Gene:

Basic information

Tag Content
Uniprot ID A0A4X1U3U5
Entrez ID 100155991
Genbank protein ID
Genbank nucleotide ID XM_005672980.2
Ensembl protein ID ENSSSCP00070022655
Ensembl nucleotide ID ENSSSCG00070013872
Gene name Uncharacterized protein
Gene symbol
Organism Sus scrofa
NCBI taxa ID 9823
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MLNNLTDCED GDGGANPGDG NPKESSPFIN STDTEKGKEY DGKNMALFEE EMDTSPMVSS 60
LLSGLANYTN LPQGSREHEE AENNEGGKKK PVQAPRMGTF MGVYLPCLQN IFGVILFLRL 120
TWVVGIAGIM EAFCMVFICC SCTMLTAISM SAIATNGVVP AGGSYYMISR SLGPEFGGAV 180
GLCFYLGTTF AGAMYILGTI EILLAYLFPA MAIFKAEDAS GEAAAMLNNM RVYGTCVLTC 240
MATVVFVGVK YVNKFALVFL GCVILSILAI YAGVIKSAFD PPNFPICLLG NRTLSRHGFD 300
VCAKLAWEGN ETVTTRLWGL FCSSRLLNAT CDEYFTRNNV TEIQGIPGAA SGLIKENLWS 360
SYLTKGVIVE RRGMPSVGLA DGTPVDMDHP YVFSDMTSYF TLLVGIYFPS VTGIMAGSNR 420
SGDLRDAQKS IPTGTILAIA TTSAVYISSV VLFGACIEGV VLRDKFGEAV NGNLVVGTLA 480
WPSPWVIVIG SFFSTCGAGL QSLTGAPRLL QAISRDGIVP FLQVFGHGKA NGEPTWALLL 540
TACICEIGIL IASLDEVAPI LSMFFLMCYM FVNLACAVQT LLRTPNWRPR FRYYHWTLSF 600
LGMSLCLALM FICSWYYALV AMLIAGLIYK YIEYRGAEKE WGDGIRGLSL SAARYALLRL 660
EEGPPHTKNW RPQLLVLVRV DQDQNVVHPQ LLSLTSQLKA GKGLTIVGSV LEGTFLDNHP 720
QAQRAEESIR RLMEAEKVKG FCQVVISSNL RDGVSHLIQS GGLGGLQHNT VLVGWPRNWR 780
QKEDHQTWRN FIELVRETTA GHLALLVTKN VSMFPGNPER FSEGSIDVWW IVHDGGMLML 840
LPFLLRHHKV WRKCKMRIFT VAQMDDNSIQ MKKDLTTFLY HLRITAEVEV VEMHESDISA 900
YTYEKTLVME QRSQILKQMH LTKNEREREI QSITDESRGS IRRKNPANTR LRLNVPEETA 960
GDSEEKPEEE VQLIHDQSAP SCPSSSPSPG EEPEGEGEAD PEKVHLTWTK DKSVAEKNKG 1020
PSPVSSEGIK DFFSMKPEWE NLNQSNVRRM HTAVRLNEVI VKKSRDAKLV LLNMPGPPRN 1080
RNGDENYMEF LEVLTEHLDR VMLVRGGGRE VITIYS 1116

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologSLC12A5510157A8KC65Bos taurusPredictionMore>>
1:1 orthologSLC12A5A0A452EYG1Capra hircusPredictionMore>>
1:1 orthologSLC12A557468Q9H2X9Homo sapiensPredictionMore>>
1:1 orthologSlc12a557138Q91V14CPOMus musculusPublicationMore>>
1:1 orthologSLC12A5A0A2I3RM58Pan troglodytesPredictionMore>>
1:1 ortholog100155991A0A4X1U3U5Sus scrofaPredictionMore>>
1:1 orthologSlc12a5F1LNP4Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005887 integral component of plasma membrane
GO:0045202 synapse
GO:0015379 potassium:chloride symporter activity
GO:0007268 chemical synaptic transmission

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0472 Membrane
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR004841 AA-permease/SLC12A_dom
IPR030358 KCC2
IPR000076 KCL_cotranspt
IPR018491 SLC12_C
IPR004842 SLC12A_fam

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF00324 AA_permease
PF03522 SLC12