DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YRYALQDMD
Uniprot ID:
Q9HCL0
Source protein:
Protocadherin-18
Source gene:
PCDH18
Class:
DEG_APCC_DBOX_1
Location:
858:866
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6463
ASA_SCORE:
66.3444
COIL:
0.5708
CONS_SCORE:
0.5153
DSS_SCORE:
0.3931
HELIX:
0.2618
FCONS_SCORE:
1.0107
RIG_SCORE:
0.799
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L862F
TCGA-33-AASB
LUSC
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.6981
p.A861S
TCGA-62-A46O
LUAD
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.6477
p.S857G
TCGA-AG-3906
READ
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.3056
p.S848R
TCGA-AH-6903
READ
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.0556
p.Q863R
TCGA-AX-A3FS
UCEC
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.6218
p.S855F
TCGA-EE-A3AA
SKCM
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.25
p.S848G
TCGA-HU-A4H6
STAD
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.0556
p.R850Q
TCGA-W3-AA1O
SKCM
TCGA
YRYALQDMD
DEG_APCC_DBOX_1
0.1111
p.K870T
DO222762
COCA
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.2222
p.Y853F
DO233271
GACA
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.3056
p.D865E
DO228974
LICA
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.6758
p.R849Q
DO45045
LINC
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.0833
p.R849Q
DO51274
SKCM
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.0833
p.A860S
DO26240
LUAD
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.7588
p.L861F
DO219125
LUSC
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.6981
p.S854F
DO222632
MELA
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.2222
p.S854F
DO37571
SKCM
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.2222
p.S856G
DO36491
READ
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.2778
p.Q862R
DO40879
UCEC
ICGC
YRYALQDMD
DEG_APCC_DBOX_1
0.7329
p.S856P
ACH-000303
Gastric Cancer
CCLE
YRYALQDMD
DEG_APCC_DBOX_1
0.2778
p.S856P
NCI-SNU-5
stomach
COSMIC
YRYALQDMD
DEG_APCC_DBOX_1
0.2778
p.M868I
ACH-000955
Colon/Colorectal Cancer
CCLE
YRYALQDMD
DEG_APCC_DBOX_1
0.2778
p.M868I
SNU-407
large_intestine
COSMIC
YRYALQDMD
DEG_APCC_DBOX_1
0.2778
p.S856F
ACH-001973
Metastasis
CCLE
YRYALQDMD
DEG_APCC_DBOX_1
0.2778
Drug responses associated with PCDH18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRYALQDMD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCL0
Protocadherin-18
DEG_APCC_DBOX_1
858:866
YRYALQDMD
APC,CDC20,FZR1
0.6463
More...