DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YGLSNFYQNHRRY
Uniprot ID:
Q9NV96
Source protein:
Cell cycle control protein 50A
Source gene:
TMEM30A
Class:
DEG_CRL4_CDT2_1
Location:
122:134
E3 ligase:
DTL
DEGRON score:
0.6166
ASA_SCORE:
54.8846
COIL:
0.3973
CONS_SCORE:
0.8139
DSS_SCORE:
0.1545
HELIX:
0.0727
FCONS_SCORE:
1.4279
RIG_SCORE:
0.8465
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R133H
TCGA-AJ-A3EK
UCEC
TCGA
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.8244
p.R133H
TCGA-B5-A3FA
UCEC
TCGA
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.8244
p.V135M
TCGA-DD-AACN
LIHC
TCGA
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.3056
p.N144H
TCGA-E6-A1LX
UCEC
TCGA
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.0556
p.G116C
TCGA-EB-A299
SKCM
TCGA
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.1667
p.G116C
TCGA-ER-A19B
SKCM
TCGA
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.1667
p.K112M
TCGA-MH-A561
KIRP
TCGA
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.1667
p.K112M
DO48509
KIRP
ICGC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.1667
p.P131T
DO14566
HNSC
ICGC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.7031
p.L114F
DO231186
LUSC
ICGC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.1111
p.R126I
DO50076
UCEC
ICGC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.8102
p.C121R
DO50078
UCEC
ICGC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.3056
p.G123E
SIDM02039
Colorectal Carcinoma
GDSC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.6087
p.V118M
SIDM01007
T-Lymphoblastic Leukemia
GDSC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.2222
p.V118M
ACH-002256
Leukemia
CCLE
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.2222
p.V118M
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.2222
p.G116D
SIDM01588
Endometrial Carcinoma
GDSC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.1667
p.F133L
CW-2
large_intestine
COSMIC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.6981
p.S141N
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.1389
p.S126P
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.6752
p.R143H
SNU-1040
large_intestine
COSMIC
YGLSNFYQNHRRY
DEG_CRL4_CDT2_1
0.0833
Drug responses associated with TMEM30A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YGLSNFYQNHRRY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NV96
Cell cycle control protein 50A
DEG_CRL4_CDT2_1
122:134
YGLSNFYQNHRRY
DTL
0.6166
More...