| Tag | Content |
|---|---|
| Uniprot ID | D3ZA67 |
| Entrez ID | 364680 |
| Genbank protein ID | EDL98136.1 |
| Genbank nucleotide ID | NM_001108880.1 |
| Ensembl protein ID | ENSRNOP00000022830 |
| Ensembl nucleotide ID | ENSRNOG00000016915 |
| Gene name | BARX homeobox 1 |
| Gene symbol | Barx1 |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MQRPGEPGSA RFGPPEGCAD HRPHRYRSFM IEEILTEPPG PKGAAPAAAA AAAGELLKFG 60 VQALLAARPF HSHLAVLKAE QAAVFKFPLA PLGCSGLGSA LLAAGPGMPG TAGTSHLPLE 120 LQLRGKLEAA GSGEPGTKAK KGRRSRTVFT ELQLMGLEKR FEKQKYLSTP DRIDLAESLG 180 LSQLQVKTWY QNRRMKWKKI VLQGGGLESP TKPKGRPKKN SIPTSEQLTE QERAKEAEKP 240 AETPGEPSDR SCED 254 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | BARX1 | 610486 | E2RF36 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | BARX1 | A0A452F3S2 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | BARX1 | 56033 | Q9HBU1 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Barx1 | 12022 | Q9ER42 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | BARX1 | 745472 | H2R4D7 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | BARX1 | F1SUC6 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Barx1 | 364680 | D3ZA67 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | barx1 | 553644 | B2GRF3 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005634 | nucleus |
| GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding |
| GO:0048856 | anatomical structure development |
| GO:0048513 | animal organ development |
| GO:0009952 | anterior/posterior pattern specification |
| GO:0007267 | cell-cell signaling |
| GO:0055123 | digestive system development |
| GO:0030855 | epithelial cell differentiation |
| GO:0030178 | negative regulation of Wnt signaling pathway |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| GO:0048536 | spleen development |
| GO:0009888 | tissue development |
| Pfam ID | Pfam Term |
|---|---|
| PF00046 | Homeodomain |