DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YRNSLATVE
Uniprot ID:
Q9GZV8
Source protein:
PR domain zinc finger protein 14
Source gene:
PRDM14
Class:
DEG_APCC_DBOX_1
Location:
39:47
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7365
ASA_SCORE:
56.2667
COIL:
0.4944
CONS_SCORE:
0.3699
DSS_SCORE:
0.3615
HELIX:
0.4399
FCONS_SCORE:
0.9829
RIG_SCORE:
0.765
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L43M
TCGA-62-A46P
LUAD
TCGA
YRNSLATVE
DEG_APCC_DBOX_1
0.711
p.L43M
DO25767
LUAD
ICGC
YRNSLATVE
DEG_APCC_DBOX_1
0.711
p.R54W
TCGA-AD-A5EJ
COAD
TCGA
YRNSLATVE
DEG_APCC_DBOX_1
0.1389
p.R54W
DO50090
COAD
ICGC
YRNSLATVE
DEG_APCC_DBOX_1
0.1389
p.E47K
DO231559
LINC
ICGC
YRNSLATVE
DEG_APCC_DBOX_1
0.591
p.T45S
DO230968
LUSC
ICGC
YRNSLATVE
DEG_APCC_DBOX_1
0.6005
p.T45S
DO224621
LUSC
ICGC
YRNSLATVE
DEG_APCC_DBOX_1
0.6005
p.D49E
DO231127
LUSC
ICGC
YRNSLATVE
DEG_APCC_DBOX_1
0.2778
p.F53C
SIDM00962
Chronic Myelogenous Leukemia
GDSC
YRNSLATVE
DEG_APCC_DBOX_1
0.1667
p.F53C
SIDM01154
T-Lymphoblastic Leukemia
GDSC
YRNSLATVE
DEG_APCC_DBOX_1
0.1667
p.F53C
SIDM01566
Hodgkin's Lymphoma
GDSC
YRNSLATVE
DEG_APCC_DBOX_1
0.1667
p.R54Q
SIDM01112
Osteosarcoma
GDSC
YRNSLATVE
DEG_APCC_DBOX_1
0.1389
p.Y36H
ACH-000219
Skin Cancer
CCLE
YRNSLATVE
DEG_APCC_DBOX_1
0.25
p.Y36H
ACH-002001
Skin Cancer
CCLE
YRNSLATVE
DEG_APCC_DBOX_1
0.25
p.Y36H
ACH-002002
Skin Cancer
CCLE
YRNSLATVE
DEG_APCC_DBOX_1
0.25
p.Y36H
ACH-002003
Skin Cancer
CCLE
YRNSLATVE
DEG_APCC_DBOX_1
0.25
Drug responses associated with PRDM14 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRNSLATVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9GZV8
PR domain zinc finger protein 14
DEG_APCC_DBOX_1
39:47
YRNSLATVE
APC,CDC20,FZR1
0.7365
More...