Gene Page

Gene Page: DCUN1D3

Summary

GeneID

123879

Symbol

DCUN1D3

Synonyms

44M2.4|DKFZp686O0290|FLJ41725|MGC48972

Description

DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)

Locus tag

Gene type

protein-coding

Map location

16p12.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_UP	579	346	All SZGR genes in this pathway
NUYTTEN_EZH2_TARGETS_UP	1037	673	All SZGR genes in this pathway
RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_DN	382	224	All SZGR genes in this pathway
DURCHDEWALD_SKIN_CARCINOGENESIS_DN	264	168	All SZGR genes in this pathway
MARSON_BOUND_BY_FOXP3_STIMULATED	1022	619	All SZGR genes in this pathway
SANSOM_APC_MYC_TARGETS	217	138	All SZGR genes in this pathway
ACEVEDO_LIVER_CANCER_DN	540	340	All SZGR genes in this pathway
ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_DN	274	165	All SZGR genes in this pathway
WHITFIELD_CELL_CYCLE_S	162	86	All SZGR genes in this pathway
RAO_BOUND_BY_SALL4_ISOFORM_B	517	302	All SZGR genes in this pathway
LIM_MAMMARY_STEM_CELL_UP	489	314	All SZGR genes in this pathway
ZWANG_CLASS_3_TRANSIENTLY_INDUCED_BY_EGF	222	159	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	820	827	1A,m8	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-101	460	466	m8	hsa-miR-101	UACAGUACUGUGAUAACUGAAG
miR-132/212	547	553	1A	hsa-miR-212^SZ	UAACAGUCUCCAGUCACGGCC
miR-132/212	547	553	1A	hsa-miR-132^brain	UAACAGUCUACAGCCAUGGUCG
miR-141/200a	539	546	1A,m8	hsa-miR-141	UAACACUGUCUGGUAAAGAUGG
miR-141/200a	539	546	1A,m8	hsa-miR-200a	UAACACUGUCUGGUAACGAUGU
miR-145	1716	1722	1A	hsa-miR-145	GUCCAGUUUUCCCAGGAAUCCCUU
miR-155	562	568	1A	hsa-miR-155	UUAAUGCUAAUCGUGAUAGGGG
miR-17-5p/20/93.mr/106/519.d	163	169	m8	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-182	1118	1124	1A	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA
miR-19	291	297	1A	hsa-miR-19a	UGUGCAAAUCUAUGCAAAACUGA
miR-19	291	297	1A	hsa-miR-19b	UGUGCAAAUCCAUGCAAAACUGA
miR-203.1	707	713	1A	hsa-miR-203	UGAAAUGUUUAGGACCACUAG
miR-204/211	1778	1785	1A,m8	hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
miR-204/211	1778	1785	1A,m8	hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
miR-30-5p	1266	1272	1A	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
				hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-320	1600	1606	m8	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-329	465	471	1A	hsa-miR-329^brain	AACACACCUGGUUAACCUCUUU
miR-335	586	592	m8	hsa-miR-335^brain	UCAAGAGCAAUAACGAAAAAUGU
miR-338	832	838	1A	hsa-miR-338^brain	UCCAGCAUCAGUGAUUUUGUUGA
miR-381	121	127	m8	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-495	1221	1227	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-96	1118	1124	1A	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.