| Tag | Content |
|---|---|
| Uniprot ID | A0A0G2K742 |
| Entrez ID | |
| Genbank protein ID | |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSRNOP00000074055 |
| Ensembl nucleotide ID | ENSRNOG00000014851 |
| Gene name | Collagen type IV alpha 4 chain |
| Gene symbol | Col4a4 |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MRCFFRWTES YGTGPWSLIF ILFTIQYEYG SSKKYGSPCG GRNCSVCQCF PEKGSRGHPG 60 PLGPQGPIGP LGPPGPIGIP GEKGLRGDSG LPGPPGEKGD KGPTGVPGFP GVDGVPGHPG 120 PPGPRGKPGM DGYNGSRGDP GYPGERGAPG PGGPPGQPGE NGEKGRSVYI SGGVKGTQGD 180 RGDPGPLGLP GSRGAQGSTG PMGHAGTPGL AGPIGHPGSP GMKGDPAMGL KGQKGEPGEV 240 GQHGPLGPTL LVQPPDLGVY KGEKGVKGVP GRIGSPGPPG RKGEPGIGVK GEKGIPGFPG 300 PRGEPGSHGS PGFPGFKGIQ GAAGDPGLFG LRGPKGDPGD RGNPGPPGIL VTPAPPLKGV 360 PGDPGPPGHY GEIGDVGLPG PPGLPGRPGE TCPGIVGPPG PPGVPGPPGF PGDAGIPGRL 420 DCAPGKPGKP GLPGLPGAPG PEGPPGSNVI YCRPGYPGPM GEKGKMGPPG RRGAKGAKGN 480 EGLCDCPPGP MGPPGPPGPP GRQGGKGDLG LPGWHGEKGD PGQPGAEGPP GPPGRPGAVG 540 PPGLKGAKGD MVISRAKGQK GERGLDGPPG FPGPHGQDGR DGRAGERGDP GPRGDHKDAA 600 PGERGLPGLP GPPGKAGPEG PPGLGFPGPP GERGLPGEPG RPGMRGFDGM KGQKGDSIPC 660 NVTYPGKPGP PGFDGPPGLK GFPGPPGAPG MRCPVGQKGQ RGKPGMPGIP GPPGFRGVVG 720 DPGIKGERGT SPFGPPGPPG PPGMDGQKGM PGDSAFGDPG PPGERGLPGA PGMKGQKGYP 780 GCPGAGGPPG IPGSPGLKGP KGREGSPGLP GTPGSPGHSC ERGAPGIPGQ PGLPGTPGDP 840 GPPGWKGQPG DMGPSGPAGM KGLPGLPGLP GADGLRGPPG IPGLTGEEGP PALPALKGAP 900 GLPGFPGFPG ERGKSGPDGE PGRKGEAGEK GWPGLQGAPG ERGAKGDRGP PGDVGETAVS 960 RKGEPGDAGP PGDGGFSGER GDKGIPGIQG GRGDPGRDGP PGLHRGQPGM DGPPGPPGPP 1020 GPPGSPGLRG VIGFPGFPGD QGDPGSPGPP GFSGDDGARG PKGNKGDPAS QYGLPGPKGE 1080 PGSPGYQGHT GDSGEKGFPG DEGPRGPPGR PGQPGSLGPP GCPGDPGMPG QKGHPGEVGD 1140 PGPRGYSGDL GRPGPAGVKG PPGSPGLNGL HGLKGEKGAK GASGLLEMGP PGPMGTPGLK 1200 GEKGDPGSPG ISPPGLPGEK GFPGPPGRPG APGSAGTPGR AAKGDIPDPG PPGDWGPPGP 1260 DGPRGVPGPP GPRGNVSLLK GDPGDHGLPG PPGSRGPPGP PGCQGPPGCD GKDGQKGPMG 1320 LPGLPGPPGL PGAPGEKGLP GPPGRKGPVG PPGCRGEPGP PVDVDSCVPI PGLPGVPGPR 1380 GPEGAMGDPG QRGLPGPGCK GEAGLDGRRG QDGIPGSPGP PGRNGDTGEA GRTGAPGPPG 1440 MTGDPGPKGF GPGYLSGFLL VLHSQTDQEP ACPVGMPRLW TGYSLLYLEG QEKAHNQDLG 1500 LAGSCLPVFS TLPFAYCNIH QVCHYAQRND RSYWLSSAAP LPMMPLSEEE IRPYVSRCAV 1560 CEAPAQAVAV HSQDQSIPPC PQTWRSLWIG YSFLMHTGAG DQGGGQALMS PGSCLEDFRA 1620 APFLECQGRQ GTCHFFANKY SFWLTTVNPD LQFSSGPAPD TLKEVQAQRR KTSRCQVCMK 1680 HS 1682 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | COL4A4 | A0A452G3N1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | COL4A4 | 1286 | P53420 | Homo sapiens | Publication | More>> | ||
| 1:1 ortholog | Col4a4 | 12829 | Q9QZR9 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | COL4A4 | 459986 | H2R630 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | Col4a4 | A0A0G2K742 | Rattus norvegicus | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005604 | basement membrane |
| GO:0005587 | collagen type IV trimer |
| GO:0031012 | extracellular matrix |
| GO:0005615 | extracellular space |
| GO:0005201 | extracellular matrix structural constituent |
| GO:0038063 | collagen-activated tyrosine kinase receptor signaling pathway |
| GO:0030198 | extracellular matrix organization |
| GO:0032836 | glomerular basement membrane development |
| PROSITE ID | PROSITE Term |
|---|---|
| PS51403 | NC1_IV |