DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VVVHQE
Uniprot ID:
P11171
Source protein:
Protein 4.1
Source gene:
EPB41
Class:
LIG_APCC_ABBA_1
Location:
853:858
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9739
ASA_SCORE:
81.4333
COIL:
0.222
CONS_SCORE:
0.5452
DSS_SCORE:
0.5733
HELIX:
0.0107
FCONS_SCORE:
1.0538
RIG_SCORE:
0.8094
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E860K
TCGA-A5-A0G2
UCEC
TCGA
VVVHQE
LIG_APCC_ABBA_1
0.2778
p.Q857K
TCGA-D3-A2JC
SKCM
TCGA
VVVHQE
LIG_APCC_ABBA_1
0.5833
p.D863G
SIDM01664
Prostate Carcinoma
GDSC
VVVHQE
LIG_APCC_ABBA_1
0.1944
p.D863G
ACH-000952
Prostate Cancer
CCLE
VVVHQE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with EPB41 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVVHQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11171
Protein 4.1
LIG_APCC_ABBA_1
853:858
VVVHQE
APC,CDC20,FZR1
0.9739
More...