DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YPRAPVFPG
Uniprot ID:
Q00839
Source protein:
Heterogeneous nuclear ribonucleoprotein U
Source gene:
HNRNPU
Class:
DEG_SIAH_1
Location:
753:761
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.996
ASA_SCORE:
75.1556
COIL:
0.9548
CONS_SCORE:
0.386
DSS_SCORE:
0.4919
HELIX:
0.018
FCONS_SCORE:
0.8522
RIG_SCORE:
0.7126
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G763V
TCGA-23-2649
OV
TCGA
YPRAPVFPG
DEG_SIAH_1
0.2778
p.G763V
DO31779
OV
ICGC
YPRAPVFPG
DEG_SIAH_1
0.2778
p.G744V
TCGA-55-8299
LUAD
TCGA
YPRAPVFPG
DEG_SIAH_1
0.0833
p.G744V
DO25927
LUAD
ICGC
YPRAPVFPG
DEG_SIAH_1
0.0833
p.G745R
TCGA-CR-7402
HNSC
TCGA
YPRAPVFPG
DEG_SIAH_1
0.1111
p.G745R
DO15727
HNSC
ICGC
YPRAPVFPG
DEG_SIAH_1
0.1111
p.P757L
TCGA-L5-A4OP
ESCA
TCGA
YPRAPVFPG
DEG_SIAH_1
0.6471
p.Y765H
TCGA-MH-A562
KIRP
TCGA
YPRAPVFPG
DEG_SIAH_1
0.2222
p.Y765H
DO48495
KIRP
ICGC
YPRAPVFPG
DEG_SIAH_1
0.2222
p.G750S
DO222455
ESCA
ICGC
YPRAPVFPG
DEG_SIAH_1
0.25
p.G750S
DO232761
PBCA
ICGC
YPRAPVFPG
DEG_SIAH_1
0.25
p.A756S
DO228917
LICA
ICGC
YPRAPVFPG
DEG_SIAH_1
0.7588
p.R755S
DO229027
LICA
ICGC
YPRAPVFPG
DEG_SIAH_1
0.6316
p.R755S
DO231201
LUSC
ICGC
YPRAPVFPG
DEG_SIAH_1
0.6316
p.R762C
DO229052
LICA
ICGC
YPRAPVFPG
DEG_SIAH_1
0.3056
p.Y765S
DO220850
MELA
ICGC
YPRAPVFPG
DEG_SIAH_1
0.2222
p.G761D
DO229213
THCA
ICGC
YPRAPVFPG
DEG_SIAH_1
0.6087
Drug responses associated with HNRNPU mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YPRAPVFPG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q00839
Heterogeneous nuclear ribonucleoprotein U
DEG_SIAH_1
753:761
YPRAPVFPG
SIAH1,SIAH2,SIAH3
0.996
More...