DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YRGALWILG
Uniprot ID:
P53618
Source protein:
Coatomer subunit beta
Source gene:
COPB1
Class:
DEG_APCC_DBOX_1
Location:
455:463
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.746
ASA_SCORE:
12.1667
COIL:
0.0153
CONS_SCORE:
0.5685
DSS_SCORE:
0.0148
HELIX:
0.98
FCONS_SCORE:
1.2848
RIG_SCORE:
0.9323
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L462M
TCGA-A5-A1OF
UCEC
TCGA
YRGALWILG
DEG_APCC_DBOX_1
0.5999
p.L462M
DO42568
UCEC
ICGC
YRGALWILG
DEG_APCC_DBOX_1
0.5999
p.T468A
TCGA-DF-A2KU
UCEC
TCGA
YRGALWILG
DEG_APCC_DBOX_1
0.6389
p.T468A
DO223286
UCEC
ICGC
YRGALWILG
DEG_APCC_DBOX_1
0.6389
p.W460L
TCGA-FI-A2D5
UCEC
TCGA
YRGALWILG
DEG_APCC_DBOX_1
0.5904
p.W460L
DO41331
UCEC
ICGC
YRGALWILG
DEG_APCC_DBOX_1
0.5904
p.S451C
TCGA-HE-7130
KIRP
TCGA
YRGALWILG
DEG_APCC_DBOX_1
0.6667
p.S451C
DO20776
KIRP
ICGC
YRGALWILG
DEG_APCC_DBOX_1
0.6667
p.A448V
TCGA-W3-AA1V
SKCM
TCGA
YRGALWILG
DEG_APCC_DBOX_1
0.1389
p.A448V
DO51276
SKCM
ICGC
YRGALWILG
DEG_APCC_DBOX_1
0.1389
p.Q473H
DO1076
BRCA
ICGC
YRGALWILG
DEG_APCC_DBOX_1
0.0556
p.E470K
SIDM01171
Glioblastoma
GDSC
YRGALWILG
DEG_APCC_DBOX_1
0.1389
p.E470K
ACH-000571
Brain Cancer
CCLE
YRGALWILG
DEG_APCC_DBOX_1
0.1389
p.E470K
T98G
central_nervous_system
COSMIC
YRGALWILG
DEG_APCC_DBOX_1
0.1389
p.K450Q
ACH-000773
Lymphoma
CCLE
YRGALWILG
DEG_APCC_DBOX_1
0.3056
Drug responses associated with COPB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRGALWILG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P53618
Coatomer subunit beta
DEG_APCC_DBOX_1
455:463
YRGALWILG
APC,CDC20,FZR1
0.746
More...