DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
YRGRLSYLP
Uniprot ID:
Q9NRA0
Source protein:
Sphingosine kinase 2
Source gene:
SPHK2
Class:
DEG_APCC_DBOX_1
Location:
372:380
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9587
ASA_SCORE:
34.5778
COIL:
0.1432
CONS_SCORE:
0.6232
DSS_SCORE:
0.2506
HELIX:
0.0086
FCONS_SCORE:
1.4551
RIG_SCORE:
0.7852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R375H
TCGA-AX-A2HD
UCEC
TCGA
YRGRLSYLP
DEG_APCC_DBOX_1
0.7133
p.P380H
TCGA-D3-A2JD
SKCM
TCGA
YRGRLSYLP
DEG_APCC_DBOX_1
0.6583
p.R373C
TCGA-ZF-AA4V
BLCA
TCGA
YRGRLSYLP
DEG_APCC_DBOX_1
0.8301
p.R380H
DO219018
BLCA
ICGC
YRGRLSYLP
DEG_APCC_DBOX_1
0.8244
p.L387V
DO516
BLCA
ICGC
YRGRLSYLP
DEG_APCC_DBOX_1
0.5833
p.L387F
DO1663
BRCA
ICGC
YRGRLSYLP
DEG_APCC_DBOX_1
0.5833
p.D368Y
DO44449
HNSC
ICGC
YRGRLSYLP
DEG_APCC_DBOX_1
0.6667
p.D384E
DO23204
LINC
ICGC
YRGRLSYLP
DEG_APCC_DBOX_1
0.2222
p.L385V
SNU-175
large_intestine
COSMIC
YRGRLSYLP
DEG_APCC_DBOX_1
0.1944
Drug responses associated with SPHK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRGRLSYLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NRA0
Sphingosine kinase 2
DEG_APCC_DBOX_1
372:380
YRGRLSYLP
APC,CDC20,FZR1
0.9587
More...