DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
WPGASVWPS
Uniprot ID:
Q9BZB8
Source protein:
Cytoplasmic polyadenylation element-binding protein 1
Source gene:
CPEB1
Class:
DEG_SIAH_1
Location:
254:262
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9725
ASA_SCORE:
52.0889
COIL:
0.8621
CONS_SCORE:
0.3051
DSS_SCORE:
0.406
HELIX:
0.0949
FCONS_SCORE:
0.9047
RIG_SCORE:
0.7163
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P272H
TCGA-55-7913
LUAD
TCGA
WPGASVWPS
DEG_SIAH_1
0.0556
p.S258F
TCGA-AX-A2HC
UCEC
TCGA
WPGASVWPS
DEG_SIAH_1
0.6871
p.S249R
TCGA-C8-A138
BRCA
TCGA
WPGASVWPS
DEG_SIAH_1
0.1944
p.A250T
TCGA-EO-A22R
UCEC
TCGA
WPGASVWPS
DEG_SIAH_1
0.2222
p.R253T
TCGA-IR-A3LK
CESC
TCGA
WPGASVWPS
DEG_SIAH_1
0.3056
p.V253G
DO1285
BRCA
ICGC
WPGASVWPS
DEG_SIAH_1
0.3056
p.F259V
DO8842
COAD
ICGC
WPGASVWPS
DEG_SIAH_1
0.7068
p.G260S
DO23292
LINC
ICGC
WPGASVWPS
DEG_SIAH_1
0.6993
p.G271S
DO47331
SKCM
ICGC
WPGASVWPS
DEG_SIAH_1
0.0833
p.G256E
SIDM00504
Glioma
GDSC
WPGASVWPS
DEG_SIAH_1
0.6087
p.G256E
MOG-G-UVW
central_nervous_system
COSMIC
WPGASVWPS
DEG_SIAH_1
0.6087
p.G255R
ACH-000196
Breast Cancer
CCLE
WPGASVWPS
DEG_SIAH_1
0.7568
p.G255R
HCC1599
breast
COSMIC
WPGASVWPS
DEG_SIAH_1
0.7568
p.A269V
ACH-000973
Bladder Cancer
CCLE
WPGASVWPS
DEG_SIAH_1
0.1389
p.A269V
639-V
urinary_tract
COSMIC
WPGASVWPS
DEG_SIAH_1
0.1389
p.G259E
MOG-G-UVW
central_nervous_system
COSMIC
WPGASVWPS
DEG_SIAH_1
0.7199
Drug responses associated with CPEB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of WPGASVWPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BZB8
Cytoplasmic polyadenylation element-binding protein 1
DEG_SIAH_1
254:262
WPGASVWPS
SIAH1,SIAH2,SIAH3
0.9725
More...