Gene: PDSS2

Basic information

Tag Content
Uniprot ID D0G786
Entrez ID 100312977
Genbank protein ID HDB70635.1; BAI48039.1; HCZ74598.1;
Genbank nucleotide ID NM_001167653.1
Ensembl protein ID ENSSSCP00000048106
Ensembl nucleotide ID ENSSSCG00000036168
Gene name Decaprenyl-diphosphate synthase subunit 2
Gene symbol PDSS2
Organism Sus scrofa
NCBI taxa ID 9823
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MSLRQLLKRL PYFGASGPPR RPLDTISSVV SWRGQSSRSP AHWNQVVSEA EKIVGYPTSF 60
MSLRCLLSDE LSNIAMQVRK LVGTQHPLLT TARGLVHDSQ HNLQLRGLVV LLISKAAGPS 120
SVNASCQNYD MVSGIYSCQR SLAEITELIH TALLVHRGIV NLNELQSSDG PLKDMQFGNK 180
IAILSGDFLL ANACNGLALL QNTKVVELLA SALMDLVQGV YHENSTSAKE NRITDDIGIS 240
TWKEQTFLSH GALLAKSCQA AMELAKHDAE VQDMAFQYGK HMAMSHKINS DLQPFIKEKT 300
SDSLTFNLNS APVVLHQEFL GRDLWIKQIR KAQEKGKLDY AKLRETIKAG KGVTSAIDLC 360
RYHGNKALEA LESFPPSEAR TALENIVFAV TRFS 394

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPDSS2521115A6QR05Bos taurusPredictionMore>>
1:1 orthologPDSS2481950A0A5F4DM97Canis lupus familiarisPredictionMore>>
1:1 orthologPDSS2102191138A0A452EPD3Capra hircusPredictionMore>>
1:1 orthologPDSS2100072062A0A3Q2LJH9Equus caballusPredictionMore>>
1:1 orthologPDSS257107Q86YH6Homo sapiensPredictionMore>>
1:1 orthologPdss271365Q33DR3CPOMus musculusPublicationMore>>
1:1 orthologPDSS2462912H2QTH8Pan troglodytesPredictionMore>>
1:1 orthologPDSS2100312977D0G786Sus scrofaPredictionMore>>
1:1 orthologPDSS2A0A5F9DMW0Oryctolagus cuniculusPredictionMore>>
1:1 orthologPdss2365592Q5U2R1Rattus norvegicusPredictionMore>>
1:1 orthologpdss2B7ZD86Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005829 cytosol
GO:1990234 transferase complex
GO:0046982 protein heterodimerization activity
GO:0000010 trans-hexaprenyltranstransferase activity
GO:0050347 trans-octaprenyltranstransferase activity
GO:0008299 isoprenoid biosynthetic process
GO:0050878 regulation of body fluid levels
GO:0006744 ubiquinone biosynthetic process

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome
KW-0808 Transferase

Interpro

InterPro ID InterPro Term
IPR008949 Isoprenoid_synthase_dom_sf
IPR000092 Polyprenyl_synt

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF00348 polyprenyl_synt