DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YRDCLQALK
Uniprot ID:
Q8N3Y3
Source protein:
Xylosyl- and glucuronyltransferase LARGE2
Source gene:
LARGE2
Class:
DEG_APCC_DBOX_1
Location:
682:690
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8301
ASA_SCORE:
44.6111
COIL:
0.0149
CONS_SCORE:
0.3529
DSS_SCORE:
0.3031
HELIX:
0.9837
FCONS_SCORE:
1.1735
RIG_SCORE:
0.7936
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R677C
SIDM01004
Chronic Myelogenous Leukemia
GDSC
YRDCLQALK
DEG_APCC_DBOX_1
0.1944
p.R677C
SIDM01450
Gastric Carcinoma
GDSC
YRDCLQALK
DEG_APCC_DBOX_1
0.1944
p.R677C
SIDM01782
Oral Cavity Carcinoma
GDSC
YRDCLQALK
DEG_APCC_DBOX_1
0.1944
p.A688T
SIDM00516
Melanoma
GDSC
YRDCLQALK
DEG_APCC_DBOX_1
0.6028
p.A688T
SIDM01879
Non-Cancerous
GDSC
YRDCLQALK
DEG_APCC_DBOX_1
0.6028
p.L686R
SIDM00954
Breast Carcinoma
GDSC
YRDCLQALK
DEG_APCC_DBOX_1
0.8428
p.L686R
COLO-824
breast
COSMIC
YRDCLQALK
DEG_APCC_DBOX_1
0.8428
p.T681N
SIDM00167
Head and Neck Carcinoma
GDSC
YRDCLQALK
DEG_APCC_DBOX_1
0.75
p.A680T
DBTRG-05MG
central_nervous_system
COSMIC
YRDCLQALK
DEG_APCC_DBOX_1
0.2778
p.K676R
SNU-61
large_intestine
COSMIC
YRDCLQALK
DEG_APCC_DBOX_1
0.1667
Drug responses associated with LARGE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRDCLQALK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3Y3
Xylosyl- and glucuronyltransferase LARGE2
DEG_APCC_DBOX_1
682:690
YRDCLQALK
APC,CDC20,FZR1
0.8301
More...