DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
YRINLSVLG
Uniprot ID:
Q14147
Source protein:
Probable ATP-dependent RNA helicase DHX34
Source gene:
DHX34
Class:
DEG_APCC_DBOX_1
Location:
104:112
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8043
ASA_SCORE:
54.5333
COIL:
0.5956
CONS_SCORE:
0.3743
DSS_SCORE:
0.4174
HELIX:
0.3539
FCONS_SCORE:
1.1067
RIG_SCORE:
0.7738
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R98H
TCGA-44-6778
LUAD
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.1667
p.R98H
DO25603
LUAD
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.1667
p.R103C
TCGA-AX-A1CE
UCEC
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.3056
p.R103C
DO42280
UCEC
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.3056
p.R105H
TCGA-B5-A1MW
UCEC
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.8244
p.R105H
DO42913
UCEC
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.8244
p.S109F
TCGA-BB-4225
HNSC
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.6871
p.S109F
DO14264
HNSC
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.6871
p.D101E
TCGA-BK-A0C9
UCEC
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.25
p.D101E
DO41253
UCEC
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.25
p.D101N
TCGA-D1-A17Q
UCEC
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.25
p.D101N
DO41903
UCEC
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.25
p.T115M
TCGA-G2-A2EO
BLCA
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.6944
p.T115M
DO456
BLCA
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.6944
p.R116Q
TCGA-PG-A6IB
UCEC
TCGA
YRINLSVLG
DEG_APCC_DBOX_1
0.2222
p.R116Q
DO52419
UCEC
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.2222
p.R116W
DO230326
COCA
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.2222
p.Y104C
DO234168
ESAD
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.5976
p.L111F
DO227531
PACA
ICGC
YRINLSVLG
DEG_APCC_DBOX_1
0.6981
p.G117D
SIDM00855
Other Sarcomas
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1944
p.G117D
SIDM00032
Bladder Carcinoma
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1944
p.G117D
SIDM00539
Esophageal Carcinoma
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1944
p.G117D
SIDM00097
Breast Carcinoma
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1944
p.G117D
SIDM00257
Neuroblastoma
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1944
p.G117D
SIDM00490
Glioma
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1944
p.G117D
SIDM01387
Small Cell Lung Carcinoma
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1944
p.R98C
SIDM00298
Squamous Cell Lung Carcinoma
GDSC
YRINLSVLG
DEG_APCC_DBOX_1
0.1667
p.R98C
ACH-000705
Lung Cancer
CCLE
YRINLSVLG
DEG_APCC_DBOX_1
0.1667
p.R98C
ACH-001113
Lung Cancer
CCLE
YRINLSVLG
DEG_APCC_DBOX_1
0.1667
p.R98C
ACH-002156
Lung Cancer
CCLE
YRINLSVLG
DEG_APCC_DBOX_1
0.1667
p.R98C
LC-1-sq
lung
COSMIC
YRINLSVLG
DEG_APCC_DBOX_1
0.1667
Drug responses associated with DHX34 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRINLSVLG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14147
Probable ATP-dependent RNA helicase DHX34
DEG_APCC_DBOX_1
104:112
YRINLSVLG
APC,CDC20,FZR1
0.8043
More...