Search results: The pahtway p3386 has 1022 genes in the original annotation. Currently, there are 619 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
10953TOMM34HTOM34P | TOM34 | URCC3translocase of outer mitochondrial membrane 34-CV:PGCnp
56832IFNKIFNT1 | INFE1interferon, kappa-CV:PGCnp
3799KIF5BHEL-S-61 | KINH | KNS | KNS1 | UKHCkinesin family member 5B10p11.22CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
94134ARHGAP12-Rho GTPase activating protein 1210p11.22CV:PGCnp
DMG:Wockner_2014
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
8829NRP1BDCA4 | CD304 | NP1 | NRP | VEGF165Rneuropilin 110p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
23412COMMD3BUP | C10orf8COMM domain containing 310p12.2CV:PGCnp
DMG:Nishioka_2013
221078NSUN64933414E04Rik | ARL5B-AS1 | NOPD1NOP2/Sun RNA methyltransferase family member 610p12.31CV:PGCnp
DMG:Jaffe_2016
LK:YES
221079ARL5BARL8ADP ribosylation factor like GTPase 5B10p12.31CV:PGCnp
PMID:cooccur
64421DCLRE1CA-SCID | DCLREC1C | RS-SCID | SCIDA | SNM1CDNA cross-link repair 1C10p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
644890MEIG1SPATA39 | bA2K17.3meiosis/spermiogenesis associated 110p13CV:PGCnp
DMG:Wockner_2014
57118CAMK1DCKLiK | CaM-K1 | CaMKIDcalcium/calmodulin dependent protein kinase ID10p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
Ascano FMRP targets
80013FAM188AC10orf97 | CARP | DERP5 | MST126 | MSTP126 | my042family with sequence similarity 188 member A10p13CV:PGCnp
DMG:Jaffe_2016
83641FAM107BC10orf45family with sequence similarity 107 member B10p13CV:GWASdb
CV:PGCnp
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
1316KLF6BCD1 | CBA1 | COPEB | CPBP | GBF | PAC1 | ST12 | ZF9Kruppel-like factor 610p15Association
CV:PGCnp
DMG:Jaffe_2016
7073TIAL1TCBP | TIARTIA1 cytotoxic granule-associated RNA binding protein-like 110qCV:GWASdb
CV:PGCnp
11130ZWINTHZwint-1 | KNTC2AP | SIP30 | ZWINT1ZW10 interacting kinetochore protein10q21-q22CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
1959EGR2AT591 | CMT1D | CMT4E | KROX20early growth response 210q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
7321UBE2D1E2(17)KB1 | SFT | UBC4/5 | UBCH5 | UBCH5Aubiquitin conjugating enzyme E2 D110q21.1CV:PGCnp
PMID:cooccur
84159ARID5BDESRT | MRF-2 | MRF2AT-rich interaction domain 5B10q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
221035REEP3C10orf74 | Yip2breceptor accessory protein 310q21.3CV:PGCnp
DMG:Wockner_2014
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
54541DDIT4Dig2 | REDD-1 | REDD1DNA damage inducible transcript 410q22.1CV:PGCnp
DMG:Jaffe_2016
54788DNAJB12DJ10DnaJ heat shock protein family (Hsp40) member B1210q22.1CV:PGCnp
DMG:Montano_2016
310ANXA7ANX7 | SNX | SYNEXINannexin A710q22.2PMID:cooccur
23223RRP12KIAA0690ribosomal RNA processing 12 homolog10q24.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
79803HPS6BLOC2S3HPS6, biogenesis of lysosomal organelles complex 2 subunit 310q24.32CV:PGCnpAscano FMRP targets
119392SFR1C10orf78 | MEI5 | MEIR5 | bA373N18.1SWI5 dependent homologous recombination repair protein 110q25.1CV:GWASdb
CV:PGCnp
85450ITPRIPDANGER | KIAA1754 | bA127L20 | bA127L20.2inositol 1,4,5-trisphosphate receptor interacting protein10q25.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
80313LRRC27-leucine rich repeat containing 2710q26.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
10062NR1H3LXR-a | LXRA | RLD-1nuclear receptor subfamily 1 group H member 311p11.2CV:PGCnp
DMG:Jaffe_2016
5795PTPRJCD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1protein tyrosine phosphatase, receptor type J11p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1643DDB2DDBB | UV-DDB2 | XPEdamage specific DNA binding protein 211p11.2CV:PGCnp
79096C11orf49-chromosome 11 open reading frame 4911p11.2CV:PGCnp
53ACP2LAPacid phosphatase 2, lysosomal11p11.2|11p12-p11CV:PGCnp
PMID:cooccur
Ascano FMRP targets
54765TRIM44DIPB | HSA249128 | MC7tripartite motif containing 4411p13CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
57084SLC17A6DNPI | VGLUT2solute carrier family 17 member 611p14.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
54472TOLLIPIL-1RAcPIPtoll interacting protein11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
4676NAP1L4NAP1L4b | NAP2 | NAP2L | hNAP2nucleosome assembly protein 1 like 411p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Ascano FMRP targets
391RHOGARHGras homolog family member G11p15.5-p15.4CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
64231MS4A6A4SPAN3 | 4SPAN3.2 | CD20L3 | CDA01 | MS4A6 | MST090 | MSTP090membrane spanning 4-domains A6A11q12.1CV:PGCnp
DMG:vanEijk_2014
10313RTN3ASYIP | HAP | NSPL2 | NSPLII | RTN3-A1reticulon 311q13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7351UCP2BMIQ4 | SLC25A8 | UCPHuncoupling protein 2 (mitochondrial, proton carrier)11q13Association
CV:PGCnp
GO_Annotation
PMID:cooccur
4926NUMA1NMP-22 | NUMAnuclear mitotic apparatus protein 111q13CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
Ascano FMRP targets
6520SLC3A24F2 | 4F2HC | 4T2HC | CD98 | CD98HC | MDU1 | NACAEsolute carrier family 3 member 211q13CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
PMID:cooccur
CELL METABOLISM
57804POLD4POLDS | p12polymerase (DNA) delta 4, accessory subunit11q13PMID:cooccur
2495FTH1FHC | FTH | FTHL6 | HFE5 | PIG15 | PLIFferritin, heavy polypeptide 111q13CV:PGCnp
PMID:cooccur
CompositeSet
283130SLC25A45-solute carrier family 25 member 4511q13.1CV:PGCnp
DMG:Wockner_2014
55298RNF121-ring finger protein 12111q13.4CV:PGCnp
283208P4HA3-prolyl 4-hydroxylase subunit alpha 311q13.4CV:PGCnp
10714POLD3P66 | P68 | PPP1R128polymerase (DNA) delta 3, accessory subunit11q14CV:PGCnp
54843SYTL2CHR11SYT | EXO4 | PPP1R151 | SGA72M | SLP2 | SLP2Asynaptotagmin like 211q14CV:PGCnp
DEG:Zhao_2015
GO_Annotation
EXOCYTOSIS
79053ALG8CDG1HALG8, alpha-1,3-glucosyltransferase11q14.1CV:PGCnp
79731NARS2DFNB94 | SLM5 | asnRSasparaginyl-tRNA synthetase 2, mitochondrial (putative)11q14.1CV:PGCnp
DMG:Jaffe_2016
330BIRC3AIP1 | API2 | CIAP2 | HAIP1 | HIAP1 | MALT2 | MIHC | RNF49 | c-IAP2baculoviral IAP repeat containing 311q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
60496AASDHPPTAASD-PPT | ACPS | CGI-80 | LYS2 | LYS5aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase11q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
472ATMAT1 | ATA | ATC | ATD | ATDC | ATE | TEL1 | TELO1ATM serine/threonine kinase11q22-q23CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Ascano FMRP targets
143888KDELC2-KDEL motif containing 211q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Guipponi_2014
GSMA_I
3587IL10RACD210 | CD210a | CDW210A | HIL-10R | IL-10R1 | IL10Rinterleukin 10 receptor subunit alpha11q23Association
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
PMID:cooccur
79796ALG9CDG1L | DIBD1 | LOH11CR1JALG9, alpha-1,2-mannosyltransferase11q23DMG:Jaffe_2016
GSMA_I
915CD3DCD3-DELTA | IMD19 | T3DCD3d molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
916CD3EIMD18 | T3E | TCRECD3e molecule11q23CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_I
917CD3GCD3-GAMMA | IMD17 | T3GCD3g molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
85458DIXDC1CCD1DIX domain containing 111q23.1GSMA_I
PMID:cooccur
643CXCR5BLR1 | CD185 | MDR15C-X-C motif chemokine receptor 511q23.3CV:PGCnp
DMG:vanEijk_2014
23365ARHGEF12LARG | PRO2792Rho guanine nucleotide exchange factor 1211q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
7070THY1CD90 | CDw90Thy-1 cell surface antigen11q23.3DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
25833POU2F3Epoc-1 | OCT-11 | OCT11 | OTF-11 | PLA-1 | PLA1 | Skn-1aPOU class 2 homeobox 311q23.3CV:PGCnp
GSMA_I
56649TMPRSS4CAPH2 | MT-SP2 | TMPRSS3transmembrane protease, serine 411q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
2113ETS1ETS-1 | EWSR2 | c-ets-1 | p54ETS proto-oncogene 1, transcription factor11q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
220323OAFNS5ATP13TP2out at first homolog11q23.3CV:PGCnp
GSMA_I
4900NRGNRC3 | hngneurogranin11q24Association
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
54414SIAEAIS6 | CSE-C | CSEC | LSE | YSG2sialic acid acetylesterase11q24CV:PGCnp
DMG:Wockner_2014
84897TBRG1NIAM | TB-5transforming growth factor beta regulator 111q24.2CV:PGCnp
53340SPA17CT22 | SP17 | SP17-1sperm autoantigenic protein 1711q24.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
23310NCAPD3CAP-D3 | CAPD3 | hCAP-D3 | hHCP-6 | hcp-6non-SMC condensin II complex subunit D311q25CV:PGCnp
DNM:McCarthy_2014
5927KDM5ARBBP-2 | RBBP2 | RBP2lysine demethylase 5A12p11CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
4033LRMPJAW1lymphoid restricted membrane protein12p12.1CV:PGCnp
121506ERP27C12orf46 | PDIA8endoplasmic reticulum protein 2712p12.3CV:PGCnp
DMG:vanEijk_2014
51729WBP11NPWBP | PPP1R165 | SIPP1 | WBP-11WW domain binding protein 1112p12.3CV:PGCnp
144608C12orf60-chromosome 12 open reading frame 6012p12.3CV:PGCnp
DMG:Nishioka_2013
121504HIST4H4H4/phistone cluster 4, H412p12.3CV:PGCnp
1027CDKN1BCDKN4 | KIP1 | MEN1B | MEN4 | P27KIP1cyclin-dependent kinase inhibitor 1B12p13.1-p12CV:PGCnp
Network
PMID:cooccur
84318CCDC77-coiled-coil domain containing 7712p13.33CV:PGCnp
DMG:Jaffe_2016
4891SLC11A2DCT1 | DMT1 | NRAMP2solute carrier family 11 member 212q13CV:PGCnp
PMID:cooccur
6778STAT6D12S1644 | IL-4-STAT | STAT6B | STAT6Csignal transducer and activator of transcription 612q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
29843SENP1SuPr-2SUMO1/sentrin specific peptidase 112q13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
3695ITGB7-integrin subunit beta 712q13.13CV:PGCnp
DMG:vanEijk_2014
Network
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
114882OSBPL8MST120 | MSTP120 | ORP8 | OSBP10oxysterol binding protein like 812q14CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
4848CNOT2CDC36 | HSPC131 | NOT2 | NOT2HCCR4-NOT transcription complex subunit 212q15CV:PGCnp
DMG:Wockner_2014
56890MDM1-Mdm1 nuclear protein12q15CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
55266TMEM19-transmembrane protein 1912q21.1CV:PGCnp
1848DUSP6HH19 | MKP3 | PYST1dual specificity phosphatase 612q21.33CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
7334UBE2NHEL-S-71 | UBC13 | UBCHBEN; UBC13 | UbcH-ben | UbcH13ubiquitin conjugating enzyme E2 N12q22CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
28977MRPL42HSPC204 | L31MT | L42MT | MRP-L31 | MRP-L42 | MRP-S32 | MRPL31 | MRPS32 | PTD007 | RPML31 | S32MTmitochondrial ribosomal protein L4212q22CV:PGCnp
121457IKBIPIKIPIKBKB interacting protein12q23.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
255394TCP11L2-t-complex 11 like 212q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
9733SART3DSAP1 | P100 | RP11-13G14 | TIP110 | p110 | p110(nrb)squamous cell carcinoma antigen recognized by T-cells 312q24.1CV:PGCnpAscano FMRP targets
23479ISCU2310020H20Rik | HML | ISU2 | NIFU | NIFUN | hnifUiron-sulfur cluster assembly enzyme12q24.1CV:PGCnp
DMG:Jaffe_2016
89910UBE3BBPIDS | KOSubiquitin protein ligase E3B12q24.11CV:PGCnpCompositeSet
Darnell FMRP targets
83892KCTD10BTBD28 | MSTP028 | ULRO61 | hBACURD3potassium channel tetramerization domain containing 1012q24.11CV:PGCnp
51184GPN3ATPBD1CGPN-loop GTPase 312q24.11CV:PGCnp
7184HSP90B1ECGP | GP96 | GRP94 | HEL-S-125m | HEL35 | TRA1heat shock protein 90kDa beta family member 112q24.2-q24.3CV:PGCnp
DMG:Jaffe_2016
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
55884WSB2SBA2WD repeat and SOCS box containing 212q24.23CV:PGCnp
DMG:Wockner_2014
6249CLIP1CLIP | CLIP-170 | CLIP170 | CYLN1 | RSNCAP-Gly domain containing linker protein 112q24.3CV:PGCnp
DMG:Wockner_2014
9761MLECKIAA0152malectin12q24.31CV:PGCnp
DMG:Jaffe_2016
353116RILPL1GOSPEL | RLP1Rab interacting lysosomal protein-like 112q24.31CV:PGCnp
9478CABP1CALBRAIN | HCALB_BRcalcium binding protein 112q24.31CV:PGCnp
DMG:Wockner_2014
GO_Annotation
11066SNRNP35HM-1 | U1SNRNPBPsmall nuclear ribonucleoprotein U11/U12 subunit 3512q24.31CV:PGCnp
79720VPS37B-VPS37B, ESCRT-I subunit12q24.31CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
DMG:Wockner_2014
84678KDM2BCXXC2 | FBXL10 | Fbl10 | JHDM1B | PCCX2lysine demethylase 2B12q24.31CV:PGCnp
DMG:Wockner_2014
DNM:Girard_2011
CompositeSet
Chromatin Remodeling Genes
5025P2RX4P2X4 | P2X4Rpurinergic receptor P2X 412q24.32CV:PGCnp
GO_Annotation
54737MPHOSPH8HSMPP8 | TWA3 | mpp8M-phase phosphoprotein 813q12.11CV:PGCnp
DMG:Jaffe_2016
55504TNFRSF19TAJ | TAJ-alpha | TRADE | TROYtumor necrosis factor receptor superfamily member 1913q12.11-q12.3CV:PGCnp
CV:PheWAS
10808HSPH1HSP105 | HSP105A | HSP105B | NY-CO-25heat shock protein family H (Hsp110) member 113q12.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
10240MRPS31IMOGN38 | MRP-S31 | S31mtmitochondrial ribosomal protein S3113q14.11DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
115761ARL11ARLTS1ADP ribosylation factor like GTPase 1113q14.2CV:PGCnp
9445ITM2BABRI | BRI | BRI2 | BRICD2B | E25B | E3-16 | FBD | RDGCA | imBRI2integral membrane protein 2B13q14.3CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
3839KPNA3IPOA4 | SRP1 | SRP1gamma | SRP4 | hSRP1karyopherin subunit alpha 313q14.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
6235RPS29DBA13 | S29ribosomal protein S2914qCV:PGCnp
26020LRP10LRP9 | MST087 | MSTP087LDL receptor related protein 1014q11.2CV:PGCnp
GSMA_I
PMID:cooccur
10419PRMT5HRMT1L5 | IBP72 | JBP1 | SKB1 | SKB1Hsprotein arginine methyltransferase 514q11.2CV:PGCnp
GSMA_I
Chromatin Remodeling Genes
84312BRMS1LBRMS1breast cancer metastasis-suppressor 1-like14q13.2CV:GWASdb
CV:PGCnp
6729SRP54-signal recognition particle 54kDa14q13.2CV:PGCnp
DMG:Jaffe_2016
122769LRR14-1BBLRR | LRR-1 | PPIL5leucine rich repeat protein 114q21.3CV:PGCnp
122786FRMD6C14orf31 | EX1 | Willin | c14_5320FERM domain containing 614q22.1CV:PGCnp
7597ZBTB25C14orf51 | KUP | ZNF46zinc finger and BTB domain containing 2514q23-q24CV:PGCnp
DMG:Wockner_2014
4990SIX6MCOPCT2 | ODRMD | OPTX2 | Six9SIX homeobox 614q23.1CV:PGCnp
DMG:Jaffe_2016
81537SGPP1SPPase1sphingosine-1-phosphate phosphatase 114q23.2CV:PGCnp
PMID:cooccur
22890ZBTB1ZNF909zinc finger and BTB domain containing 114q23.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
677ZFP36L1BRF1 | Berg36 | ERF-1 | ERF1 | RNF162B | TIS11B | cMG1ZFP36 ring finger protein-like 114q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
26037SIPA1L1E6TP1signal-induced proliferation-associated 1 like 114q24.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10972TMED10P24(DELTA) | S31I125 | S31III125 | TMP21 | Tmp-21-I | p23 | p24d1transmembrane p24 trafficking protein 1014q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5663PSEN1AD3 | FAD | PS-1 | PS1 | S182presenilin 114q24.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
53981CPSF2CPSF100cleavage and polyadenylation specific factor 214q31.1CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
1983EIF5EIF-5 | EIF-5Aeukaryotic translation initiation factor 514q32.32CV:PGCnp
DNM:Girard_2011
Expression
CompositeSet
23368PPP1R13BASPP1 | p53BP2-like | p85protein phosphatase 1 regulatory subunit 13B14q32.33CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Ambalavanan_2016
321APBA2D15S1518E | HsT16821 | LIN-10 | MGC:14091 | MINT2 | X11-BETA | X11Lamyloid beta precursor protein binding family A member 215q11-q12CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
Potential synaptic genes
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
283742FAM98B-family with sequence similarity 98 member B15q14CV:PGCnp
2923PDIA3ER60 | ERp57 | ERp60 | ERp61 | GRP57 | GRP58 | HEL-S-269 | HEL-S-93n | HsT17083 | P58 | PI-PLCprotein disulfide isomerase family A member 315q15CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
117155CATSPER2-cation channel sperm associated 215q15.3CV:PGCnp
10169SERF24F5REL | FAM2C | H4F5REL | HsT17089small EDRK-rich factor 215q15.3CV:PGCnp
80237ELL3-elongation factor for RNA polymerase II 315q15.3CV:PGCnp
DMG:Jaffe_2016
51496CTDSPL2HSPC058 | HSPC129CTD small phosphatase like 215q15.3-q21.1CV:PGCnp
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
9101USP8HumORF8 | SPG59 | UBPYubiquitin specific peptidase 815q21.2CV:PGCnp
DMG:Nishioka_2013
2252FGF7HBGF-7 | KGFfibroblast growth factor 715q21.2CV:PGCnp
PMID:cooccur
2553GABPB1BABPB2 | E4TF1 | E4TF1-47 | E4TF1-53 | E4TF1B | GABPB | GABPB-1 | GABPB2 | NRF2B1 | NRF2B2GA binding protein transcription factor beta subunit 115q21.2CV:PGCnp
DMG:Jaffe_2016
29766TMOD3UTMODtropomodulin 315q21.2CV:PGCnp
DMG:Jaffe_2016
3990LIPCHDLCQ12 | HL | HTGL | LIPHlipase C, hepatic type15q21.3CV:PGCnp
PMID:cooccur
102ADAM10AD10 | AD18 | CD156c | CDw156 | HsT18717 | MADM | RAK | kuzADAM metallopeptidase domain 1015q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10116FEM1BF1A-ALPHA | F1AA | FEM1-betafem-1 homolog b (C. elegans)15q22DMG:Nishioka_2013
771CA12CA-XII | CAXII | HsT18816 | T18816carbonic anhydrase XII15q22CV:PGCnp
DMG:Wockner_2014
8925HERC1p532 | p619HECT and RLD domain containing E3 ubiquitin protein ligase family member 115q22CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
27020NPTNGP55 | GP65 | SDFR1 | SDR1 | np55 | np65neuroplastin15q22CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
51762RAB8B-RAB8B, member RAS oncogene family15q22.2CV:PGCnpINTRACELLULAR TRAFFICKING
585BBS4-Bardet-Biedl syndrome 415q22.3-q23CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
197021LCTLKLG | KLPHlactase like15q22.31CV:PGCnp
DMG:Wockner_2014
26035GLCEHSEPIglucuronic acid epimerase15q23CV:PGCnp
10363HMG20AHMGX1 | HMGXB1high mobility group 20A15q24CV:PGCnp
PMID:cooccur
1445CSK-c-src tyrosine kinase15q24.1CV:PGCnp
Network
PMID:cooccur
1543CYP1A1AHH | AHRR | CP11 | CYP1 | CYPIA1 | P1-450 | P450-C | P450DXcytochrome P450 family 1 subfamily A member 115q24.1CV:PGCnp
CV:PheWAS
PMID:cooccur
79834PEAK1SGK269pseudopodium enriched atypical kinase 115q24.3CV:GWASdb
CV:PGCnp
DMG:Montano_2016
54469ZFAND6AWP1 | ZA20D3 | ZFAND5Bzinc finger AN1-type containing 615q25.1CV:GWASdb
CV:PGCnp
Network
2184FAH-fumarylacetoacetate hydrolase (fumarylacetoacetase)15q25.1CV:PGCnp
DMG:Nishioka_2013
11057ABHD2HS1-2 | LABH2 | PHPS1-2abhydrolase domain containing 215q26.1CV:PGCnp
Expression
64319FBRSFBS | FBS1fibrosin16p11.2DMG:Jaffe_2016
GSMA_IIE
7041TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 116p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
57149LYRM1A211C6.1LYR motif containing 116p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
3683ITGALCD11A | LFA-1 | LFA1Aintegrin subunit alpha L16p11.2CV:PGCnp
GO_Annotation
GSMA_IIE
112479ERI2EXOD1 | ZGRF5ERI1 exoribonuclease family member 216p12.3CV:PGCnp
GSMA_IIE
123879DCUN1D344M2.4 | SCCRO3defective in cullin neddylation 1 domain containing 316p12.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
7755ZNF205RhitH | ZNF210 | Zfp13zinc finger protein 20516p13.3CV:PGCnp
388272C16orf87-chromosome 16 open reading frame 8716q11.2CV:PGCnp
DMG:Jaffe_2016
1540CYLDBRSS | CDMT | CYLD1 | CYLDI | EAC | MFT | MFT1 | SBS | TEM | USPL2CYLD lysine 63 deubiquitinase16q12.1CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
10294DNAJA2CPR3 | DJ3 | DJA2 | DNAJ | DNJ3 | HIRIP4 | PRO3015 | RDJ2DnaJ heat shock protein family (Hsp40) member A216q12.1CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
5934RBL2P130 | Rb2retinoblastoma-like 216q12.2CV:PGCnp
89970RSPRY1SEMDFAring finger and SPRY domain containing 116q13CV:PGCnp
80011FAM192AC16orf94 | CDA018 | CDA10 | NIP30family with sequence similarity 192 member A16q13CV:PGCnp
51090PLLPPMLP | TM4SF11plasmolipin16q13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
2806GOT2KAT4 | KATIV | mitAATglutamic-oxaloacetic transaminase 216q21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
57610RANBP10-RAN binding protein 1016q22.1CV:PGCnp
DMG:Jaffe_2016
55815TSNAXIP1TXI1translin-associated factor X interacting protein 116q22.1CV:PGCnp
DMG:Wockner_2014
80262C16orf70C16orf6 | LIN10 | lin-10chromosome 16 open reading frame 7016q22.1CV:PGCnp
PMID:cooccur
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
9564BCAR1CAS | CAS1 | CASS1 | CRKAS | P130Casbreast cancer anti-estrogen resistance 116q23.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Ascano FMRP targets
79726WDR59FP977WD repeat domain 5916q23.1CV:GWASdb
CV:PGCnp
124359CDYL2PCCP1chromodomain protein, Y-like 216q23.2CV:GWASdb
CV:PGCnp
9100USP10UBPOubiquitin specific peptidase 1016q24.1CV:PGCnp
DNM:Guipponi_2014
3394IRF8H-ICSBP | ICSBP | ICSBP1 | IMD32A | IMD32B | IRF-8interferon regulatory factor 816q24.1CV:PGCnp
146691TOM1L2-target of myb1 like 2 membrane trafficking protein17p11.2CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
10750GRAP-GRB2-related adaptor protein17p11.2CV:PGCnp
10517FBXW10Fbw10 | HREP | SM25H2 | SM2SH2F-box and WD repeat domain containing 1017p12CV:PGCnp
23746AIPL1AIPL2 | LCA4aryl hydrocarbon receptor interacting protein-like 117p13.1CV:PGCnp
DMG:Wockner_2014
5187PER1PER | RIGUI | hPERperiod circadian clock 117p13.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
7157TP53BCC7 | LFS1 | P53 | TRP53tumor protein p5317p13.1Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
54478FAM64ACATS | RCS1family with sequence similarity 64 member A17p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
727910TLCD2-TLC domain containing 217p13.3CV:PGCnp
DMG:Wockner_2014
11232POLG2HP55 | MTPOLB | PEOA4 | POLB | POLG-BETA | POLGBpolymerase (DNA) gamma 2, accessory subunit17qCV:PGCnp
DMG:Jaffe_2016
6388SDF2-stromal cell derived factor 217q11.2DMG:Jaffe_2016
1362CPDGP180carboxypeptidase D17q11.2CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
9572NR1D1EAR1 | THRA1 | THRAL | ear-1 | hRevnuclear receptor subfamily 1 group D member 117q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
6532SLC6A45-HTT | 5-HTTLPR | 5HTT | HTT | OCD1 | SERT | SERT1 | hSERTsolute carrier family 6 member 417q11.2ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
SEROTONIN
55813UTP6C17orf40 | HCA66UTP6, small subunit processome component17q11.2CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
11276SYNRGAP1GBP1 | SYNGsynergin, gamma17q12CNV:YES
CV:PGCnp
79893GGNBP2DIF-3 | DIF3 | LCRG1 | LZK1 | ZFP403 | ZNF403gametogenetin binding protein 217q12CNV:YES
CV:PGCnp
Ascano FMRP targets
7703PCGF2MEL-18 | RNF110 | ZNF144polycomb group ring finger 217q12CV:PGCnpChromatin Remodeling Genes
55106SLFN12SLFN3schlafen family member 1217q12DMG:Wockner_2014
5691PSMB3HC10-IIproteasome subunit beta 317q12CV:PGCnp
Network
6346CCL1I-309 | P500 | SCYA1 | SISe | TCA3C-C motif chemokine ligand 117q12CV:PGCnp
PMID:cooccur
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
7283TUBG1CDCBM4 | GCP-1 | TUBG | TUBGCP1tubulin gamma 117q21CV:PGCnp
Network
535ATP6V0A1ATP6N1 | ATP6N1A | Stv1 | VPP1 | Vph1 | a1ATPase H+ transporting V0 subunit a117q21CV:PGCnp
DMG:vanEijk_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
162427FAM134C-family with sequence similarity 134 member C17q21.2CV:PGCnp
DMG:Jaffe_2016
6774STAT3ADMIO | APRF | HIESsignal transducer and activator of transcription 3 (acute-phase response factor)17q21.31CV:PGCnp
CV:PheWAS
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
4077NBR11A1-3B | IAI3B | M17S2 | MIG19neighbor of BRCA1 gene 117q21.31CV:PGCnp
Network
Ascano FMRP targets
996CDC27ANAPC3 | APC3 | CDC27Hs | D0S1430E | D17S978E | H-NUC | HNUC | NUC2cell division cycle 2717q21.32CV:PGCnp
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
9043SPAG9CT89 | HLC-6 | HLC4 | HLC6 | JIP-4 | JIP4 | JLP | PHET | PIG6sperm associated antigen 917q21.33CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
51321AMZ2-archaelysin family metallopeptidase 217q24.2CV:PGCnp
DMG:Jaffe_2016
5608MAP2K6MAPKK6 | MEK6 | MKK6 | PRKMK6 | SAPKK-3 | SAPKK3mitogen-activated protein kinase kinase 617q24.3CV:PGCnp
10476ATP5HATPQATP synthase, H+ transporting, mitochondrial Fo complex subunit D17q25CV:PGCnp
DMG:Jaffe_2016
23210JMJD6PSR | PTDSR | PTDSR1jumonji domain containing 617q25CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
Chromatin Remodeling Genes
4729NDUFV2CI-24kNADH:ubiquinone oxidoreductase core subunit V218p11.22Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
9989PPP4R1MEG1 | PP4(Rmeg) | PP4R1protein phosphatase 4 regulatory subunit 118p11.22CV:PGCnpAscano FMRP targets
7050TGIF1HPE4 | TGIFTGFB induced factor homeobox 118p11.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4864NPC1NPCNiemann-Pick disease, type C118q11.2PMID:cooccur
10982MAPRE2CSCSC2 | EB1 | EB2 | RP1microtubule associated protein RP/EB family member 218q12.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
4092SMAD7CRCS3 | MADH7 | MADH8SMAD family member 718q21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
10194TSHZ1CAA | NY-CO-33 | SDCCAG33 | TSH1teashirt zinc finger homeobox 118q22.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
284273ZADH2-zinc binding alcohol dehydrogenase domain containing 218q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5731PTGER1EP1prostaglandin E receptor 119p13.1DMG:Wockner_2014
8178ELLC19orf17 | ELL1 | MEN | PPP1R68elongation factor for RNA polymerase II19p13.1CV:PGCnp
170463SSBP4-single stranded DNA binding protein 419p13.1CV:PGCnp
DMG:Wockner_2014
79016DDA1C19orf58 | PCIA1DET1 and DDB1 associated 119p13.11CV:PGCnp
DMG:Wockner_2014
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
1994ELAVL1ELAV1 | HUR | Hua | MelGELAV like RNA binding protein 119p13.2CV:PGCnp
79088ZNF426K-RBPzinc finger protein 42619p13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
29911HOOK2HK2hook microtubule-tethering protein 219p13.2CV:PGCnp
3726JUNBAP-1jun B proto-oncogene19p13.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
4616GADD45BGADD45BETA | MYD118growth arrest and DNA damage inducible beta19p13.3CV:PGCnp
PMID:cooccur
4946OAZ1AZI | OAZornithine decarboxylase antizyme 119p13.3CV:PGCnp
DMG:Wockner_2014
1455CSNK1G2CK1g2casein kinase 1 gamma 219p13.3CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
51129ANGPTL4ARP4 | FIAF | HARP | HFARP | NL2 | PGAR | TGQTL | UNQ171 | pp1158angiopoietin like 419p13.3CV:PGCnp
GO_Annotation
PMID:cooccur
10870HCSTDAP10 | KAP10 | PIK3APhematopoietic cell signal transducer19q13.1DMG:vanEijk_2014
PMID:cooccur
84807NFKBIDIkappaBNS | TA-NFKBHNFKB inhibitor delta19q13.12PMID:cooccur
11100HNRNPUL1E1B-AP5 | E1BAP5 | HNRPUL1heterogeneous nuclear ribonucleoprotein U-like 119q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
55095SAMD4BSMGB | Smaug2sterile alpha motif domain containing 4B19q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
2067ERCC1COFS4 | RAD10 | UV20excision repair cross-complementation group 119q13.32DMG:Jaffe_2016
5518PPP2R1AMRD36 | PP2A-Aalpha | PP2AAALPHA | PR65Aprotein phosphatase 2 regulatory subunit A, alpha19q13.41CV:GWASdb
CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
963CD53MOX44 | TSPAN25CD53 molecule1p13CV:GWASdb
CV:PGCnp
GSMA_I
79679VTCN1B7-H4 | B7H4 | B7S1 | B7X | B7h.5 | PRO1291 | VCTN1V-set domain containing T cell activation inhibitor 11p13.1CV:PGCnp
GSMA_I
GSMA_IIA
914CD2LFA-2 | SRBC | T11CD2 molecule1p13.1CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
10768AHCYL1DCAL | IRBIT | PPP1R78 | PRO0233 | XPVKONAadenosylhomocysteinase like 11p13.2CV:PGCnp
GSMA_I
CompositeSet
64858DCLRE1BAPOLLO | SNM1B | SNMIBDNA cross-link repair 1B1p13.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
5906RAP1AC21KG | G-22K | KREV-1 | KREV1 | RAP1 | SMGP21RAP1A, member of RAS oncogene family1p13.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1435CSF1CSF-1 | MCSFcolony stimulating factor 11p13.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
29957SLC25A24APC1 | SCAMC-1solute carrier family 25 member 241p13.3CV:PGCnp
6301SARSSERRS | SERSseryl-tRNA synthetase1p13.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
3738KCNA3HGK5 | HLK3 | HPCN3 | HUKIII | KV1.3 | MK3 | PCN3potassium voltage-gated channel subfamily A member 31p13.3CV:GWASdb
CV:PGCnp
GSMA_I
8915BCL10CARMEN | CIPER | CLAP | IMD37 | c-E10 | mE10B-cell CLL/lymphoma 101p22CV:PGCnp
GO_Annotation
388650FAM69A-family with sequence similarity 69 member A1p22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
2633GBP1-guanylate binding protein 11p22.2CV:PGCnp
PMID:cooccur
55144LRRC8DLRRC5leucine-rich repeat containing 8 family member D1p22.2CV:PGCnp
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
11080DNAJB4DNAJW | DjB4 | HLJ1DnaJ heat shock protein family (Hsp40) member B41p31.1CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
CompositeSet
4774NFIACTF | NF-I/A | NF1-A | NFI-A | NFI-Lnuclear factor I/A1p31.3-p31.2CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
10420TESK2-testis-specific kinase 21p32CV:PGCnp
DMG:Jaffe_2016
5538PPT1CLN1 | INCL | PPTpalmitoyl-protein thioesterase 11p32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10450PPIECYP-33 | CYP33peptidylprolyl isomerase E1p32CV:GWASdb
CV:PGCnp
26994RNF11CGI-123 | SID1669ring finger protein 111p32CV:GWASdb
CV:PGCnp
Network
6342SCP2NLTP | NSL-TP | SCP-2 | SCP-CHI | SCP-X | SCPXsterol carrier protein 21p32CV:PGCnp
DMG:Wockner_2014
23648SSBP3CSDP | SSDP | SSDP1single stranded DNA binding protein 31p32.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
54558SPATA6HASH | SRF-1 | SRF1spermatogenesis associated 61p33CV:PGCnp
DMG:Jaffe_2016
11124FAF1CGI-03 | HFAF1s | UBXD12 | UBXN3A | hFAF1Fas associated factor 11p33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
79639TMEM53NET4transmembrane protein 531p34.1DMG:Jaffe_2016
6513SLC2A1CSE | DYT17 | DYT18 | DYT9 | EIG12 | GLUT | GLUT-1 | GLUT1 | GLUT1DS | HTLVR | PED | SDCHCNsolute carrier family 2 member 11p34.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
CELL METABOLISM
10487CAP1CAP | CAP1-PENCAP, adenylate cyclase-associated protein 1 (yeast)1p34.2CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
22887FOXJ3-forkhead box J31p34.2CV:PGCnp
DMG:Jaffe_2016
84967LSM10MST074 | MSTP074LSM10, U7 small nuclear RNA associated1p34.3CV:PGCnp
DMG:Wockner_2014
Network
79647AKIRIN1C1orf108 | STRF2akirin 11p34.3CV:GWASdb
CV:PGCnp
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
83667SESN2HI95 | SES2 | SEST2sestrin 21p35.3CV:PGCnp
DMG:Wockner_2014
64744SMAP2SMAP1Lsmall ArfGAP21p35.3-p34.1CV:PGCnp
DNM:Xu_2012
CompositeSet
6924TCEB3EloA | SIII | SIII p110 | TCEB3Atranscription elongation factor B subunit 31p36.1CV:PGCnp
DMG:Jaffe_2016
55629PNRC2-proline rich nuclear receptor coactivator 21p36.11DMG:Wockner_2014
11313LYPLA2APT-2 | APT2 | DJ886K2.4lysophospholipase II1p36.11CV:PGCnp
DMG:Wockner_2014
50809HP1BP3HP1-BP74 | HP1BP74heterochromatin protein 1 binding protein 31p36.12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
84196USP48RAP1GA1 | USP31ubiquitin specific peptidase 481p36.12CV:PGCnp
55920RCC2TD-60regulator of chromosome condensation 21p36.13CV:PGCnp
DMG:Wockner_2014
51107APH1A6530402N02Rik | APH-1 | APH-1A | CGI-78aph-1 homolog A, gamma secretase subunit1p36.13-q31.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
NEUROTROPHIN SIGNALING
11315PARK7DJ-1 | DJ1 | HEL-S-67pParkinsonism associated deglycase1p36.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
9557CHD1LALC1 | CHDLchromodomain helicase DNA binding protein 1-like1q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
9869SETDB1ESET | H3-K9-HMTase4 | KG1T | KMT1E | TDRD21SET domain bifurcated 11q21CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
6277S100A62A9 | 5B10 | CABP | CACY | PRAS100 calcium binding protein A61q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
58497PRUNEDRES-17 | DRES17 | HTCD37prune exopolyphosphatase1q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
10623POLR3CRPC3 | RPC62polymerase (RNA) III subunit C1q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
27246RNF115BCA2 | ZNF364ring finger protein 1151q21.1CNV:YES
CV:PGCnp
23381SMG5EST1B | LPTS-RP1 | LPTSRP1 | SMG-5SMG5 nonsense mediated mRNA decay factor1q21.2CV:PGCnp
GSMA_I
GSMA_IIA
8337HIST2H2AA3H2A | H2A.2 | H2A/O | H2A/q | H2AFO | H2a-615 | HIST2H2AAhistone cluster 2, H2aa31q21.2DEG:Sanders_2013
GSMA_I
GSMA_IIA
8349HIST2H2BEGL105 | H2B | H2B.1 | H2BFQ | H2BGL105 | H2BQhistone cluster 2, H2be1q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
80308FLAD1FAD1 | FADS | PP591flavin adenine dinucleotide synthetase 11q21.3DMG:vanEijk_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
55204GOLPH3LGPP34Rgolgi phosphoprotein 3 like1q21.3CV:PGCnp
GSMA_I
GSMA_IIA
55793FAM63A-family with sequence similarity 63 member A1q21.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
GSMA_IIA
8394PIP5K1A-phosphatidylinositol-4-phosphate 5-kinase, type I, alpha1q21.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
GSMA_IIA
5710PSMD4AF | AF-1 | ASF | MCB1 | Rpn10 | S5A | pUB-R5proteasome 26S subunit, non-ATPase 41q21.3CV:PGCnp
GSMA_I
GSMA_IIA
64218SEMA4ACORD10 | RP35 | SEMAB | SEMBsemaphorin 4A1q22CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
10654PMVKHUMPMKI | PMK | PMKA | PMKASE | POROK1phosphomevalonate kinase1q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
55870ASH1LASH1 | ASH1L1 | KMT2Hash1 (absent, small, or homeotic)-like (Drosophila)1q22CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
7391USF1FCHL | FCHL1 | HYPLIP1 | MLTF | MLTFI | UEF | bHLHb11upstream transcription factor 11q22-q23GSMA_IIA
PMID:cooccur
93185IGSF8CD316 | CD81P3 | EWI-2 | EWI2 | KCT-4 | LIR-D1 | PGRLimmunoglobulin superfamily member 81q23.1CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
477ATP1A2FHM2 | MHP2ATPase Na+/K+ transporting subunit alpha 21q23.2CV:GWAScat
CV:PGCnp
GSMA_I
GSMA_IIA
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
4063LY9CD229 | SLAMF3 | hly9 | mLY9lymphocyte antigen 91q23.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
8674VAMP4VAMP-4 | VAMP24vesicle associated membrane protein 41q24-q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
EXOCYTOSIS
26092TOR1AIP1LAP1 | LAP1Btorsin 1A interacting protein 11q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
9887SMG7C1orf16 | EST1C | SGA56MSMG7 nonsense mediated mRNA decay factor1q25CV:PGCnp
DMG:Jaffe_2016
84614ZBTB37D430004I08Rik | ZNF908zinc finger and BTB domain containing 371q25.1CV:PGCnp
DMG:Jaffe_2016
9588PRDX61-Cys | AOP2 | HEL-S-128m | NSGPx | PRX | aiPLA2 | p29peroxiredoxin 61q25.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5996RGS11R20 | BL34 | HEL-S-87 | IER1 | IR20regulator of G-protein signaling 11q31CV:GWASdb
CV:PGCnp
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
140609NEK7-NIMA related kinase 71q31.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
2005ELK4SAP1ELK4, ETS transcription factor1q32CV:PGCnp
DMG:Wockner_2014
55733HHATMART2 | SKI1 | Sknhedgehog acyltransferase1q32CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
254428SLC41A1MgtEsolute carrier family 41 member 11q32.1CV:GWASdb
CV:PGCnp
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
5525PPP2R5AB56A | PR61Aprotein phosphatase 2 regulatory subunit B', alpha1q32.2-q32.3CV:PGCnp
DMG:Wockner_2014
80232WDR26CDW2 | GID7 | MIP2WD repeat domain 261q42.13CV:PGCnp
DMG:Jaffe_2016
3964LGALS8Gal-8 | PCTA-1 | PCTA1 | Po66-CBPlectin, galactoside-binding, soluble, 81q43CV:PGCnp
DMG:Jaffe_2016
64216TFB2MHkp1 | mtTFB2transcription factor B2, mitochondrial1q44CV:PGCnp
DMG:Jaffe_2016
3192HNRNPUHNRNPU-AS1 | HNRPU | SAF-A | SAFA | U21.1 | hnRNP Uheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)1q44DMG:Jaffe_2016
26090ABHD12ABHD12A | BEM46L2 | C20orf22 | PHARC | dJ965G21.2abhydrolase domain containing 1220p11.21CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
Expression
CompositeSet
55968NSFL1CP47 | UBX1 | UBXD10 | UBXN2C | dJ776F14.1NSFL1 (p97) cofactor (p47)20p13CV:PGCnpEXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
2280FKBP1AFKBP-12 | FKBP-1A | FKBP1 | FKBP12 | PKC12 | PKCI2 | PPIASEFK506 binding protein 1A20p13NetworkRNA AND PROTEIN SYNTHESIS
140809SRXN1C20orf139 | Npn3 | SRX | SRX1sulfiredoxin 120p13CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
5933RBL1CP107 | PRB1 | p107retinoblastoma-like 120q11.2CV:PGCnp
DMG:Jaffe_2016
26133TRPC4APC20orf188 | PPP1R158 | TRRP4AP | TRUSStransient receptor potential cation channel subfamily C member 4 associated protein20q11.22CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
10904BLCAPBC10bladder cancer associated protein20q11.23CV:PGCnp
DMG:Jaffe_2016
2139EYA2EAB1EYA transcriptional coactivator and phosphatase 220q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
7335UBE2V1CIR1 | CROC-1 | CROC1 | UBE2V | UEV-1 | UEV1 | UEV1Aubiquitin conjugating enzyme E2 V120q13.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
4773NFATC2NFAT1 | NFATPnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 220q13.2CV:GWASdb
CV:PGCnp
Network
8675STX16SYN16syntaxin 1620q13.32CV:PGCnp
GO_Annotation
INTRACELLULAR TRAFFICKING
6782HSPA13STCHheat shock protein family A (Hsp70) member 1321q11CV:PGCnp
64092SAMSN1HACS1 | NASH1 | SASH2 | SH3D6B | SLy2SAM domain, SH3 domain and nuclear localization signals 121q11CV:PGCnp
PMID:cooccur
8204NRIP1RIP140nuclear receptor interacting protein 121q11.2CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
571BACH1BACH-1 | BTBD24BTB and CNC homology 1, basic leucine zipper transcription factor 121q22.11CV:PGCnp
DMG:Jaffe_2016
1859DYRK1ADYRK | DYRK1 | HP86 | MNB | MNBH | MRD7dual specificity tyrosine phosphorylation regulated kinase 1A21q22.13CV:PGCnp
GO_Annotation
10311DSCR3DCRA | DSCRADSCR3 arrestin fold containing21q22.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7327UBE2G2UBC7ubiquitin conjugating enzyme E2 G221q22.3CV:PGCnp
56478EIF4ENIF14E-T | Clast4eukaryotic translation initiation factor 4E nuclear import factor 122q11.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
PMID:cooccur
CompositeSet
135ADORA2AA2aR | ADORA2 | RDC8adenosine A2a receptor22q11.23GO_Annotation
GSMA_I
Network
PMID:cooccur
GPCR SIGNALLING
2953GSTT2-glutathione S-transferase theta 2 (gene/pseudogene)22q11.23CV:PGCnp
Expression
GSMA_I
PMID:cooccur
150275CCDC117dJ366L4.1coiled-coil domain containing 11722q12.1CV:PGCnp
GSMA_I
7494XBP1TREB-5 | TREB5 | XBP-1 | XBP2X-box binding protein 122q12.1|22q12Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
25777SUN2UNC84BSad1 and UNC84 domain containing 222q13.1CV:PGCnp
23492CBX7-chromobox 722q13.1CV:PGCnp
DMG:Nishioka_2013
9929JOSD1dJ508I15.2Josephin domain containing 122q13.1CV:PGCnp
DMG:Wockner_2014
6767ST13AAG2 | FAM10A1 | FAM10A4 | HIP | HOP | HSPABP | HSPABP1 | P48 | PRO0786 | SNC6suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)22q13.2CV:PGCnp
PMID:cooccur
63929XPNPEP3APP3 | ICP55 | NPHPL1X-prolyl aminopeptidase 3, mitochondrial22q13.2CV:PGCnp
9402GRAP2GADS | GRAP-2 | GRB2L | GRBLG | GRID | GRPL | GrbX | Grf40 | Mona | P38GRB2-related adaptor protein 222q13.2CV:GWASdb
CV:PGCnp
Network
7380UPK3AUP3A | UPIII | UPIIIA | UPK3uroplakin 3A22q13.31DMG:Jaffe_2016
2673GFPT1CMS12 | CMSTA1 | GFA | GFAT | GFAT 1 | GFAT1 | GFAT1m | GFPT | GFPT1L | MSLGglutamine--fructose-6-phosphate transaminase 12p13CV:PGCnp
GO_Annotation
Ascano FMRP targets
5966RELC-Relv-rel avian reticuloendotheliosis viral oncogene homolog2p13-p12CV:GWASdb
CV:PGCnp
CV:PheWAS
Network
PMID:cooccur
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
27436EML4C2orf2 | ELP120 | EMAP-4 | EMAPL4 | ROPP120echinoderm microtubule associated protein like 42p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
790CADCDG1Zcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase2p22-p21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
10153CEBPZCBF | CBF2 | HSP-CBF | NOC1CCAAT/enhancer binding protein zeta2p22.2CV:PGCnp
DMG:Nishioka_2013
LK:YES
Ascano FMRP targets
5500PPP1CBHEL-S-80p | PP-1B | PP1B | PP1beta | PPP1CDprotein phosphatase 1 catalytic subunit beta2p23CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
8884SLC5A6SMVTsolute carrier family 5 member 62p23CV:PGCnp
DMG:Wockner_2014
29959NRBP1BCON3 | MADM | MUDPNP | NRBPnuclear receptor binding protein 12p23CV:PGCnp
DEG:Maycox_2009
GO_Annotation
3030HADHAECHA | GBP | HADH | LCEH | LCHAD | MTPA | TP-ALPHAhydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit2p23CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9577BREBRCC4 | BRCC45brain and reproductive organ-expressed (TNFRSF1A modulator)2p23.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10669CGREF1CGR11cell growth regulator with EF-hand domain 12p23.3CV:PGCnp
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
84696ABHD1LABH1abhydrolase domain containing 12p23.3CV:PGCnp
64080RBKSRBSKribokinase2p23.3CV:PGCnp
DMG:Wockner_2014
9475ROCK2ROCK-IIRho associated coiled-coil containing protein kinase 22p24CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9448MAP4K4FLH21957 | HEL-S-31 | HGK | MEKKK4 | NIKmitogen-activated protein kinase kinase kinase kinase 42q11.2-q12CV:PGCnp
DMG:Nishioka_2013
DNM:Guipponi_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7535ZAP70SRK | STCD | STD | TZK | ZAP-70zeta chain of T cell receptor associated protein kinase 70kDa2q12CV:PGCnp
GO_Annotation
GSMA_I
6574SLC20A1GLVR1 | Glvr-1 | PIT1 | PiT-1solute carrier family 20 member 12q13CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
26122EPC2EPC-LIKEenhancer of polycomb homolog 22q23.1CV:PGC128
CV:PGCnp
CV:PheWAS
GSMA_I
GSMA_IIA
55660PRPF40AFBP-11 | FBP11 | FLAF1 | FNBP3 | HIP-10 | HIP10 | HYPA | NY-REN-6 | Prp40pre-mRNA processing factor 40 homolog A2q23.3CV:PGCnp
Expression
GSMA_IIA
Network
Ascano FMRP targets
151188ARL6IP6AIP-6 | AIP6 | PFAAP1ADP ribosylation factor like GTPase 6 interacting protein 62q23.3CV:PGCnp
GSMA_IIA
8604SLC25A12AGC1 | ARALARsolute carrier family 25 member 122q24CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
22837COBLL1COBLR1cordon-bleu WH2 repeat protein like 12q24.3CV:GWASdb
CV:PGCnp
GSMA_IIA
5163PDK1-pyruvate dehydrogenase kinase 12q31.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5378PMS1HNPCC3 | MLH2 | PMSL1 | hPMS1PMS1 homolog 1, mismatch repair system component2q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
10787NCKAP1HEM2 | NAP1 | NAP125 | p125Nap1NCK associated protein 12q32CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
94101ORMDL1-ORMDL sphingolipid biosynthesis regulator 12q32CV:PGCnp
DMG:Jaffe_2016
DNM:Guipponi_2014
54842MFSD6MMR2 | hMMR2major facilitator superfamily domain containing 62q32.2CV:PGCnp
940CD28Tp44CD28 molecule2q33CV:PGCnp
PMID:cooccur
80219COQ10B-coenzyme Q10B2q33.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
3417IDH1HEL-216 | HEL-S-26 | IDCD | IDH | IDP | IDPC | PICDisocitrate dehydrogenase 1 (NADP+)2q33.3CV:PGCnp
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL METABOLISM
Chromatin Remodeling Genes
1385CREB1CREB | CREB-1cAMP responsive element binding protein 12q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
4133MAP2MAP2A | MAP2B | MAP2Cmicrotubule associated protein 22q34-q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
8452CUL3CUL-3 | PHA2Ecullin 32q36.2CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
51719CAB39CGI-66 | MO25calcium binding protein 392q37.1CV:PGCnp
DMG:Wockner_2014
10550ARL6IP5DERP11 | GTRAP3-18 | HSPC127 | JWA | PRAF3 | Yip6b | addicsin | hp22 | jmxADP ribosylation factor like GTPase 6 interacting protein 53p14DMG:Jaffe_2016
GO_Annotation
9039UBA3NAE2 | UBE1C | hUBA3ubiquitin like modifier activating enzyme 33p14.1CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
8618CADPSCADPS1 | CAPS | CAPS1 | UNC-31Ca2+ dependent secretion activator3p14.2CV:GWASdb
CV:PGCnp
Network
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
55193PBRM1BAF180 | PB1polybromo 13p21CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
Chromatin Remodeling Genes
6988TCTA-T-cell leukemia translocation altered3p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10425ARIH2ARI2 | TRIAD1ariadne RBR E3 ubiquitin protein ligase 23p21CV:PGCnp
Network
1230CCR1CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1C-C motif chemokine receptor 13p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9730VPRBPDCAF1Vpr (HIV-1) binding protein3p21.2CV:PGCnpAscano FMRP targets
23132RAD54L2ARIP4 | HSPC325 | SRISNF2LRAD54-like 2 (S. cerevisiae)3p21.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
CompositeSet
Ascano FMRP targets
387RHOAARH12 | ARHA | RHO12 | RHOH12ras homolog family member A3p21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Potential synaptic genes
7375USP4UNP | Unphubiquitin specific peptidase 4 (proto-oncogene)3p21.3CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
Ascano FMRP targets
10180RBM63G2 | DEF-3 | DEF3 | HLC-11 | NY-LU-12 | g16RNA binding motif protein 63p21.3CV:PGCnp
4292MLH1COCA2 | FCC2 | HNPCC | HNPCC2 | hMLH1mutL homolog 13p21.3CV:PGCnp
GSMA_I
7867MAPKAPK33PK | MAPKAP-K3 | MAPKAP3 | MAPKAPK-3 | MK-3mitogen-activated protein kinase-activated protein kinase 33p21.3CV:PGCnp
DMG:Jaffe_2016
1524CX3CR1CCRL1 | CMKBRL1 | CMKDR1 | GPR13 | GPRV28 | V28C-X3-C motif chemokine receptor 13p21.3CV:PGCnp
PMID:cooccur
1232CCR3CC-CKR-3 | CD193 | CKR3 | CMKBR3C-C motif chemokine receptor 33p21.3CV:PGCnp
PMID:cooccur
11180WDR6-WD repeat domain 63p21.31CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
5333PLCD1NDNC3 | PLC-IIIphospholipase C delta 13p22-p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
9852EPM2AIP1-EPM2A (laforin) interacting protein 13p22.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
112616CMTM7CKLFSF7CKLF like MARVEL transmembrane domain containing 73p22.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GSMA_I
8850KAT2BCAF | P/CAF | PCAFlysine acetyltransferase 2B3p24CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
23225NUP210GP210 | POM210nucleoporin 210kDa3p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
CompositeSet
25917THUMPD3-THUMP domain containing 33p25.3CV:PGCnp
84864MINAMDIG | MINA53 | NO52 | ROXMYC induced nuclear antigen3q11.2CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
116064LRRC58-leucine rich repeat containing 583q13.33CV:PGCnp
DMG:Jaffe_2016
84925DIRC2RCC4disrupted in renal carcinoma 23q21.1CV:PGCnp
79663HSPBAP1PASS1HSPB1 associated protein 13q21.1CV:PGCnp
131076CCDC58-coiled-coil domain containing 583q21.1DMG:Jaffe_2016
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
51163DBR1-debranching RNA lariats 13q22.3CV:PGCnp
DMG:Montano_2016
285195SLC9A9AUTS16 | NHE9solute carrier family 9 member A93q24CV:PGCnp
4154MBNL1EXP | MBNLmuscleblind like splicing regulator 13q25CV:PGCnp
GO_Annotation
PMID:cooccur
6498SKILSNO | SnoA | SnoI | SnoNSKI-like proto-oncogene3q26CV:PGCnp
Network
PMID:cooccur
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
55892MYNNOSZF | SBBIZ1 | ZBTB31 | ZNF902myoneurin3q26.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
79718TBL1XR1C21 | DC42 | IRA1 | TBLR1transducin (beta)-like 1 X-linked receptor 13q26.32CV:GWASdb
CV:PGCnp
9370ADIPOQACDC | ACRP30 | ADIPQTL1 | ADPN | APM-1 | APM1 | GBP28adiponectin, C1Q and collagen domain containing3q27CV:PGCnp
PMID:cooccur
84248FYTTD1UIFforty-two-three domain containing 13q29CV:PGCnp
DMG:Jaffe_2016
132299OCIAD2-OCIA domain containing 24p11CV:PGCnp
57205ATP10DATPVDATPase phospholipid transporting 10D (putative)4p12CV:GWASdb
CV:PGCnp
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
254251LCORLMLR1ligand dependent nuclear receptor corepressor like4p15.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7466WFS1CTRCT41 | WFRS | WFS | WFSLwolframin ER transmembrane glycoprotein4p16.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
118ADD1ADDAadducin 14p16.3CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
26511CHIC2BTLcysteine rich hydrophobic domain 24q11CV:PGCnp
5471PPATATASE | GPAT | PRATphosphoribosyl pyrophosphate amidotransferase4q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
10606PAICSADE2 | ADE2H1 | AIRC | PAISphosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase4q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
26228STAP1BRDG1 | STAP-1signal transducing adaptor family member 14q13.2CV:PGCnp
3627CXCL10C7 | IFI10 | INP10 | IP-10 | SCYB10 | crg-2 | gIP-10 | mob-1C-X-C motif chemokine ligand 104q21CV:PGCnp
PMID:cooccur
950SCARB2AMRF | CD36L2 | EPM4 | HLGP85 | LGP85 | LIMP-2 | LIMPII | SR-BIIscavenger receptor class B member 24q21.1CV:PGCnp
DMG:Wockner_2014
5470PPEF2PPP7CBprotein phosphatase with EF-hand domain 24q21.1CV:PGCnp
PMID:cooccur
10983CCNICCNI1 | CYC1 | CYIcyclin I4q21.1CV:PGCnp
DMG:Wockner_2014
118429ANTXR2CMG-2 | CMG2 | HFS | ISH | JHFanthrax toxin receptor 24q21.21CV:GWAScat
CV:PGCnp
58478ENOPH1E1 | MASA | MST145 | mtnCenolase-phosphatase 14q21.22CV:PGCnp
DMG:Jaffe_2016
1977EIF4EAUTS19 | CBP | EIF4E1 | EIF4EL1 | EIF4F | eIF-4Eeukaryotic translation initiation factor 4E4q23CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
79982DNAJB14EGNR9427 | PRO34683DnaJ heat shock protein family (Hsp40) member B144q23CV:PGCnp
Expression
126ADH1CADH3alcohol dehydrogenase 1C (class I), gamma polypeptide4q23CV:PGCnp
PMID:cooccur
23173METAP1MAP1A | MetAP1Amethionyl aminopeptidase 14q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
57117INTS12INT12 | PHF22 | SBBI22integrator complex subunit 124q24CV:PGCnp
7323UBE2D3E2(17)KB3 | UBC4/5 | UBCH5Cubiquitin conjugating enzyme E2 D34q24CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
493856CISD2ERIS | Miner1 | NAF-1 | WFS2 | ZCD2CDGSH iron sulfur domain 24q24CV:PGCnp
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
79807GSTCD-glutathione S-transferase C-terminal domain containing4q24CV:PGCnp
27071DAPP1BAM32dual adaptor of phosphotyrosine and 3-phosphoinositides4q25-q27CV:PGCnp
3558IL2IL-2 | TCGF | lymphokineinterleukin 24q26-q27Association
CV:PGCnp
PMID:cooccur
80854SETD7KMT7 | SET7 | SET7/9 | SET9SET domain containing lysine methyltransferase 74q28CV:PGCnpChromatin Remodeling Genes
79658ARHGAP10GRAF2 | PS-GAP | PSGAPRho GTPase activating protein 104q31.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3660IRF2IRF-2interferon regulatory factor 24q35.1CV:PGCnp
DMG:Jaffe_2016
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
2533FYBADAP | PRO0823 | SLAP-130 | SLAP130FYN binding protein5p13.1CV:GWASdb
CV:PGCnp
GO_Annotation
64083GOLPH3GOPP1 | GPP34 | MIDAS | Vps74golgi phosphoprotein 35p13.3CV:PGCnp
PMID:cooccur
1611DAP-death-associated protein5p15.2CV:GWASdb
CV:PGCnp
PMID:cooccur
4726NDUFS6CI-13kA | CI-13kD-A | CI13KDANADH:ubiquinone oxidoreductase subunit S65p15.33CV:PGCnp
DMG:Jaffe_2016
4214MAP3K1MAPKKK1 | MEKK | MEKK 1 | MEKK1 | SRXY6mitogen-activated protein kinase kinase kinase 15q11.2CV:PGCnp
DMG:Montano_2016
Network
7518XRCC4SSMEDX-ray repair complementing defective repair in Chinese hamster cells 45q14.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
116068LYSMD3-LysM domain containing 35q14.3CV:PGCnp
DMG:Jaffe_2016
167410LIX1C5orf11 | Lftlimb and CNS expressed 15q15CV:PGCnp
DMG:Wockner_2014
4012LNPEPCAP | IRAP | P-LAP | PLAPleucyl/cystinyl aminopeptidase5q15CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
5122PCSK1BMIQ12 | NEC1 | PC1 | PC3 | SPC3proprotein convertase subtilisin/kexin type 15q15-q21CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
1105CHD1-chromodomain helicase DNA binding protein 15q15-q21CV:PGCnp
DMG:Jaffe_2016
7903ST8SIA4PST | PST1 | SIAT8D | ST8SIA-IVST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 45q21CV:PGCnp
GO_Annotation
PMID:cooccur
9140ATG12APG12 | APG12L | FBR93 | HAPG12autophagy related 125q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
153241CEP120CCDC100 | SRTD13centrosomal protein 120kDa5q23.2CV:PGCnp
DNM:McCarthy_2014
64374SIL1BAP | MSS | ULG5SIL1 nucleotide exchange factor5q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
3702ITKEMT | LPFS1 | LYK | PSCTK2IL2 inducible T-cell kinase5q31-q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
2107ETF1D5S1995 | ERF | ERF1 | RF1 | SUP45L1 | TB3-1eukaryotic translation termination factor 15q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
Expression
GSMA_I
Network
206358SLC36A1Dct1 | LYAAT1 | PAT1 | TRAMD3solute carrier family 36 member 15q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
27430MAT2BMAT-II | MATIIbeta | Nbla02999 | SDR23E1 | TGRmethionine adenosyltransferase 2B5q34CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
57179KIAA1191p33MONOX | p60MONOXKIAA11915q35.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
116369SLC26A8SPGF3 | TAT1solute carrier family 26 member 86p21DNM:Xu_2012
GSMA_I
GSMA_IIE
CompositeSet
54676GTPBP2-GTP binding protein 26p21CV:PGCnp
GSMA_IIE
896CCND3-cyclin D36p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
Network
9587MAD2L1BPCMT2MAD2L1 binding protein6p21.1CV:PGCnp
GSMA_IIE
Network
5292PIM1PIMPim-1 proto-oncogene, serine/threonine kinase6p21.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
4439MSH5G7 | MUTSH5 | NG23mutS homolog 56p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
8870IER3DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1immediate early response 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
9278ZBTB22BING1 | ZBTB22A | ZNF297 | ZNF297A | fru | fruitlesszinc finger and BTB domain containing 226p21.3CV:PGCnp
GSMA_I
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3007HIST1H1DH1.3 | H1D | H1F3 | H1s-2histone cluster 1, H1d6p21.3CV:PGCnp
GSMA_I
3013HIST1H2ADH2A.3 | H2A/g | H2AFGhistone cluster 1, H2ad6p21.3GSMA_I
3017HIST1H2BDH2B.1B | H2B/b | H2BFB | HIRIP2 | dJ221C16.6histone cluster 1, H2bd6p21.3CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
7916PRRC2ABAT2 | D6S51 | D6S51E | G2proline rich coiled-coil 2A6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
CompositeSet
1192CLIC1G6 | NCC27chloride intracellular channel 16p21.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
Network
7940LST1B144 | D6S49E | LST-1leukocyte specific transcript 16p21.3CV:PGCnp
GO_Annotation
GSMA_I
4050LTBTNFC | TNFSF3 | TNLG1C | p33lymphotoxin beta6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
2739GLO1GLOD1 | GLYI | HEL-S-74glyoxalase I6p21.3-p21.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
GSMA_IIE
PMID:cooccur
CELL METABOLISM
6732SRPK1SFRSK1SRSF protein kinase 16p21.31CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIE
85235HIST1H2AHH2A/S | H2AFALii | H2AH | dJ86C11.1histone cluster 1, H2ah6p21.33CV:PGCnp
GSMA_I
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
8294HIST1H4IH4/m | H4FM | H4Mhistone cluster 1, H4i6p21.33DNM:Fromer_2014
GSMA_I
CompositeSet
3009HIST1H1BH1 | H1.5 | H1B | H1F5 | H1s-3histone cluster 1, H1b6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
8969HIST1H2AGH2A.1b | H2A/p | H2AFP | H2AG | pH2A/fhistone cluster 1, H2ag6p22.1CV:PGCnp
DNM:Xu_2012
Expression
GSMA_I
CompositeSet
8334HIST1H2ACH2A/l | H2AFL | dJ221C16.4histone cluster 1, H2ac6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8351HIST1H3DH3/b | H3FBhistone cluster 1, H3d6p22.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
8354HIST1H3IH3.f | H3/f | H3FFhistone cluster 1, H3i6p22.1CV:PGCnp
GSMA_I
8357HIST1H3HH3/k | H3F1K | H3FKhistone cluster 1, H3h6p22.1CV:PGCnp
GSMA_I
8362HIST1H4KH4/d | H4F2iii | H4FD | dJ160A22.1histone cluster 1, H4k6p22.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8363HIST1H4JH4/e | H4F2iv | H4FE | dJ160A22.2histone cluster 1, H4j6p22.1CV:PGCnp
GSMA_I
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8365HIST1H4HH4/h | H4FHhistone cluster 1, H4h6p22.1CV:PGCnp
GSMA_I
8968HIST1H3FH3/i | H3FIhistone cluster 1, H3f6p22.2GSMA_I
3012HIST1H2AEH2A.1 | H2A.2 | H2A/a | H2AFAhistone cluster 1, H2ae6p22.2CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
8335HIST1H2ABH2A/m | H2AFMhistone cluster 1, H2ab6p22.2CV:PGCnp
GSMA_I
8345HIST1H2BHH2B/j | H2BFJhistone cluster 1, H2bh6p22.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8350HIST1H3AH3/A | H3FAhistone cluster 1, H3a6p22.2GSMA_I
8352HIST1H3CH3.1 | H3/c | H3FChistone cluster 1, H3c6p22.2CV:PGCnp
GSMA_I
8353HIST1H3EH3.1 | H3/d | H3FDhistone cluster 1, H3e6p22.2CV:PGCnp
GSMA_I
8355HIST1H3GH3/h | H3FHhistone cluster 1, H3g6p22.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
8358HIST1H3BH3/l | H3FLhistone cluster 1, H3b6p22.2CV:PGCnp
GSMA_I
8359HIST1H4AH4FAhistone cluster 1, H4a6p22.2CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
8360HIST1H4DH4/b | H4FB | dJ221C16.9histone cluster 1, H4d6p22.2CV:PGCnp
GSMA_I
8361HIST1H4FH4 | H4/c | H4FChistone cluster 1, H4f6p22.2CV:PGCnp
GSMA_I
8366HIST1H4BH4/I | H4FIhistone cluster 1, H4b6p22.2CV:PGCnp
GSMA_I
9972NUP153HNUP153 | N153nucleoporin 153kDa6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
6310ATXN1ATX1 | D6S504E | SCA1ataxin 16p23Association
CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
4739NEDD9CAS-L | CAS2 | CASL | CASS2 | HEF1neural precursor cell expressed, developmentally down-regulated 96p24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
10667FARS2COXPD14 | FARS1 | HSPC320 | PheRSphenylalanyl-tRNA synthetase 2, mitochondrial6p25.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
57128LYRM4C6orf149 | CGI-203 | COXPD19 | ISD11LYR motif containing 46p25.1DMG:Wockner_2014
GSMA_I
PMID:cooccur
4199ME1HUMNDME | MESmalic enzyme 1, NADP(+)-dependent, cytosolic6q12CV:PGCnp
4907NT5ECALJA | CD73 | E5NT | NT | NT5 | NTE | eN | eNT5'-nucleotidase ecto6q14-q21CV:GWASdb
CV:PGCnp
55754TMEM30AC6orf67 | CDC50Atransmembrane protein 30A6q14.1CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
1081CGACG-ALPHA | FSHA | GPHA1 | GPHa | HCG | LHA | TSHAglycoprotein hormones, alpha polypeptide6q14.3CV:PGCnp
PMID:cooccur
112495GTF3C6C6orf51 | TFIIIC35 | bA397G5.3general transcription factor IIIC subunit 66q21CV:PGCnp
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
23097CDK19CDC2L6 | CDK11 | bA346C16.3cyclin-dependent kinase 196q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
27244SESN1PA26 | SEST1sestrin 16q21CV:PGCnp
285753CEP57L1C6orf182 | bA487F23.2 | cep57Rcentrosomal protein 57kDa-like 16q21CV:PGCnp
DMG:Jaffe_2016
25842ASF1ACGI-98 | CIA | HSPC146anti-silencing function 1A histone chaperone6q22.31CV:PGCnpChromatin Remodeling Genes
4217MAP3K5ASK1 | MAPKKK5 | MEKK5mitogen-activated protein kinase kinase kinase 56q22.33CV:PGCnp
DMG:Jaffe_2016
Network
Ascano FMRP targets
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
2037EPB41L24.1-G | 4.1Gerythrocyte membrane protein band 4.1-like 26q23CV:PGCnp
Network
STRUCTURAL PLASTICITY
8417STX7-syntaxin 76q23.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
54516MTRF1LHMRF1L | MRF1L | mtRF1amitochondrial translational release factor 1 like6q25-q26CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5110PCMT1PIMTprotein-L-isoaspartate (D-aspartate) O-methyltransferase6q25.1CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
340152ZC3H12DC6orf95 | MCPIP4 | TFL | dJ281H8.1 | p34zinc finger CCCH-type containing 12D6q25.1CV:PGCnp
DMG:Montano_2016
348995NUP43bA350J20.1 | p42nucleoporin 43kDa6q25.1CV:PGCnp
8871SYNJ2INPP5Hsynaptojanin 26q25.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
6581SLC22A3EMT | EMTH | OCT3solute carrier family 22 member 36q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
5340PLG-plasminogen6q26CV:PGCnp
GO_Annotation
Network
PMID:cooccur
6991TCTE3TCTEX1D3t-complex-associated-testis-expressed 36q27CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
64224HERPUD2-HERPUD family member 27p14.2CV:PGCnp
223082ZNRF2RNF202zinc and ring finger 2, E3 ubiquitin protein ligase7p14.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
10652YKT6-YKT6 v-SNARE homolog (S. cerevisiae)7p15.1CV:PGCnp
GO_Annotation
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
2645GCKFGQTL3 | GK | GLK | HHF3 | HK4 | HKIV | HXKP | LGLK | MODY2glucokinase7p15.3-p15.1CV:PGCnp
DMG:Wockner_2014
10875FGL2T49 | pT49fibrinogen like 27q11.23GO_Annotation
54677CROTCOTcarnitine O-octanoyltransferase7q21.1CV:PGCnp
55972SLC25A40MCFPsolute carrier family 25 member 407q21.12CV:PGCnp
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
6733SRPK2SFRSK2SRSF protein kinase 27q22-q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5001ORC5ORC5L | ORC5P | ORC5T | PPP1R117origin recognition complex subunit 57q22.1CV:PGCnp
80228ORAI2C7orf19 | CBCIP2 | MEM142B | TMEM142BORAI calcium release-activated calcium modulator 27q22.1CV:PGCnp
5701PSMC2MSS1 | Nbla10058 | S7proteasome 26S subunit, ATPase 27q22.1-q22.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Guipponi_2014
54556ING3Eaf4 | ING2 | MEAF4 | p47ING3inhibitor of growth family member 37q31CV:PGCnp
26136TESTESS | TESS-2testin LIM domain protein7q31.2CV:PGCnp
PMID:cooccur
84928TMEM209NET31transmembrane protein 2097q32.2CV:PGCnp
84912SLC35B4YEA | YEA4solute carrier family 35 member B47q33CV:PGCnp
PMID:cooccur
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
84255SLC37A3-solute carrier family 37 member 37q34CV:PGCnp
DMG:Wockner_2014
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
11194ABCB8EST328128 | M-ABC1 | MABC1ATP binding cassette subfamily B member 87q36CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
55112WDR60FAP163 | SRPS6 | SRTD8WD repeat domain 607q36.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
84376HOOK3HK3hook microtubule-tethering protein 38p11.21CV:PGCnp
PMID:cooccur
81790RNF170ADSA | SNAX1ring finger protein 1708p11.21CV:PGCnp
DMG:Jaffe_2016
137994LETM2-leucine zipper and EF-hand containing transmembrane protein 28p11.23CV:PGCnp
2936GSRHEL-75 | HEL-S-122mglutathione reductase8p21.1CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
1808DPYSL2CRMP-2 | CRMP2 | DHPRP2 | DRP-2 | DRP2 | N2A3 | ULIP-2 | ULIP2dihydropyrimidinase like 28p22-p21Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6386SDCBPMDA-9 | MDA9 | ST1 | SYCL | TACIP18syndecan binding protein8q12CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
Potential synaptic genes
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
28957MRPS28HSPC007 | MRP-S28 | MRP-S35 | MRPS35mitochondrial ribosomal protein S288q21.1-q21.2CV:PGCnp
DEG:Maycox_2009
55284UBE2WUBC-16 | UBC16ubiquitin conjugating enzyme E2 W (putative)8q21.11CV:PGCnp
DMG:Jaffe_2016
23643LY96ESOP-1 | MD-2 | MD2 | ly-96lymphocyte antigen 968q21.11CV:PGCnp
DMG:vanEijk_2014
157657C8orf37CORD16 | RP64 | smalltalkchromosome 8 open reading frame 378q22.1CV:PGCnp
DMG:Wockner_2014
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
54926UBE2R2CDC34B | E2-CDC34B | UBC3Bubiquitin conjugating enzyme E2 R29p13.3CV:PGCnp
4300MLLT3AF9 | YEATS3myeloid/lymphoid or mixed-lineage leukemia; translocated to, 39p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
123PLIN2ADFP | ADRPperilipin 29p22.1CV:PGCnp
PMID:cooccur
6619SNAPC3PTFbeta | SNAP50small nuclear RNA activating complex polypeptide 39p22.3CV:GWASdb
CV:PGCnp
3717JAK2JTK10 | THCYT3Janus kinase 29p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
10171RCL1RNAC | RPCL1RNA terminal phosphate cyclase-like 19p24.1-p23CV:GWASdb
CV:PGCnp
7507XPAXP1 | XPACxeroderma pigmentosum, complementation group A9q22.3CV:PGCnp
DMG:Jaffe_2016
5998RGS3C2PA | RGP3regulator of G-protein signaling 39q32CV:PGCnp
Network
PMID:cooccur
23203PMPCAAlpha-MPP | INPP5E | P-55 | SCAR2peptidase (mitochondrial processing) alpha9q34.3CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
8242KDM5CDXS1272E | JARID1C | MRX13 | MRXJ | MRXSCJ | MRXSJ | SMCX | XE169lysine demethylase 5CXp11.22-p11.21CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
Potential synaptic genes
8473OGTHINCUT-1 | HRNT1 | O-GLCNACO-linked N-acetylglucosamine (GlcNAc) transferaseXq13Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
Potential synaptic genes
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
51114ZDHHC9CGI89 | CXorf11 | DHHC9 | MMSA1 | MRXSZ | ZDHHC10 | ZNF379 | ZNF380zinc finger DHHC-type containing 9Xq26.1CV:PGCnp
PMID:cooccur
3581IL9RCD129 | IL-9Rinterleukin 9 receptorXq28 and Yq12PMID:cooccur