DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YRQKLEAMT
Uniprot ID:
Q06547
Source protein:
GA-binding protein subunit beta-1
Source gene:
GABPB1
Class:
DEG_APCC_DBOX_1
Location:
378:386
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6095
ASA_SCORE:
89.6444
COIL:
0.065
CONS_SCORE:
0.6019
DSS_SCORE:
0.4251
HELIX:
0.9363
FCONS_SCORE:
1.0948
RIG_SCORE:
0.7915
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R387H
TCGA-63-A5MW
LUSC
TCGA
YRQKLEAMT
DEG_APCC_DBOX_1
0.3056
p.R387H
TCGA-B5-A1MR
UCEC
TCGA
YRQKLEAMT
DEG_APCC_DBOX_1
0.3056
p.R387H
TCGA-CG-4306
STAD
TCGA
YRQKLEAMT
DEG_APCC_DBOX_1
0.3056
p.Q373K
TCGA-73-A9RS
LUAD
TCGA
YRQKLEAMT
DEG_APCC_DBOX_1
0.1944
p.R387C
TCGA-B5-A11E
UCEC
TCGA
YRQKLEAMT
DEG_APCC_DBOX_1
0.3056
p.A384V
TCGA-DU-6392
LGG
TCGA
YRQKLEAMT
DEG_APCC_DBOX_1
0.5825
p.E376D
TCGA-EO-A22U
UCEC
TCGA
YRQKLEAMT
DEG_APCC_DBOX_1
0.2778
p.A372V
DO22237
LGG
ICGC
YRQKLEAMT
DEG_APCC_DBOX_1
0.1667
p.R375H
DO219169
LUSC
ICGC
YRQKLEAMT
DEG_APCC_DBOX_1
0.25
p.R375H
DO38567
STAD
ICGC
YRQKLEAMT
DEG_APCC_DBOX_1
0.25
p.R375H
DO41758
UCEC
ICGC
YRQKLEAMT
DEG_APCC_DBOX_1
0.25
p.R375C
DO41644
UCEC
ICGC
YRQKLEAMT
DEG_APCC_DBOX_1
0.25
p.K370N
SIDM00588
Oral Cavity Carcinoma
GDSC
YRQKLEAMT
DEG_APCC_DBOX_1
0.2222
p.K370N
HSC-4
upper_aerodigestive_tract
COSMIC
YRQKLEAMT
DEG_APCC_DBOX_1
0.2222
p.A377D
SIDM01007
T-Lymphoblastic Leukemia
GDSC
YRQKLEAMT
DEG_APCC_DBOX_1
0.3056
p.A377D
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
YRQKLEAMT
DEG_APCC_DBOX_1
0.3056
p.R387L
ACH-000976
Bile Duct Cancer
CCLE
YRQKLEAMT
DEG_APCC_DBOX_1
0.3056
Drug responses associated with GABPB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRQKLEAMT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q06547
GA-binding protein subunit beta-1
DEG_APCC_DBOX_1
378:386
YRQKLEAMT
APC,CDC20,FZR1
0.6095
More...