DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VYSTT
Uniprot ID:
Q9NP73
Source protein:
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
Source gene:
ALG13
Class:
DEG_SPOP_SBC_1
Location:
809:813
E3 ligase:
SPOP
DEGRON score:
0.5195
ASA_SCORE:
86.12
COIL:
0.8544
CONS_SCORE:
0.3927
DSS_SCORE:
0.4683
HELIX:
0.06
FCONS_SCORE:
1.0006
RIG_SCORE:
0.7452
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R799C
TCGA-EO-A22U
UCEC
TCGA
VYSTT
DEG_SPOP_SBC_1
0.0556
p.R799C
DO222731
MELA
ICGC
VYSTT
DEG_SPOP_SBC_1
0.0556
p.R799C
DO43755
UCEC
ICGC
VYSTT
DEG_SPOP_SBC_1
0.0556
p.Q822H
TCGA-ER-A19P
SKCM
TCGA
VYSTT
DEG_SPOP_SBC_1
0.0833
p.Q822H
DO47623
SKCM
ICGC
VYSTT
DEG_SPOP_SBC_1
0.0833
p.A814S
DO229024
LICA
ICGC
VYSTT
DEG_SPOP_SBC_1
0.3056
p.A800S
DO229026
LICA
ICGC
VYSTT
DEG_SPOP_SBC_1
0.0833
p.S807L
DO45049
LINC
ICGC
VYSTT
DEG_SPOP_SBC_1
0.2778
p.Q822K
SIDM01029
Esophageal Squamous Cell Carcinoma
GDSC
VYSTT
DEG_SPOP_SBC_1
0.0833
p.Q822K
ACH-000873
Esophageal Cancer
CCLE
VYSTT
DEG_SPOP_SBC_1
0.0833
p.Q822K
KYSE-270
oesophagus
COSMIC
VYSTT
DEG_SPOP_SBC_1
0.0833
p.A817E
ACH-001211
Rhabdoid
CCLE
VYSTT
DEG_SPOP_SBC_1
0.2222
p.Y810D
ACH-001977
Primary
CCLE
VYSTT
DEG_SPOP_SBC_1
0.6214
Drug responses associated with ALG13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NP73
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
DEG_SPOP_SBC_1
809:813
VYSTT
SPOP
0.5195
More...