Gene: BLM

Basic information

Tag Content
Uniprot ID A0A2I3SP55
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSPTRP00000078799
Ensembl nucleotide ID ENSPTRG00000007460
Gene name BLM RecQ like helicase
Gene symbol BLM
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MAAVPQNNLQ EQLERHSART LNNKLSLSKP KFSGFTFKKK TSSDNNVSVT NVSVAKTPVL 60
RNKDVNVTED VSFSEPLPNT TNQQRAKDFF KNAPAGQQTQ RVGSKSLLPD FLQTPKEVLC 120
TTQNTPTVKK SRDTALKKLE FSSSPDSLST INDWDDMDDF DTSETSKSFV TPPQSHFVRV 180
STAQKSKKGK RNFFKAQLYT TNTVKTDFPP PSSESEQIDL TEEQKDDSEW LSSDVICIDD 240
GPIAEVHINE DAQESDSLKT HLEDERDNSK KKKNLEEAEL HSTEKVPCIE FDDDDYDTDF 300
VPPSPEEIIS SSSSSSKCLS MLKDLDTSDR KEDVLSTSKD LLSKPEKTST QELNPETSTD 360
CDARQISLQQ QLIHVMEHIC KLIDTIPDDK LKLLDCGNEL LQQRNIRRKL LTEVDFNKSD 420
ASLLGSMWRC RPDSLDGPMK GDSCPTGNSM KELNFSHLPS NSVSPGDCLL TTTLGKTGFS 480
ATRKNLFERP LFNTHLQKSF VSSNWAETPR LGKKNESSYF PGNVLTSTAV KDQNKHTASI 540
NDLERETQPS YDIDNFDIDD FDDDDDWEDI MHNLAASKSS TAAYQPIKEG RPIKSVSERL 600
SSAKTNCLPV SSTAQNINFS ESIQNYTDKS AQNLASGNLK HERFQSLSFP HTKEMMKIFH 660
KKFGLHNFRT NQLEAINAAL LGEDCFILMP TGGGKSLCYQ LPACVSPGVT VVISPLRSLI 720
VDQVQKLTSL DIPATYLTGD KTDSEATNIY LQLSKKDPII KLLYVTPEKI CASNRLISTL 780
ENLYERKLLA RFVIDEAHCV SQWGHDFRQD YRRMNMLRQK FPSVPVMALT ATANPRVQKD 840
ILTQLKILRP QVFSMSFNRH NLKYYVLPKK PKKVAFDCLE WIRKHHPYDS GIIYCLSRRE 900
CDTMADTLQR DGLAALAYHA GLSDSARDEV QQKWINQDGC QVICATIAFG MGIDKPDVRF 960
VIHASLPKSM EGYYQESGRA GRDGEISHCL LFYTYHDVTR LKRLIMMEKD GNHHTRETHF 1020
NNLYSMVHYC ENITECRRIQ LLAYFGENGF NPDFCKKHPD VSCDNCCKTK DYKTRDVTDD 1080
VKSIVRFVQE HSSSQGMRNI KHVGPSGRFT MNMLVDIFLE SLSSDPEVLL QIDGVTEDKL 1140
EKYGAEVISV LQKYSEWTSP AEDSSPGISL SSSRGPGRSA AEELDEEIPV SSHYFASKTR 1200
NERKRKKMPA SQRSKRRKAA SSGSKAKGGS ATCRKISSKT KSSSIIGSSS ASHTCQATSG 1260
TNSKLGIMAP PKPINRPFLK PSYAFS 1286

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologBLM100685609E2RS76Canis lupus familiarisPredictionMore>>
1:1 orthologBLMA0A452E3H5Capra hircusPredictionMore>>
1:1 orthologBLM641P54132CL/PHomo sapiensPublicationMore>>
1:1 orthologBlm12144O88700Mus musculusPredictionMore>>
1:1 orthologBLMA0A2I3SP55Pan troglodytesPredictionMore>>
1:1 orthologBLMA0A5G2R540Sus scrofaPredictionMore>>
1:1 orthologBLM100345123G1T6H2Oryctolagus cuniculusPredictionMore>>
1:1 orthologBlmD3ZQW1Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0005524 ATP binding
GO:0003677 DNA binding
GO:0004386 helicase activity
GO:0006310 DNA recombination
GO:0006260 DNA replication

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR012532 BDHCT
IPR032439 BDHCT_assoc
IPR032437 BLM_N
IPR011545 DEAD/DEAH_box_helicase_dom
IPR002464 DNA/RNA_helicase_DEAH_CS
IPR004589 DNA_helicase_ATP-dep_RecQ
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR032284 RecQ_Zn-bd
IPR036388 WH-like_DNA-bd_sf

PROSITE

PROSITE ID PROSITE Term
PS00690 DEAH_ATP_HELICASE
PS51192 HELICASE_ATP_BIND_1
PS51194 HELICASE_CTER

Pfam

Pfam ID Pfam Term
PF08072 BDHCT
PF16204 BDHCT_assoc
PF16202 BLM_N
PF00270 DEAD
PF00271 Helicase_C
PF16124 RecQ_Zn_bind