Gene: fam49a

Basic information

Tag Content
Uniprot ID Q5TZ57
Entrez ID 378872
Genbank protein ID
Genbank nucleotide ID XM_009294701.2; XM_005160648.3; NM_001324493.1; XM_005160645.3; XM_005160646.3;
Ensembl protein ID ENSDARP00000118942
Ensembl nucleotide ID ENSDARG00000006672
Gene name Family with sequence similarity 49 member A
Gene symbol fam49a
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MGNLLKVLTC TDFDQGPNFF LDFENAQPTD CEREVWNQVN AVLQESESIL SGLQAYKGAG 60
QEIRDAIQNP NDMLLQERAW NSVCPLVIRL KKFYAFSLKL EQALQSLLES LTCPPYTPTQ 120
HLEREQALAK QFAEILHFTL RFDELKMRIP AIQNDFSYYR RTISRNRLNN MNLDIENEVN 180
NEMANRMSLF YAEATPMLKT LSTATTNFVT ENKTLPLENT TDCLSTMASV CKVMLETPEY 240
TSRFNSEDTL LFCMRVMVGV IILYDHVHPN GAFNKSSKID MKGCIKVLKD QPADNVEGLL 300
NALKFTTKHL NDESTPKNIR TMLQ 324

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologCYRIA504763Q17QT7Bos taurusPredictionMore>>
1:1 orthologCYRIA475673E2QRS9Canis lupus familiarisPredictionMore>>
1:1 orthologFAM49A102179293A0A452F6L7Capra hircusPredictionMore>>
1:1 orthologCYRIA81553Q9H0Q0Homo sapiensPublicationMore>>
1:1 orthologCyria76820Q8BHZ0Mus musculusPredictionMore>>
1:1 orthologCYRIA459044H2QHG7Pan troglodytesPredictionMore>>
1:1 orthologCYRIA100518011F2Z5E7Sus scrofaPredictionMore>>
1:1 orthologFam49a298890B0BN65Rattus norvegicusPredictionMore>>
1:1 orthologfam49a378872Q5TZ57Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0016020 membrane
GO:0031267 small GTPase binding
GO:0030833 regulation of actin filament polymerization
GO:0045580 regulation of T cell differentiation
GO:0048538 thymus development

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0175 Coiled coil
KW-0449 Lipoprotein
KW-0472 Membrane
KW-1267 Proteomics identification
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR039789 CYRI
IPR009828 DUF1394

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF07159 DUF1394