DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
WREPLPAVD
Uniprot ID:
Q9BQK8
Source protein:
Phosphatidate phosphatase LPIN3
Source gene:
LPIN3
Class:
DEG_APCC_DBOX_1
Location:
838:846
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8889
ASA_SCORE:
73.0778
COIL:
0.8956
CONS_SCORE:
0.4122
DSS_SCORE:
0.2954
HELIX:
0.0219
FCONS_SCORE:
1.0438
RIG_SCORE:
0.839
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y832H
TCGA-86-A4JF
LUAD
TCGA
WREPLPAVD
DEG_APCC_DBOX_1
0.1667
p.Y832H
DO45317
LUAD
ICGC
WREPLPAVD
DEG_APCC_DBOX_1
0.1667
p.L847I
TCGA-AX-A2HD
UCEC
TCGA
WREPLPAVD
DEG_APCC_DBOX_1
0.3056
p.L847I
DO42608
UCEC
ICGC
WREPLPAVD
DEG_APCC_DBOX_1
0.3056
p.A828T
TCGA-CD-A4MG
STAD
TCGA
WREPLPAVD
DEG_APCC_DBOX_1
0.0556
p.A828T
DO48009
STAD
ICGC
WREPLPAVD
DEG_APCC_DBOX_1
0.0556
p.A828D
DO228589
LICA
ICGC
WREPLPAVD
DEG_APCC_DBOX_1
0.0556
p.V846M
SIDM01293
Colorectal Carcinoma
GDSC
WREPLPAVD
DEG_APCC_DBOX_1
0.7208
p.A845T
SIDM01090
Colorectal Carcinoma
GDSC
WREPLPAVD
DEG_APCC_DBOX_1
0.7139
p.A845T
RKO
large_intestine
COSMIC
WREPLPAVD
DEG_APCC_DBOX_1
0.7139
p.L847V
ACH-000436
Myeloma
CCLE
WREPLPAVD
DEG_APCC_DBOX_1
0.3056
p.A844T
ACH-000943
Colon/Colorectal Cancer
CCLE
WREPLPAVD
DEG_APCC_DBOX_1
0.6028
p.A844T
RKO
large_intestine
COSMIC
WREPLPAVD
DEG_APCC_DBOX_1
0.6028
Drug responses associated with LPIN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of WREPLPAVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BQK8
Phosphatidate phosphatase LPIN3
DEG_APCC_DBOX_1
838:846
WREPLPAVD
APC,CDC20,FZR1
0.8889
More...