DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VYTPSIS
Uniprot ID:
Q5VV42
Source protein:
Threonylcarbamoyladenosine tRNA methylthiotransferase
Source gene:
CDKAL1
Class:
DEG_SCF_FBW7_1
Location:
497:503
E3 ligase:
FBXW7
DEGRON score:
0.991
ASA_SCORE:
70.6286
COIL:
0.7514
CONS_SCORE:
0.2513
DSS_SCORE:
0.4147
HELIX:
0.115
FCONS_SCORE:
0.7597
RIG_SCORE:
0.7692
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S512L
TCGA-BS-A0UF
UCEC
TCGA
VYTPSIS
DEG_SCF_FBW7_1
0.0833
p.S512L
DO41488
UCEC
ICGC
VYTPSIS
DEG_SCF_FBW7_1
0.0833
p.S512L
SIDM00193
Colorectal Carcinoma
GDSC
VYTPSIS
DEG_SCF_FBW7_1
0.0833
p.S512L
SNU-81
large_intestine
COSMIC
VYTPSIS
DEG_SCF_FBW7_1
0.0833
p.G489R
TCGA-DU-6407
LGG
TCGA
VYTPSIS
DEG_SCF_FBW7_1
0.1111
p.G489R
DO22295
LGG
ICGC
VYTPSIS
DEG_SCF_FBW7_1
0.1111
p.G509E
TCGA-EE-A2MP
SKCM
TCGA
VYTPSIS
DEG_SCF_FBW7_1
0.1667
p.G509E
DO37818
SKCM
ICGC
VYTPSIS
DEG_SCF_FBW7_1
0.1667
p.S493C
DO50454
ESAD
ICGC
VYTPSIS
DEG_SCF_FBW7_1
0.2222
p.Y498C
DO228138
PBCA
ICGC
VYTPSIS
DEG_SCF_FBW7_1
0.5976
p.P491R
SIDM01564
Colorectal Carcinoma
GDSC
VYTPSIS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with CDKAL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYTPSIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VV42
Threonylcarbamoyladenosine tRNA methylthiotransferase
DEG_SCF_FBW7_1
497:503
VYTPSIS
FBXW7
0.991
More...