DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
YRSTLRTLP
Uniprot ID:
Q14003
Source protein:
Potassium voltage-gated channel subfamily C member 3
Source gene:
KCNC3
Class:
DEG_APCC_DBOX_1
Location:
102:110
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9941
ASA_SCORE:
58.5444
COIL:
0.3752
CONS_SCORE:
0.601
DSS_SCORE:
0.4393
HELIX:
0.5298
FCONS_SCORE:
1.1996
RIG_SCORE:
0.8048
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R98H
TCGA-JW-A69B
CESC
TCGA
YRSTLRTLP
DEG_APCC_DBOX_1
0.2222
p.R98H
DO49977
CESC
ICGC
YRSTLRTLP
DEG_APCC_DBOX_1
0.2222
p.P120T
DO230326
COCA
ICGC
YRSTLRTLP
DEG_APCC_DBOX_1
0.0556
p.P114L
DO233732
GACA
ICGC
YRSTLRTLP
DEG_APCC_DBOX_1
0.2222
p.P115L
DO228435
MALY
ICGC
YRSTLRTLP
DEG_APCC_DBOX_1
0.1944
p.S117F
DO232555
PBCA
ICGC
YRSTLRTLP
DEG_APCC_DBOX_1
0.1389
p.R107G
DO229499
SKCA
ICGC
YRSTLRTLP
DEG_APCC_DBOX_1
0.6457
p.T105M
DO229245
THCA
ICGC
YRSTLRTLP
DEG_APCC_DBOX_1
0.6312
p.L114M
SIDM00403
T-Lymphoblastic Leukemia
GDSC
YRSTLRTLP
DEG_APCC_DBOX_1
0.2222
p.L114M
ACH-000636
Leukemia
CCLE
YRSTLRTLP
DEG_APCC_DBOX_1
0.2222
p.Y102C
SIDM01007
T-Lymphoblastic Leukemia
GDSC
YRSTLRTLP
DEG_APCC_DBOX_1
0.7087
p.V97M
SIDM00946
T-Lymphoblastic Leukemia
GDSC
YRSTLRTLP
DEG_APCC_DBOX_1
0.1944
Drug responses associated with KCNC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRSTLRTLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14003
Potassium voltage-gated channel subfamily C member 3
DEG_APCC_DBOX_1
102:110
YRSTLRTLP
APC,CDC20,FZR1
0.9941
More...