DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VYTPVAS
Uniprot ID:
Q9NS91
Source protein:
E3 ubiquitin-protein ligase RAD18
Source gene:
RAD18
Class:
DEG_SCF_FBW7_1
Location:
116:122
E3 ligase:
FBXW7
DEGRON score:
0.9988
ASA_SCORE:
79.9857
COIL:
0.7571
CONS_SCORE:
0.3325
DSS_SCORE:
0.311
HELIX:
0.1
FCONS_SCORE:
0.9878
RIG_SCORE:
0.7883
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K110N
TCGA-AG-A002
READ
TCGA
VYTPVAS
DEG_SCF_FBW7_1
0.6111
p.K110N
TCGA-DK-A6AW
BLCA
TCGA
VYTPVAS
DEG_SCF_FBW7_1
0.6111
p.K110N
DO48566
BLCA
ICGC
VYTPVAS
DEG_SCF_FBW7_1
0.6111
p.K110N
DO233718
GACA
ICGC
VYTPVAS
DEG_SCF_FBW7_1
0.6111
p.V120L
TCGA-LN-A9FP
ESCA
TCGA
VYTPVAS
DEG_SCF_FBW7_1
0.5654
p.L112F
DO228215
LICA
ICGC
VYTPVAS
DEG_SCF_FBW7_1
0.2222
p.Q124K
DO228974
LICA
ICGC
VYTPVAS
DEG_SCF_FBW7_1
0.2778
p.T118N
DO229026
LICA
ICGC
VYTPVAS
DEG_SCF_FBW7_1
0.8166
p.G129R
DO222662
MELA
ICGC
VYTPVAS
DEG_SCF_FBW7_1
0.1389
p.P117L
DO218874
SKCA
ICGC
VYTPVAS
DEG_SCF_FBW7_1
0.7582
p.A125S
SIDM02039
Colorectal Carcinoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.6944
p.K110E
SIDM00967
Ovarian Carcinoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.6111
p.Y117C
SIDM00535
Chondrosarcoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.5976
p.Y117C
SIDM00293
Small Cell Lung Carcinoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.5976
p.Y117C
SIDM00619
Thyroid Gland Carcinoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.5976
p.Y117C
SIDM00384
B-Cell Non-Hodgkin's Lymphoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.5976
p.Y117C
SIDM00324
Neuroblastoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.5976
p.Y117C
SIDM00289
B-Lymphoblastic Leukemia
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.5976
p.G129E
SIDM00516
Melanoma
GDSC
VYTPVAS
DEG_SCF_FBW7_1
0.1389
p.G129E
ACH-002166
Skin Cancer
CCLE
VYTPVAS
DEG_SCF_FBW7_1
0.1389
p.G129E
MZ7-mel
skin
COSMIC
VYTPVAS
DEG_SCF_FBW7_1
0.1389
p.T118A
ACH-002309
Sarcoma
CCLE
VYTPVAS
DEG_SCF_FBW7_1
0.825
p.T118A
SW684
soft_tissue
COSMIC
VYTPVAS
DEG_SCF_FBW7_1
0.825
p.Y110C
SW684
soft_tissue
COSMIC
VYTPVAS
DEG_SCF_FBW7_1
0.6111
Drug responses associated with RAD18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYTPVAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NS91
E3 ubiquitin-protein ligase RAD18
DEG_SCF_FBW7_1
116:122
VYTPVAS
FBXW7
0.9988
More...