Gene: TENT5C

Basic information

Tag Content
Uniprot ID Q5VWP2; A3KMG2; Q8NE25; Q9NXK0;
Entrez ID 54855
Genbank protein ID AAH36516.3; BAA91010.1; AAI31727.1;
Genbank nucleotide ID NM_017709.3
Ensembl protein ID ENSP00000358458
Ensembl nucleotide ID ENSG00000183508
Gene name Terminal nucleotidyltransferase 5C
Gene symbol TENT5C
Organism Homo sapiens
NCBI taxa ID 9606
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Nucleotidyltransferase that act as a non-canonical poly(A) RNA polymerase which enhances mRNA stability and gene expression. Mainly targets mRNAs encoding endoplasmic reticulum-targeted protein and may be involved in induction of cell death.
Sequence
MAEESSCTRD CMSFSVLNWD QVSRLHEVLT EVVPIHGRGN FPTLEITLKD IVQTVRSRLE 60
EAGIKVHDVR LNGSAAGHVL VKDNGLGCKD LDLIFHVALP TEAEFQLVRD VVLCSLLNFL 120
PEGVNKLKIS PVTLKEAYVQ KLVKVCTDTD RWSLISLSNK NGKNVELKFV DSIRRQFEFS 180
VDSFQIILDS LLFFYDCSNN PISEHFHPTV IGESMYGDFE EAFDHLQNRL IATKNPEEIR 240
GGGLLKYSNL LVRDFRPTDQ EEIKTLERYM CSRFFIDFPD ILEQQRKLET YLQNHFAEEE 300
RSKYDYLMIL RRVVNESTVC LMGHERRQTL NLISLLALRV LAEQNIIPSA TNVTCYYQPA 360
PYVSDGNFSN YYVAHPPVTY SQPYPTWLPC N 391

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTENT5C102178682A0A452DRJ3Capra hircusPredictionMore>>
1:1 orthologTENT5C100059755F7DFD9Equus caballusPredictionMore>>
1:1 orthologTENT5C54855Q5VWP2Homo sapiensPredictionMore>>
1:1 orthologTent5c74645Q5SSF7CPOMus musculusPublicationMore>>
1:1 orthologTENT5C469434G2HIG9Pan troglodytesPredictionMore>>
1:1 orthologTENT5C100525341A0A287AN43Sus scrofaPredictionMore>>
1:1 orthologTent5c310721Q5XIV0Rattus norvegicusPredictionMore>>
1:1 orthologtent5cB0V2X8Danio rerioPredictionMore>>

Other genetic variants/mutations

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Disease or phenotype associated information

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0003723 RNA bindingIEA
GO:0005515 protein bindingIPI
GO:1990817 RNA adenylyltransferase activityIDA

GO:Biological Process

GO ID GO Term Evidence
GO:0001701 in utero embryonic developmentIEA
GO:0016032 viral processIEA
GO:0048255 mRNA stabilizationIDA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005634 nucleusIDA
GO:0005737 cytoplasmIDA

Reactome Pathway

Reactome ID Reactome Term Evidence

Drugs and compounds information

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Functional annotations

Keywords

Keyword ID Keyword Term
KW-0963 Cytoplasm
KW-0945 Host-virus interaction
KW-0548 Nucleotidyltransferase
KW-0539 Nucleus
KW-0621 Polymorphism
KW-1185 Reference proteome
KW-0694 RNA-binding
KW-0808 Transferase

Interpro

InterPro ID InterPro Term
IPR012937 TET5

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF07984 NTP_transf_7