
STAD
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.1389
p.D81N
DO38192
STAD
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.1389
p.D81G
TCGA-DI-A1BU
UCEC
TCGA
VVTPTYS
DEG_SCF_FBW7_1
0.1389
p.D81G
DO42023
UCEC
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.1389
p.W79R
DO50315
ESAD
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.0833
p.H87Q
DO229027
LICA
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.3056
p.T85S
DO222908
MELA
ICGC
VVTPTYS
DEG_SCF_FBW7_1
0.25
p.L102M
SIDM00463
T-Lymphoblastic Leukemia
GDSC
VVTPTYS
DEG_SCF_FBW7_1
0.1111
p.L102M
ACH-000372
Leukemia
CCLE
VVTPTYS
DEG_SCF_FBW7_1
0.1111
p.L102M
P12-ICHIKAWA
haematopoietic_and_lymphoid_tissue
COSMIC
VVTPTYS
DEG_SCF_FBW7_1
0.1111
p.R95C
SIDM01064
Hodgkin's Lymphoma
GDSC
VVTPTYS
DEG_SCF_FBW7_1
0.3056
p.R95C
ACH-000267
Lymphoma
CCLE
VVTPTYS
DEG_SCF_FBW7_1
0.3056
p.R95C
HDLM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VVTPTYS
DEG_SCF_FBW7_1
0.3056
p.P96Q
SIDM00150
Colorectal Carcinoma
GDSC
VVTPTYS
DEG_SCF_FBW7_1
0.2778
p.P96Q
ACH-000969
Colon/Colorectal Cancer
CCLE
VVTPTYS
DEG_SCF_FBW7_1
0.2778
p.P96Q
KM12
large_intestine
COSMIC
VVTPTYS
DEG_SCF_FBW7_1
0.2778
p.T103M
ACH-000007
Colon/Colorectal Cancer
CCLE
VVTPTYS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with B3GAT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTPTYS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2W7
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
DEG_SCF_FBW7_1
88:94
VVTPTYS
FBXW7
0.8806
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