Gene: Csrnp1

Basic information

Tag Content
Uniprot ID D4AAK3
Entrez ID 363165
Genbank protein ID EDL76892.1
Genbank nucleotide ID XM_006244122.3; XM_008766689.2; XM_006244120.3; XM_006244121.2; NM_001108786.1;
Ensembl protein ID ENSRNOP00000045373; ENSRNOP00000071969;
Ensembl nucleotide ID ENSRNOG00000033433
Gene name AXIN1 up-regulated 1 (Predicted)
Gene symbol Csrnp1
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MAGIQKRKFD QLEEDDCSSS SLSSGDLSPS PPSSSASPAW TSEEEGLGDQ PPQPDQDSSG 60
IQSLMPPSIL KRAPRERPGH VAFDGITVYY FPRCQGFTSV PSHGGCTLGM ASRHSTCRLF 120
SLAEFKQEQF RARREKLRRR LKEEKLEMLK WKLSVSGVPE AGADVPLTVD AIDDASVEED 180
LAVAVAGGRL EEANFLQPYP PRQRRALLRA SGVRRIDREE KRELQALRQS REDCGCHCDG 240
VCDPETCSCI LAGIKCQMDH TSFPCGCCSE GCENPHGRVE FNQARVQTHF IHTLTRLQME 300
QGAESLGDPE SPMEDVPVEQ TVVSPFPPSK PTMSNDLGDS SCGSDMTDSS TTYSSGGSGS 360
RSEAPNHLAH PSLPGSSFRS GIDEDSLEQI LNFSDSDLGI EEEEEEGGSV GNLDNLSCFH 420
LADIFGTGDP GSLASWTHSQ FGSSLPSGIL DENANLDASC FLSSGLEGLR EGSLPSSSGS 480
PEGEAAQSSS LDLSLSSCDS FELLQSLPDY SLGPHYTSRR VSGSLDSLET FHPSPSFSPP 540
RDASFLDSLI GLSEPVTDVL APLLESQFED TAVVPLDPVP V 581

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologCSRNP1F1MDN9Bos taurusPredictionMore>>
1:1 orthologCSRNP1485596E2RJ34Canis lupus familiarisPredictionMore>>
1:1 orthologCSRNP1102186348A0A452FLI0Capra hircusPredictionMore>>
1:1 orthologCSRNP164651Q96S65Homo sapiensPredictionMore>>
1:1 orthologCsrnp1215418P59054CPOMus musculusPublicationMore>>
1:1 orthologCSRNP1470794K7BVU1Pan troglodytesPredictionMore>>
1:1 orthologCSRNP1100519275F1SJR3Sus scrofaPredictionMore>>
1:1 orthologCSRNP1G1TKZ1Oryctolagus cuniculusPredictionMore>>
1:1 orthologCsrnp1363165D4AAK3Rattus norvegicusPredictionMore>>
1:1 orthologcsrnp1bF1QNJ1Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003700 DNA-binding transcription factor activity
GO:0043565 sequence-specific DNA binding
GO:0060325 face morphogenesis
GO:0048008 platelet-derived growth factor receptor signaling pathway
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0009791 post-embryonic development
GO:0006355 regulation of transcription, DNA-templated
GO:0060021 roof of mouth development
GO:0048705 skeletal system morphogenesis

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0175 Coiled coil
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR031972 CSRNP_N
IPR023260 Cys/Ser-rich_nuc_prot

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF16019 CSRNP_N