| Tag | Content |
|---|---|
| Uniprot ID | A0A452G3N1 |
| Entrez ID | |
| Genbank protein ID | |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSCHIP00000031158 |
| Ensembl nucleotide ID | ENSCHIG00000025629 |
| Gene name | Collagen type IV alpha 4 chain |
| Gene symbol | COL4A4 |
| Organism | Capra hircus |
| NCBI taxa ID | 9925 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | LSWTQLKRLI RMPWSCPYSR LPAPRGGKKF IGLCGGRDCS LCQCFPEKGS RGQPGPPGPQ 60 GPIGPLGPPG PIGIPGEKGM KGDSGRPGAA GDKGDKGHPG PPGSRGRPGI DGYNGSRGDP 120 GIPGERGALG PRGPPGLPGE KGEKGNSVFI LGATKGMQVI KNGILLILIF FFLKGEVGQQ 180 GSPGPTLLVQ PPDSGLYKGE KVILNSYDTL INCLNPSKCC YVFKGKPGIG RKGEKGIPGF 240 PGPRVRLLHA VFNFSEFGGI SLSHFYKIQS VILRGDPGDR GHPGPPGVLV TPSLPLKGLC 300 MTGPPGPRGF PGHPGFPGAA GVPGRADSAP GKPGNQGPTG LPGVPGLPGP PGSDVVYCTL 360 GQPGPQGIKG KVGPPGRRGS KGEKGSSGLC ACQPGPMGPP GPPGPPGRQG SKGDLGLPGW 420 LGEKGSPGPP GAKGSPGPPV SKFPGDHEDA APGDKGPPGP PGPPGRAGPR GPPGLGFPGP 480 PGERGQPGAP GWPGNRGPDG RKGQKGNFQC SCGRMSGPKG LPGHRGAPGL RCLDGQKGQR 540 GKPGISERPG PPGFRGDTGE PGLGGEKGSS PVGPPGAPGS PGVTGQKGPP GDPAIGYPGL 600 PGKSGLPGAP GSKGLRGDAG HPGTAGPAGM PGFPGLQGPK GREGSAGFPG IPGPPGHSCE 660 RGAPGIPGQP GLPGAPGSPG APGWKGQRGD MGPLGPAGMK GLPGVPGRPG ADGTPGFPGV 720 PGPTGDDGLP GLPGPKGPQG LPGFLGFPGE RGKPGQDGHP GRKGEHGEKG WPGSLGDQGL 780 KGVKGARGPL GYEGEMDIIS KKGETGEPGP SGDGGFPGEN GDKGHPGMQG RRGEPGSYGP 840 PGFHPGEPGR NGQPGLPGPL GPPGSPGLRG IIGFPGFPGD QVSSCCFGRK EKIKAFCPGD 900 LGASGEQGLP GAQGPGGPPG RPGPPGFSGP TGCPGNVKGA RRLPGHSSSS CLLDWSRAGS 960 AISQTCGPSG SPGLNGLHGL KGQKGSKGAS GSHEMGPPGP VGIPGPKGEA GDPGNPGISP 1020 PGPFGERGPP GPPGPPAGSP GPPGAPGKAL KGDIPDPGLP GDQGPPGPDG PRGMGQLWQR 1080 VMVLLSLDAC QLCWDGGAER MVVIPISGEP GPPADLDACP RIPGLPGVPG PRGPEGTMGL 1140 PGMRGPPGPG CKGEPGLDGR RGEDGLPGSP GPPGHKGDMG EAGCPGAPGP PGPIGDPGPI 1200 GFGPGYLSGF LLVLHSQTDG EPTCPMGMPR LWTGYSLLYL EGQEKAHNQD LGLAGSCLPI 1260 FSTLPFAYCN IHQVCHYARR NDRSYWLAST APLPMTPLSE DEIRPYISRC AVCEAPAQAV 1320 AVHSQDQSIP PCPRAWRSLW IGYSFLMHTG AGDQGGGQAL MSPGSCLEDF RAAPFLECQG 1380 RQGTCHFFAN KYSFWLTTVR PDLQFSSAPL PDTLKESHTQ RQKVSRCQVC VKHS 1434 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | COL4A4 | A0A452G3N1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | COL4A4 | 1286 | P53420 | Homo sapiens | Publication | More>> | ||
| 1:1 ortholog | Col4a4 | 12829 | Q9QZR9 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | COL4A4 | 459986 | H2R630 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | Col4a4 | A0A0G2K742 | Rattus norvegicus | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005587 | collagen type IV trimer |
| GO:0005201 | extracellular matrix structural constituent |
| GO:0032836 | glomerular basement membrane development |
| PROSITE ID | PROSITE Term |
|---|---|
| PS51403 | NC1_IV |