DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YRTKLRGLY
Uniprot ID:
Q96ES7
Source protein:
SAGA-associated factor 29
Source gene:
SGF29
Class:
DEG_APCC_DBOX_1
Location:
55:63
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6222
ASA_SCORE:
55.7111
COIL:
0.0381
CONS_SCORE:
0.4384
DSS_SCORE:
0.2879
HELIX:
0.9601
FCONS_SCORE:
1.1757
RIG_SCORE:
0.8195
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R60C
SIDM01293
Colorectal Carcinoma
GDSC
YRTKLRGLY
DEG_APCC_DBOX_1
0.719
p.R60C
SIDM01088
Endometrial Carcinoma
GDSC
YRTKLRGLY
DEG_APCC_DBOX_1
0.719
p.R60C
RL95-2
endometrium
COSMIC
YRTKLRGLY
DEG_APCC_DBOX_1
0.719
p.R60H
SIDM00118
Colorectal Carcinoma
GDSC
YRTKLRGLY
DEG_APCC_DBOX_1
0.7133
p.R60H
HCC2998
large_intestine
COSMIC
YRTKLRGLY
DEG_APCC_DBOX_1
0.7133
p.A66T
SIDM01618
B-Lymphoblastic Leukemia
GDSC
YRTKLRGLY
DEG_APCC_DBOX_1
0.25
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Drug responses associated with SGF29 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of YRTKLRGLY
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96ES7
SAGA-associated factor 29
DEG_APCC_DBOX_1
55:63
YRTKLRGLY
APC,CDC20,FZR1
0.6222
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