DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YRLYLDELE
Uniprot ID:
Q9HD26
Source protein:
Golgi-associated PDZ and coiled-coil motif-containing protein
Source gene:
GOPC
Class:
DEG_APCC_DBOX_1
Location:
391:399
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8617
ASA_SCORE:
89.3222
COIL:
0.4831
CONS_SCORE:
0.4643
DSS_SCORE:
0.456
HELIX:
0.2059
FCONS_SCORE:
0.9961
RIG_SCORE:
0.803
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G402D
TCGA-A5-A0G2
UCEC
TCGA
YRLYLDELE
DEG_APCC_DBOX_1
0.25
p.V381I
TCGA-A6-2681
COAD
TCGA
YRLYLDELE
DEG_APCC_DBOX_1
0.0556
p.V381I
SIDM02059
Colorectal Carcinoma
GDSC
YRLYLDELE
DEG_APCC_DBOX_1
0.0556
p.V381I
SIDM01178
Other Solid Cancers
GDSC
YRLYLDELE
DEG_APCC_DBOX_1
0.0556
p.V381I
SIDM00168
Head and Neck Carcinoma
GDSC
YRLYLDELE
DEG_APCC_DBOX_1
0.0556
p.V381I
SW962
vulva
COSMIC
YRLYLDELE
DEG_APCC_DBOX_1
0.0556
p.R392S
TCGA-BF-A1Q0
SKCM
TCGA
YRLYLDELE
DEG_APCC_DBOX_1
0.7427
p.G405C
TCGA-D3-A2JO
SKCM
TCGA
YRLYLDELE
DEG_APCC_DBOX_1
0.1667
p.G405C
DO47619
SKCM
ICGC
YRLYLDELE
DEG_APCC_DBOX_1
0.1667
p.D385N
TCGA-XF-A9T0
BLCA
TCGA
YRLYLDELE
DEG_APCC_DBOX_1
0.1667
p.D402E
DO229035
LICA
ICGC
YRLYLDELE
DEG_APCC_DBOX_1
0.25
p.G393S
DO222413
MELA
ICGC
YRLYLDELE
DEG_APCC_DBOX_1
0.6993
p.R384S
DO47374
SKCM
ICGC
YRLYLDELE
DEG_APCC_DBOX_1
0.1389
p.G394D
DO41235
UCEC
ICGC
YRLYLDELE
DEG_APCC_DBOX_1
0.7198
p.R392H
SIDM01027
Esophageal Squamous Cell Carcinoma
GDSC
YRLYLDELE
DEG_APCC_DBOX_1
0.8244
p.K408N
ACH-000679
Esophageal Cancer
CCLE
YRLYLDELE
DEG_APCC_DBOX_1
0.0833
p.K408N
OE19
oesophagus
COSMIC
YRLYLDELE
DEG_APCC_DBOX_1
0.0833
p.R384C
ACH-000887
Brain Cancer
CCLE
YRLYLDELE
DEG_APCC_DBOX_1
0.1389
p.S404N
ACH-000966
Ovarian Cancer
CCLE
YRLYLDELE
DEG_APCC_DBOX_1
0.1944
p.S404N
IGROV-1
ovary
COSMIC
YRLYLDELE
DEG_APCC_DBOX_1
0.1944
p.R382C
ACH-000991
Colon/Colorectal Cancer
CCLE
YRLYLDELE
DEG_APCC_DBOX_1
0.0833
p.R382C
SNU-81
large_intestine
COSMIC
YRLYLDELE
DEG_APCC_DBOX_1
0.0833
Drug responses associated with GOPC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRLYLDELE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HD26
Golgi-associated PDZ and coiled-coil motif-containing protein
DEG_APCC_DBOX_1
391:399
YRLYLDELE
APC,CDC20,FZR1
0.8617
More...