Gene Page: GSTT2
Summary ?
| GeneID | 2953 |
| Symbol | GSTT2 |
| Synonyms | - |
| Description | glutathione S-transferase theta 2 (gene/pseudogene) |
| Reference | MIM:600437|HGNC:HGNC:4642|Ensembl:ENSG00000099984|HPRD:02701|Vega:OTTHUMG00000150786 |
| Gene type | protein-coding |
| Map location | 22q11.23 |
| Pascal p-value | 0.115 |
| eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Frontal Cortex BA9 Hippocampus Hypothalamus Nucleus accumbens basal ganglia Putamen basal ganglia Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS | |
| PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
| GSMA_I | Genome scan meta-analysis | Psr: 0.031 | |
| Expression | Meta-analysis of gene expression | P value: 1.658 | |
| Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenias | Click to show details |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs1007888 | 22 | 24241101 | GSTT2 | ENSG00000099984.6 | 1.078E-6 | 0 | -81238 | gtex_brain_ba24 |
| rs2000468 | 22 | 24241611 | GSTT2 | ENSG00000099984.6 | 2.126E-7 | 0 | -80728 | gtex_brain_ba24 |
| rs4822450 | 22 | 24242887 | GSTT2 | ENSG00000099984.6 | 1.078E-6 | 0 | -79452 | gtex_brain_ba24 |
| rs5751760 | 22 | 24243573 | GSTT2 | ENSG00000099984.6 | 2.126E-7 | 0 | -78766 | gtex_brain_ba24 |
| rs5751761 | 22 | 24243736 | GSTT2 | ENSG00000099984.6 | 1.078E-6 | 0 | -78603 | gtex_brain_ba24 |
| rs5760095 | 22 | 24247293 | GSTT2 | ENSG00000099984.6 | 1.182E-7 | 0 | -75046 | gtex_brain_ba24 |
| rs5760097 | 22 | 24247794 | GSTT2 | ENSG00000099984.6 | 1.667E-8 | 0 | -74545 | gtex_brain_ba24 |
| rs4822451 | 22 | 24248166 | GSTT2 | ENSG00000099984.6 | 7.493E-9 | 0 | -74173 | gtex_brain_ba24 |
| rs5760098 | 22 | 24248314 | GSTT2 | ENSG00000099984.6 | 7.493E-9 | 0 | -74025 | gtex_brain_ba24 |
| rs5760099 | 22 | 24248414 | GSTT2 | ENSG00000099984.6 | 7.493E-9 | 0 | -73925 | gtex_brain_ba24 |
| rs5760102 | 22 | 24248761 | GSTT2 | ENSG00000099984.6 | 7.493E-9 | 0 | -73578 | gtex_brain_ba24 |
| rs5751764 | 22 | 24249458 | GSTT2 | ENSG00000099984.6 | 9.995E-8 | 0 | -72881 | gtex_brain_ba24 |
| rs5751765 | 22 | 24249486 | GSTT2 | ENSG00000099984.6 | 1.033E-6 | 0 | -72853 | gtex_brain_ba24 |
| rs5760104 | 22 | 24249573 | GSTT2 | ENSG00000099984.6 | 2.696E-7 | 0 | -72766 | gtex_brain_ba24 |
| rs5751766 | 22 | 24249616 | GSTT2 | ENSG00000099984.6 | 6.876E-8 | 0 | -72723 | gtex_brain_ba24 |
| rs5751767 | 22 | 24249688 | GSTT2 | ENSG00000099984.6 | 3.676E-7 | 0 | -72651 | gtex_brain_ba24 |
| rs5751768 | 22 | 24249800 | GSTT2 | ENSG00000099984.6 | 4.411E-9 | 0 | -72539 | gtex_brain_ba24 |
| rs4820572 | 22 | 24250355 | GSTT2 | ENSG00000099984.6 | 2.93E-9 | 0 | -71984 | gtex_brain_ba24 |
| rs5760106 | 22 | 24250645 | GSTT2 | ENSG00000099984.6 | 2.93E-9 | 0 | -71694 | gtex_brain_ba24 |
| rs2330634 | 22 | 24250795 | GSTT2 | ENSG00000099984.6 | 6.809E-10 | 0 | -71544 | gtex_brain_ba24 |
| rs73160491 | 22 | 24250802 | GSTT2 | ENSG00000099984.6 | 1.144E-7 | 0 | -71537 | gtex_brain_ba24 |
| rs2330635 | 22 | 24251344 | GSTT2 | ENSG00000099984.6 | 4.01E-10 | 0 | -70995 | gtex_brain_ba24 |
| rs2877178 | 22 | 24251517 | GSTT2 | ENSG00000099984.6 | 1.318E-9 | 0 | -70822 | gtex_brain_ba24 |
| rs2154593 | 22 | 24252085 | GSTT2 | ENSG00000099984.6 | 1.318E-9 | 0 | -70254 | gtex_brain_ba24 |
| rs6003948 | 22 | 24252238 | GSTT2 | ENSG00000099984.6 | 3.176E-8 | 0 | -70101 | gtex_brain_ba24 |
| rs5760107 | 22 | 24252597 | GSTT2 | ENSG00000099984.6 | 4.01E-10 | 0 | -69742 | gtex_brain_ba24 |
| rs5760108 | 22 | 24252668 | GSTT2 | ENSG00000099984.6 | 1.318E-9 | 0 | -69671 | gtex_brain_ba24 |
| rs5751770 | 22 | 24252842 | GSTT2 | ENSG00000099984.6 | 1.318E-9 | 0 | -69497 | gtex_brain_ba24 |
| rs5760109 | 22 | 24252938 | GSTT2 | ENSG00000099984.6 | 4.01E-10 | 0 | -69401 | gtex_brain_ba24 |
| rs2154594 | 22 | 24254055 | GSTT2 | ENSG00000099984.6 | 2.932E-9 | 0 | -68284 | gtex_brain_ba24 |
| rs2186366 | 22 | 24254113 | GSTT2 | ENSG00000099984.6 | 2.082E-9 | 0 | -68226 | gtex_brain_ba24 |
| rs4822452 | 22 | 24254363 | GSTT2 | ENSG00000099984.6 | 7.459E-9 | 0 | -67976 | gtex_brain_ba24 |
| rs4822453 | 22 | 24254862 | GSTT2 | ENSG00000099984.6 | 2.04E-7 | 0 | -67477 | gtex_brain_ba24 |
| rs4822454 | 22 | 24255208 | GSTT2 | ENSG00000099984.6 | 2.082E-9 | 0 | -67131 | gtex_brain_ba24 |
| rs4822455 | 22 | 24255296 | GSTT2 | ENSG00000099984.6 | 1.791E-9 | 0 | -67043 | gtex_brain_ba24 |
| rs5844574 | 22 | 24256102 | GSTT2 | ENSG00000099984.6 | 3.197E-8 | 0 | -66237 | gtex_brain_ba24 |
| rs398036636 | 22 | 24256692 | GSTT2 | ENSG00000099984.6 | 1.791E-9 | 0 | -65647 | gtex_brain_ba24 |
| rs1002286 | 22 | 24257337 | GSTT2 | ENSG00000099984.6 | 2.757E-8 | 0 | -65002 | gtex_brain_ba24 |
| rs5751771 | 22 | 24258777 | GSTT2 | ENSG00000099984.6 | 4.236E-9 | 0 | -63562 | gtex_brain_ba24 |
| rs5760112 | 22 | 24259772 | GSTT2 | ENSG00000099984.6 | 2.062E-8 | 0 | -62567 | gtex_brain_ba24 |
| rs1892713 | 22 | 24260463 | GSTT2 | ENSG00000099984.6 | 4.119E-8 | 0 | -61876 | gtex_brain_ba24 |
| rs4822457 | 22 | 24263474 | GSTT2 | ENSG00000099984.6 | 2.571E-8 | 0 | -58865 | gtex_brain_ba24 |
| rs4822458 | 22 | 24265659 | GSTT2 | ENSG00000099984.6 | 1.318E-8 | 0 | -56680 | gtex_brain_ba24 |
| rs5751775 | 22 | 24266726 | GSTT2 | ENSG00000099984.6 | 5.236E-10 | 0 | -55613 | gtex_brain_ba24 |
| rs5760119 | 22 | 24266831 | GSTT2 | ENSG00000099984.6 | 5.316E-10 | 0 | -55508 | gtex_brain_ba24 |
| rs5760120 | 22 | 24266867 | GSTT2 | ENSG00000099984.6 | 5.352E-10 | 0 | -55472 | gtex_brain_ba24 |
| rs5751776 | 22 | 24266954 | GSTT2 | ENSG00000099984.6 | 4.982E-10 | 0 | -55385 | gtex_brain_ba24 |
| rs5751777 | 22 | 24267047 | GSTT2 | ENSG00000099984.6 | 1.018E-9 | 0 | -55292 | gtex_brain_ba24 |
| rs34819965 | 22 | 24267078 | GSTT2 | ENSG00000099984.6 | 1.544E-8 | 0 | -55261 | gtex_brain_ba24 |
| rs4822460 | 22 | 24267995 | GSTT2 | ENSG00000099984.6 | 2.113E-6 | 0 | -54344 | gtex_brain_ba24 |
| rs9612520 | 22 | 24269459 | GSTT2 | ENSG00000099984.6 | 1.491E-8 | 0 | -52880 | gtex_brain_ba24 |
| rs5760124 | 22 | 24272122 | GSTT2 | ENSG00000099984.6 | 1.511E-8 | 0 | -50217 | gtex_brain_ba24 |
| rs397754387 | 22 | 24273325 | GSTT2 | ENSG00000099984.6 | 1.513E-8 | 0 | -49014 | gtex_brain_ba24 |
| rs139038251 | 22 | 24291927 | GSTT2 | ENSG00000099984.6 | 9.19E-8 | 0 | -30412 | gtex_brain_ba24 |
| rs1985951 | 22 | 24292488 | GSTT2 | ENSG00000099984.6 | 8.797E-8 | 0 | -29851 | gtex_brain_ba24 |
| rs2844003 | 22 | 24292957 | GSTT2 | ENSG00000099984.6 | 5.037E-8 | 0 | -29382 | gtex_brain_ba24 |
| rs140264 | 22 | 24293976 | GSTT2 | ENSG00000099984.6 | 4.101E-8 | 0 | -28363 | gtex_brain_ba24 |
| rs2330649 | 22 | 24295053 | GSTT2 | ENSG00000099984.6 | 9.307E-8 | 0 | -27286 | gtex_brain_ba24 |
| rs575146 | 22 | 24295074 | GSTT2 | ENSG00000099984.6 | 5.118E-7 | 0 | -27265 | gtex_brain_ba24 |
| rs575220 | 22 | 24295103 | GSTT2 | ENSG00000099984.6 | 9.634E-9 | 0 | -27236 | gtex_brain_ba24 |
| rs2858907 | 22 | 24295217 | GSTT2 | ENSG00000099984.6 | 4.902E-8 | 0 | -27122 | gtex_brain_ba24 |
| rs2739330 | 22 | 24295286 | GSTT2 | ENSG00000099984.6 | 3.604E-8 | 0 | -27053 | gtex_brain_ba24 |
| rs2739334 | 22 | 24295427 | GSTT2 | ENSG00000099984.6 | 2.234E-7 | 0 | -26912 | gtex_brain_ba24 |
| rs2739335 | 22 | 24295805 | GSTT2 | ENSG00000099984.6 | 1.212E-7 | 0 | -26534 | gtex_brain_ba24 |
| rs140244 | 22 | 24296056 | GSTT2 | ENSG00000099984.6 | 4.561E-7 | 0 | -26283 | gtex_brain_ba24 |
| rs12483950 | 22 | 24296175 | GSTT2 | ENSG00000099984.6 | 6.718E-8 | 0 | -26164 | gtex_brain_ba24 |
| rs2739337 | 22 | 24296483 | GSTT2 | ENSG00000099984.6 | 7.62E-7 | 0 | -25856 | gtex_brain_ba24 |
| rs2097433 | 22 | 24296894 | GSTT2 | ENSG00000099984.6 | 2.724E-7 | 0 | -25445 | gtex_brain_ba24 |
| rs2739338 | 22 | 24297130 | GSTT2 | ENSG00000099984.6 | 4.614E-7 | 0 | -25209 | gtex_brain_ba24 |
| rs2253552 | 22 | 24297287 | GSTT2 | ENSG00000099984.6 | 4.425E-8 | 0 | -25052 | gtex_brain_ba24 |
| rs2154601 | 22 | 24297866 | GSTT2 | ENSG00000099984.6 | 7.2E-7 | 0 | -24473 | gtex_brain_ba24 |
| rs2739343 | 22 | 24298180 | GSTT2 | ENSG00000099984.6 | 2.72E-7 | 0 | -24159 | gtex_brain_ba24 |
| rs2858913 | 22 | 24298182 | GSTT2 | ENSG00000099984.6 | 2.717E-7 | 0 | -24157 | gtex_brain_ba24 |
| rs2739344 | 22 | 24298293 | GSTT2 | ENSG00000099984.6 | 4.2E-7 | 0 | -24046 | gtex_brain_ba24 |
| rs2858914 | 22 | 24298325 | GSTT2 | ENSG00000099984.6 | 4.045E-7 | 0 | -24014 | gtex_brain_ba24 |
| rs5760130 | 22 | 24299072 | GSTT2 | ENSG00000099984.6 | 2.393E-8 | 0 | -23267 | gtex_brain_ba24 |
| rs5742303 | 22 | 24299147 | GSTT2 | ENSG00000099984.6 | 2.716E-7 | 0 | -23192 | gtex_brain_ba24 |
| rs141411932 | 22 | 24302194 | GSTT2 | ENSG00000099984.6 | 1.902E-6 | 0 | -20145 | gtex_brain_ba24 |
| rs4822466 | 22 | 24312204 | GSTT2 | ENSG00000099984.6 | 2.507E-8 | 0 | -10135 | gtex_brain_ba24 |
| rs144834638 | 22 | 24334675 | GSTT2 | ENSG00000099984.6 | 6.881E-7 | 0 | 12336 | gtex_brain_ba24 |
| rs148520590 | 22 | 24334679 | GSTT2 | ENSG00000099984.6 | 8.448E-7 | 0 | 12340 | gtex_brain_ba24 |
| rs2739332 | 22 | 24335506 | GSTT2 | ENSG00000099984.6 | 1.499E-6 | 0 | 13167 | gtex_brain_ba24 |
| rs140288 | 22 | 24335977 | GSTT2 | ENSG00000099984.6 | 1.485E-6 | 0 | 13638 | gtex_brain_ba24 |
| rs2844004 | 22 | 24336531 | GSTT2 | ENSG00000099984.6 | 1.482E-6 | 0 | 14192 | gtex_brain_ba24 |
| rs55784417 | 22 | 24342791 | GSTT2 | ENSG00000099984.6 | 2.374E-9 | 0 | 20452 | gtex_brain_ba24 |
| rs9608229 | 22 | 24399364 | GSTT2 | ENSG00000099984.6 | 3.263E-7 | 0 | 77025 | gtex_brain_ba24 |
| rs1007888 | 22 | 24241101 | GSTT2 | ENSG00000099984.6 | 4.512E-11 | 0 | -81238 | gtex_brain_putamen_basal |
| rs2000468 | 22 | 24241611 | GSTT2 | ENSG00000099984.6 | 7.229E-12 | 0 | -80728 | gtex_brain_putamen_basal |
| rs4822450 | 22 | 24242887 | GSTT2 | ENSG00000099984.6 | 4.512E-11 | 0 | -79452 | gtex_brain_putamen_basal |
| rs5751760 | 22 | 24243573 | GSTT2 | ENSG00000099984.6 | 7.229E-12 | 0 | -78766 | gtex_brain_putamen_basal |
| rs5751761 | 22 | 24243736 | GSTT2 | ENSG00000099984.6 | 4.512E-11 | 0 | -78603 | gtex_brain_putamen_basal |
| rs2000469 | 22 | 24245292 | GSTT2 | ENSG00000099984.6 | 8.159E-7 | 0 | -77047 | gtex_brain_putamen_basal |
| rs5760095 | 22 | 24247293 | GSTT2 | ENSG00000099984.6 | 1.417E-11 | 0 | -75046 | gtex_brain_putamen_basal |
| rs5760096 | 22 | 24247310 | GSTT2 | ENSG00000099984.6 | 1.055E-6 | 0 | -75029 | gtex_brain_putamen_basal |
| rs5760097 | 22 | 24247794 | GSTT2 | ENSG00000099984.6 | 2.775E-11 | 0 | -74545 | gtex_brain_putamen_basal |
| rs4822451 | 22 | 24248166 | GSTT2 | ENSG00000099984.6 | 1.697E-11 | 0 | -74173 | gtex_brain_putamen_basal |
| rs5760098 | 22 | 24248314 | GSTT2 | ENSG00000099984.6 | 1.697E-11 | 0 | -74025 | gtex_brain_putamen_basal |
| rs5760099 | 22 | 24248414 | GSTT2 | ENSG00000099984.6 | 1.697E-11 | 0 | -73925 | gtex_brain_putamen_basal |
| rs5760101 | 22 | 24248712 | GSTT2 | ENSG00000099984.6 | 2.324E-7 | 0 | -73627 | gtex_brain_putamen_basal |
| rs5760102 | 22 | 24248761 | GSTT2 | ENSG00000099984.6 | 1.697E-11 | 0 | -73578 | gtex_brain_putamen_basal |
| rs5751764 | 22 | 24249458 | GSTT2 | ENSG00000099984.6 | 2.698E-11 | 0 | -72881 | gtex_brain_putamen_basal |
| rs5751765 | 22 | 24249486 | GSTT2 | ENSG00000099984.6 | 5.309E-7 | 0 | -72853 | gtex_brain_putamen_basal |
| rs5760104 | 22 | 24249573 | GSTT2 | ENSG00000099984.6 | 2.92E-11 | 0 | -72766 | gtex_brain_putamen_basal |
| rs5751766 | 22 | 24249616 | GSTT2 | ENSG00000099984.6 | 1.718E-13 | 0 | -72723 | gtex_brain_putamen_basal |
| rs5751767 | 22 | 24249688 | GSTT2 | ENSG00000099984.6 | 1.466E-8 | 0 | -72651 | gtex_brain_putamen_basal |
| rs5751768 | 22 | 24249800 | GSTT2 | ENSG00000099984.6 | 1.835E-10 | 0 | -72539 | gtex_brain_putamen_basal |
| rs4820572 | 22 | 24250355 | GSTT2 | ENSG00000099984.6 | 3.2E-10 | 0 | -71984 | gtex_brain_putamen_basal |
| rs5760106 | 22 | 24250645 | GSTT2 | ENSG00000099984.6 | 4.071E-10 | 0 | -71694 | gtex_brain_putamen_basal |
| rs2330634 | 22 | 24250795 | GSTT2 | ENSG00000099984.6 | 2.644E-14 | 0 | -71544 | gtex_brain_putamen_basal |
| rs73160491 | 22 | 24250802 | GSTT2 | ENSG00000099984.6 | 1.609E-7 | 0 | -71537 | gtex_brain_putamen_basal |
| rs2330635 | 22 | 24251344 | GSTT2 | ENSG00000099984.6 | 5.503E-11 | 0 | -70995 | gtex_brain_putamen_basal |
| rs2877178 | 22 | 24251517 | GSTT2 | ENSG00000099984.6 | 2.676E-12 | 0 | -70822 | gtex_brain_putamen_basal |
| rs2154593 | 22 | 24252085 | GSTT2 | ENSG00000099984.6 | 2.676E-12 | 0 | -70254 | gtex_brain_putamen_basal |
| rs6003948 | 22 | 24252238 | GSTT2 | ENSG00000099984.6 | 1.383E-7 | 0 | -70101 | gtex_brain_putamen_basal |
| rs5760107 | 22 | 24252597 | GSTT2 | ENSG00000099984.6 | 5.503E-11 | 0 | -69742 | gtex_brain_putamen_basal |
| rs5760108 | 22 | 24252668 | GSTT2 | ENSG00000099984.6 | 2.676E-12 | 0 | -69671 | gtex_brain_putamen_basal |
| rs5751770 | 22 | 24252842 | GSTT2 | ENSG00000099984.6 | 2.676E-12 | 0 | -69497 | gtex_brain_putamen_basal |
| rs5760109 | 22 | 24252938 | GSTT2 | ENSG00000099984.6 | 5.503E-11 | 0 | -69401 | gtex_brain_putamen_basal |
| rs2154594 | 22 | 24254055 | GSTT2 | ENSG00000099984.6 | 5.62E-11 | 0 | -68284 | gtex_brain_putamen_basal |
| rs2186366 | 22 | 24254113 | GSTT2 | ENSG00000099984.6 | 5.503E-11 | 0 | -68226 | gtex_brain_putamen_basal |
| rs4822452 | 22 | 24254363 | GSTT2 | ENSG00000099984.6 | 3.823E-11 | 0 | -67976 | gtex_brain_putamen_basal |
| rs4822453 | 22 | 24254862 | GSTT2 | ENSG00000099984.6 | 3.557E-10 | 0 | -67477 | gtex_brain_putamen_basal |
| rs4822454 | 22 | 24255208 | GSTT2 | ENSG00000099984.6 | 5.503E-11 | 0 | -67131 | gtex_brain_putamen_basal |
| rs4822455 | 22 | 24255296 | GSTT2 | ENSG00000099984.6 | 1.532E-14 | 0 | -67043 | gtex_brain_putamen_basal |
| rs5844574 | 22 | 24256102 | GSTT2 | ENSG00000099984.6 | 6.951E-13 | 0 | -66237 | gtex_brain_putamen_basal |
| rs398036636 | 22 | 24256692 | GSTT2 | ENSG00000099984.6 | 2.854E-15 | 0 | -65647 | gtex_brain_putamen_basal |
| rs1002286 | 22 | 24257337 | GSTT2 | ENSG00000099984.6 | 5.209E-13 | 0 | -65002 | gtex_brain_putamen_basal |
| rs5751771 | 22 | 24258777 | GSTT2 | ENSG00000099984.6 | 1.623E-14 | 0 | -63562 | gtex_brain_putamen_basal |
| rs68127285 | 22 | 24258983 | GSTT2 | ENSG00000099984.6 | 2.058E-7 | 0 | -63356 | gtex_brain_putamen_basal |
| rs5760112 | 22 | 24259772 | GSTT2 | ENSG00000099984.6 | 5.209E-13 | 0 | -62567 | gtex_brain_putamen_basal |
| rs1892713 | 22 | 24260463 | GSTT2 | ENSG00000099984.6 | 1.25E-11 | 0 | -61876 | gtex_brain_putamen_basal |
| rs915590 | 22 | 24261143 | GSTT2 | ENSG00000099984.6 | 2.074E-7 | 0 | -61196 | gtex_brain_putamen_basal |
| rs5760114 | 22 | 24261747 | GSTT2 | ENSG00000099984.6 | 4.377E-8 | 0 | -60592 | gtex_brain_putamen_basal |
| rs5751773 | 22 | 24262044 | GSTT2 | ENSG00000099984.6 | 3.813E-8 | 0 | -60295 | gtex_brain_putamen_basal |
| rs4822457 | 22 | 24263474 | GSTT2 | ENSG00000099984.6 | 6.171E-13 | 0 | -58865 | gtex_brain_putamen_basal |
| rs5760116 | 22 | 24263502 | GSTT2 | ENSG00000099984.6 | 1.203E-6 | 0 | -58837 | gtex_brain_putamen_basal |
| rs4822458 | 22 | 24265659 | GSTT2 | ENSG00000099984.6 | 4.827E-13 | 0 | -56680 | gtex_brain_putamen_basal |
| rs5751775 | 22 | 24266726 | GSTT2 | ENSG00000099984.6 | 1.675E-14 | 0 | -55613 | gtex_brain_putamen_basal |
| rs5760119 | 22 | 24266831 | GSTT2 | ENSG00000099984.6 | 1.303E-15 | 0 | -55508 | gtex_brain_putamen_basal |
| rs5760120 | 22 | 24266867 | GSTT2 | ENSG00000099984.6 | 1.261E-15 | 0 | -55472 | gtex_brain_putamen_basal |
| rs5751776 | 22 | 24266954 | GSTT2 | ENSG00000099984.6 | 1.06E-15 | 0 | -55385 | gtex_brain_putamen_basal |
| rs5751777 | 22 | 24267047 | GSTT2 | ENSG00000099984.6 | 3.456E-15 | 0 | -55292 | gtex_brain_putamen_basal |
| rs34819965 | 22 | 24267078 | GSTT2 | ENSG00000099984.6 | 2.362E-12 | 0 | -55261 | gtex_brain_putamen_basal |
| rs5760121 | 22 | 24267347 | GSTT2 | ENSG00000099984.6 | 1.198E-10 | 0 | -54992 | gtex_brain_putamen_basal |
| rs5760122 | 22 | 24267538 | GSTT2 | ENSG00000099984.6 | 1.319E-10 | 0 | -54801 | gtex_brain_putamen_basal |
| rs4822459 | 22 | 24267815 | GSTT2 | ENSG00000099984.6 | 1.531E-10 | 0 | -54524 | gtex_brain_putamen_basal |
| rs4822460 | 22 | 24267995 | GSTT2 | ENSG00000099984.6 | 2.003E-10 | 0 | -54344 | gtex_brain_putamen_basal |
| rs4822461 | 22 | 24268120 | GSTT2 | ENSG00000099984.6 | 6.99E-10 | 0 | -54219 | gtex_brain_putamen_basal |
| rs2154596 | 22 | 24268670 | GSTT2 | ENSG00000099984.6 | 1.319E-10 | 0 | -53669 | gtex_brain_putamen_basal |
| rs2154597 | 22 | 24268762 | GSTT2 | ENSG00000099984.6 | 1.319E-10 | 0 | -53577 | gtex_brain_putamen_basal |
| rs6003962 | 22 | 24268857 | GSTT2 | ENSG00000099984.6 | 1.319E-10 | 0 | -53482 | gtex_brain_putamen_basal |
| rs6003963 | 22 | 24268998 | GSTT2 | ENSG00000099984.6 | 1.319E-10 | 0 | -53341 | gtex_brain_putamen_basal |
| rs6003964 | 22 | 24269084 | GSTT2 | ENSG00000099984.6 | 6.99E-10 | 0 | -53255 | gtex_brain_putamen_basal |
| rs6003965 | 22 | 24269096 | GSTT2 | ENSG00000099984.6 | 1.319E-10 | 0 | -53243 | gtex_brain_putamen_basal |
| rs1892714 | 22 | 24269358 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -52981 | gtex_brain_putamen_basal |
| rs1892715 | 22 | 24269430 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -52909 | gtex_brain_putamen_basal |
| rs9612520 | 22 | 24269459 | GSTT2 | ENSG00000099984.6 | 1.269E-13 | 0 | -52880 | gtex_brain_putamen_basal |
| rs1892716 | 22 | 24269519 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -52820 | gtex_brain_putamen_basal |
| rs6003966 | 22 | 24269624 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -52715 | gtex_brain_putamen_basal |
| rs2330637 | 22 | 24269789 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -52550 | gtex_brain_putamen_basal |
| rs2330638 | 22 | 24270033 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -52306 | gtex_brain_putamen_basal |
| rs6003968 | 22 | 24270108 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -52231 | gtex_brain_putamen_basal |
| rs5996632 | 22 | 24270117 | GSTT2 | ENSG00000099984.6 | 1.053E-9 | 0 | -52222 | gtex_brain_putamen_basal |
| rs5760123 | 22 | 24270129 | GSTT2 | ENSG00000099984.6 | 2.383E-9 | 0 | -52210 | gtex_brain_putamen_basal |
| rs5996633 | 22 | 24270585 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -51754 | gtex_brain_putamen_basal |
| rs5996634 | 22 | 24270732 | GSTT2 | ENSG00000099984.6 | 2.432E-10 | 0 | -51607 | gtex_brain_putamen_basal |
| rs6003970 | 22 | 24270733 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -51606 | gtex_brain_putamen_basal |
| rs5996635 | 22 | 24270777 | GSTT2 | ENSG00000099984.6 | 3.027E-10 | 0 | -51562 | gtex_brain_putamen_basal |
| rs2330639 | 22 | 24271291 | GSTT2 | ENSG00000099984.6 | 2.398E-9 | 0 | -51048 | gtex_brain_putamen_basal |
| rs2330640 | 22 | 24271297 | GSTT2 | ENSG00000099984.6 | 3.048E-10 | 0 | -51042 | gtex_brain_putamen_basal |
| rs2330641 | 22 | 24271299 | GSTT2 | ENSG00000099984.6 | 3.048E-10 | 0 | -51040 | gtex_brain_putamen_basal |
| rs5760124 | 22 | 24272122 | GSTT2 | ENSG00000099984.6 | 1.27E-13 | 0 | -50217 | gtex_brain_putamen_basal |
| rs397754387 | 22 | 24273325 | GSTT2 | ENSG00000099984.6 | 1.267E-13 | 0 | -49014 | gtex_brain_putamen_basal |
| rs139038251 | 22 | 24291927 | GSTT2 | ENSG00000099984.6 | 1.444E-11 | 0 | -30412 | gtex_brain_putamen_basal |
| rs113413 | 22 | 24292264 | GSTT2 | ENSG00000099984.6 | 1.028E-8 | 0 | -30075 | gtex_brain_putamen_basal |
| rs1985951 | 22 | 24292488 | GSTT2 | ENSG00000099984.6 | 2.703E-13 | 0 | -29851 | gtex_brain_putamen_basal |
| rs2844003 | 22 | 24292957 | GSTT2 | ENSG00000099984.6 | 1.698E-14 | 0 | -29382 | gtex_brain_putamen_basal |
| rs1970980 | 22 | 24293656 | GSTT2 | ENSG00000099984.6 | 2.424E-9 | 0 | -28683 | gtex_brain_putamen_basal |
| rs140264 | 22 | 24293976 | GSTT2 | ENSG00000099984.6 | 1.968E-14 | 0 | -28363 | gtex_brain_putamen_basal |
| rs2018350 | 22 | 24294979 | GSTT2 | ENSG00000099984.6 | 1.214E-6 | 0 | -27360 | gtex_brain_putamen_basal |
| rs2330649 | 22 | 24295053 | GSTT2 | ENSG00000099984.6 | 1.118E-13 | 0 | -27286 | gtex_brain_putamen_basal |
| rs575146 | 22 | 24295074 | GSTT2 | ENSG00000099984.6 | 1.937E-12 | 0 | -27265 | gtex_brain_putamen_basal |
| rs575220 | 22 | 24295103 | GSTT2 | ENSG00000099984.6 | 3.819E-14 | 0 | -27236 | gtex_brain_putamen_basal |
| rs1985948 | 22 | 24295138 | GSTT2 | ENSG00000099984.6 | 1.861E-6 | 0 | -27201 | gtex_brain_putamen_basal |
| rs2858907 | 22 | 24295217 | GSTT2 | ENSG00000099984.6 | 1.458E-15 | 0 | -27122 | gtex_brain_putamen_basal |
| rs2739330 | 22 | 24295286 | GSTT2 | ENSG00000099984.6 | 1.444E-15 | 0 | -27053 | gtex_brain_putamen_basal |
| rs6003988 | 22 | 24295388 | GSTT2 | ENSG00000099984.6 | 3.055E-11 | 0 | -26951 | gtex_brain_putamen_basal |
| rs2739334 | 22 | 24295427 | GSTT2 | ENSG00000099984.6 | 8.694E-15 | 0 | -26912 | gtex_brain_putamen_basal |
| rs6003989 | 22 | 24295496 | GSTT2 | ENSG00000099984.6 | 7.862E-9 | 0 | -26843 | gtex_brain_putamen_basal |
| rs2739335 | 22 | 24295805 | GSTT2 | ENSG00000099984.6 | 3.387E-15 | 0 | -26534 | gtex_brain_putamen_basal |
| rs6003991 | 22 | 24295813 | GSTT2 | ENSG00000099984.6 | 2.97E-9 | 0 | -26526 | gtex_brain_putamen_basal |
| rs140244 | 22 | 24296056 | GSTT2 | ENSG00000099984.6 | 2.38E-14 | 0 | -26283 | gtex_brain_putamen_basal |
| rs12483950 | 22 | 24296175 | GSTT2 | ENSG00000099984.6 | 1.498E-13 | 0 | -26164 | gtex_brain_putamen_basal |
| rs12484324 | 22 | 24296294 | GSTT2 | ENSG00000099984.6 | 4.506E-10 | 0 | -26045 | gtex_brain_putamen_basal |
| rs12483869 | 22 | 24296302 | GSTT2 | ENSG00000099984.6 | 1.063E-9 | 0 | -26037 | gtex_brain_putamen_basal |
| rs2739337 | 22 | 24296483 | GSTT2 | ENSG00000099984.6 | 5.876E-14 | 0 | -25856 | gtex_brain_putamen_basal |
| rs2097433 | 22 | 24296894 | GSTT2 | ENSG00000099984.6 | 1.296E-14 | 0 | -25445 | gtex_brain_putamen_basal |
| rs2739338 | 22 | 24297130 | GSTT2 | ENSG00000099984.6 | 4.813E-14 | 0 | -25209 | gtex_brain_putamen_basal |
| rs2253552 | 22 | 24297287 | GSTT2 | ENSG00000099984.6 | 2.324E-15 | 0 | -25052 | gtex_brain_putamen_basal |
| rs2154601 | 22 | 24297866 | GSTT2 | ENSG00000099984.6 | 2.258E-12 | 0 | -24473 | gtex_brain_putamen_basal |
| rs2739343 | 22 | 24298180 | GSTT2 | ENSG00000099984.6 | 4.46E-14 | 0 | -24159 | gtex_brain_putamen_basal |
| rs2858913 | 22 | 24298182 | GSTT2 | ENSG00000099984.6 | 4.447E-14 | 0 | -24157 | gtex_brain_putamen_basal |
| rs2739344 | 22 | 24298293 | GSTT2 | ENSG00000099984.6 | 4.537E-14 | 0 | -24046 | gtex_brain_putamen_basal |
| rs2858914 | 22 | 24298325 | GSTT2 | ENSG00000099984.6 | 4.254E-14 | 0 | -24014 | gtex_brain_putamen_basal |
| rs5760130 | 22 | 24299072 | GSTT2 | ENSG00000099984.6 | 3.905E-15 | 0 | -23267 | gtex_brain_putamen_basal |
| rs5742303 | 22 | 24299147 | GSTT2 | ENSG00000099984.6 | 6.053E-14 | 0 | -23192 | gtex_brain_putamen_basal |
| rs140193 | 22 | 24300683 | GSTT2 | ENSG00000099984.6 | 5.436E-8 | 0 | -21656 | gtex_brain_putamen_basal |
| rs201920824 | 22 | 24300701 | GSTT2 | ENSG00000099984.6 | 1.712E-7 | 0 | -21638 | gtex_brain_putamen_basal |
| rs141411932 | 22 | 24302194 | GSTT2 | ENSG00000099984.6 | 4.366E-10 | 0 | -20145 | gtex_brain_putamen_basal |
| rs4822466 | 22 | 24312204 | GSTT2 | ENSG00000099984.6 | 8.548E-15 | 0 | -10135 | gtex_brain_putamen_basal |
| rs1006771 | 22 | 24314006 | GSTT2 | ENSG00000099984.6 | 4.826E-7 | 0 | -8333 | gtex_brain_putamen_basal |
| rs139012979 | 22 | 24323514 | GSTT2 | ENSG00000099984.6 | 3.005E-7 | 0 | 1175 | gtex_brain_putamen_basal |
| rs140188 | 22 | 24324052 | GSTT2 | ENSG00000099984.6 | 6.005E-10 | 0 | 1713 | gtex_brain_putamen_basal |
| rs140220 | 22 | 24328021 | GSTT2 | ENSG00000099984.6 | 1.994E-7 | 0 | 5682 | gtex_brain_putamen_basal |
| rs140221 | 22 | 24328163 | GSTT2 | ENSG00000099984.6 | 1.258E-8 | 0 | 5824 | gtex_brain_putamen_basal |
| rs140240 | 22 | 24329435 | GSTT2 | ENSG00000099984.6 | 7.871E-7 | 0 | 7096 | gtex_brain_putamen_basal |
| rs2739329 | 22 | 24334209 | GSTT2 | ENSG00000099984.6 | 2.731E-8 | 0 | 11870 | gtex_brain_putamen_basal |
| rs144834638 | 22 | 24334675 | GSTT2 | ENSG00000099984.6 | 8.33E-9 | 0 | 12336 | gtex_brain_putamen_basal |
| rs148520590 | 22 | 24334679 | GSTT2 | ENSG00000099984.6 | 1.065E-7 | 0 | 12340 | gtex_brain_putamen_basal |
| rs2739332 | 22 | 24335506 | GSTT2 | ENSG00000099984.6 | 2.447E-9 | 0 | 13167 | gtex_brain_putamen_basal |
| rs2739333 | 22 | 24335586 | GSTT2 | ENSG00000099984.6 | 1.661E-8 | 0 | 13247 | gtex_brain_putamen_basal |
| rs140288 | 22 | 24335977 | GSTT2 | ENSG00000099984.6 | 2.415E-9 | 0 | 13638 | gtex_brain_putamen_basal |
| rs2844004 | 22 | 24336531 | GSTT2 | ENSG00000099984.6 | 2.394E-9 | 0 | 14192 | gtex_brain_putamen_basal |
| rs2262477 | 22 | 24338936 | GSTT2 | ENSG00000099984.6 | 1.469E-8 | 0 | 16597 | gtex_brain_putamen_basal |
| rs140291 | 22 | 24341250 | GSTT2 | ENSG00000099984.6 | 4.684E-7 | 0 | 18911 | gtex_brain_putamen_basal |
| rs55784417 | 22 | 24342791 | GSTT2 | ENSG00000099984.6 | 6.435E-10 | 0 | 20452 | gtex_brain_putamen_basal |
| rs140307 | 22 | 24353656 | GSTT2 | ENSG00000099984.6 | 8.915E-9 | 0 | 31317 | gtex_brain_putamen_basal |
| rs2844006 | 22 | 24355870 | GSTT2 | ENSG00000099984.6 | 9.945E-7 | 0 | 33531 | gtex_brain_putamen_basal |
| rs2858898 | 22 | 24365238 | GSTT2 | ENSG00000099984.6 | 1.395E-6 | 0 | 42899 | gtex_brain_putamen_basal |
| rs2844007 | 22 | 24375019 | GSTT2 | ENSG00000099984.6 | 1.649E-6 | 0 | 52680 | gtex_brain_putamen_basal |
| rs2739346 | 22 | 24375993 | GSTT2 | ENSG00000099984.6 | 9.87E-7 | 0 | 53654 | gtex_brain_putamen_basal |
| rs140308 | 22 | 24377034 | GSTT2 | ENSG00000099984.6 | 9.651E-7 | 0 | 54695 | gtex_brain_putamen_basal |
| rs140309 | 22 | 24381083 | GSTT2 | ENSG00000099984.6 | 2.226E-6 | 0 | 58744 | gtex_brain_putamen_basal |
| rs140310 | 22 | 24381406 | GSTT2 | ENSG00000099984.6 | 1.977E-6 | 0 | 59067 | gtex_brain_putamen_basal |
| rs373087457 | 22 | 24385783 | GSTT2 | ENSG00000099984.6 | 4.616E-7 | 0 | 63444 | gtex_brain_putamen_basal |
| rs34077507 | 22 | 24386001 | GSTT2 | ENSG00000099984.6 | 1.871E-6 | 0 | 63662 | gtex_brain_putamen_basal |
| rs2844010 | 22 | 24387197 | GSTT2 | ENSG00000099984.6 | 7.736E-7 | 0 | 64858 | gtex_brain_putamen_basal |
| rs140316 | 22 | 24388274 | GSTT2 | ENSG00000099984.6 | 2.205E-6 | 0 | 65935 | gtex_brain_putamen_basal |
| rs140317 | 22 | 24388642 | GSTT2 | ENSG00000099984.6 | 1.354E-6 | 0 | 66303 | gtex_brain_putamen_basal |
| rs140318 | 22 | 24389199 | GSTT2 | ENSG00000099984.6 | 2.617E-6 | 0 | 66860 | gtex_brain_putamen_basal |
| rs9608229 | 22 | 24399364 | GSTT2 | ENSG00000099984.6 | 8.97E-8 | 0 | 77025 | gtex_brain_putamen_basal |
| rs5760175 | 22 | 24399655 | GSTT2 | ENSG00000099984.6 | 6.266E-8 | 0 | 77316 | gtex_brain_putamen_basal |
| rs5751792 | 22 | 24401542 | GSTT2 | ENSG00000099984.6 | 9.376E-8 | 0 | 79203 | gtex_brain_putamen_basal |
| rs5760176 | 22 | 24402321 | GSTT2 | ENSG00000099984.6 | 1.11E-7 | 0 | 79982 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section III. Gene Ontology annotation
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|---|---|---|---|
| GO:0004364 | glutathione transferase activity | TAS | 7789971 | |
| GO:0016740 | transferase activity | IEA | - | |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0005634 | nucleus | IDA | 18029348 | |
| GO:0005737 | cytoplasm | IEA | - |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| KEGG GLUTATHIONE METABOLISM | 50 | 34 | All SZGR 2.0 genes in this pathway |
| KEGG METABOLISM OF XENOBIOTICS BY CYTOCHROME P450 | 70 | 44 | All SZGR 2.0 genes in this pathway |
| KEGG DRUG METABOLISM CYTOCHROME P450 | 72 | 47 | All SZGR 2.0 genes in this pathway |
| PARENT MTOR SIGNALING UP | 567 | 375 | All SZGR 2.0 genes in this pathway |
| PEREZ TP53 TARGETS | 1174 | 695 | All SZGR 2.0 genes in this pathway |
| DACOSTA UV RESPONSE VIA ERCC3 XPCS UP | 28 | 16 | All SZGR 2.0 genes in this pathway |
| WILLIAMS ESR2 TARGETS UP | 28 | 18 | All SZGR 2.0 genes in this pathway |
| BUYTAERT PHOTODYNAMIC THERAPY STRESS DN | 637 | 377 | All SZGR 2.0 genes in this pathway |
| BENPORATH NANOG TARGETS | 988 | 594 | All SZGR 2.0 genes in this pathway |
| MORI PRE BI LYMPHOCYTE UP | 80 | 54 | All SZGR 2.0 genes in this pathway |
| WELCH GATA1 TARGETS | 22 | 12 | All SZGR 2.0 genes in this pathway |
| BYSTRYKH HEMATOPOIESIS STEM CELL QTL TRANS | 882 | 572 | All SZGR 2.0 genes in this pathway |
| BLALOCK ALZHEIMERS DISEASE UP | 1691 | 1088 | All SZGR 2.0 genes in this pathway |
| CUI TCF21 TARGETS 2 UP | 428 | 266 | All SZGR 2.0 genes in this pathway |
| CARDOSO RESPONSE TO GAMMA RADIATION AND 3AB | 18 | 11 | All SZGR 2.0 genes in this pathway |
| GAVIN FOXP3 TARGETS CLUSTER P2 | 79 | 55 | All SZGR 2.0 genes in this pathway |
| MARSON BOUND BY FOXP3 STIMULATED | 1022 | 619 | All SZGR 2.0 genes in this pathway |
| SMID BREAST CANCER RELAPSE IN BONE UP | 97 | 61 | All SZGR 2.0 genes in this pathway |
| SMID BREAST CANCER BASAL DN | 701 | 446 | All SZGR 2.0 genes in this pathway |
| YOSHIMURA MAPK8 TARGETS UP | 1305 | 895 | All SZGR 2.0 genes in this pathway |
| MELLMAN TUT1 TARGETS DN | 47 | 29 | All SZGR 2.0 genes in this pathway |
| MARSON FOXP3 TARGETS DN | 54 | 38 | All SZGR 2.0 genes in this pathway |
| SAKAI CHRONIC HEPATITIS VS LIVER CANCER UP | 83 | 63 | All SZGR 2.0 genes in this pathway |
| CAIRO HEPATOBLASTOMA DN | 267 | 160 | All SZGR 2.0 genes in this pathway |
| CAIRO LIVER DEVELOPMENT DN | 222 | 141 | All SZGR 2.0 genes in this pathway |
| MIKKELSEN MEF HCP WITH H3K27ME3 | 590 | 403 | All SZGR 2.0 genes in this pathway |
| YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 0 | 76 | 54 | All SZGR 2.0 genes in this pathway |
| LEE BMP2 TARGETS UP | 745 | 475 | All SZGR 2.0 genes in this pathway |
| TORCHIA TARGETS OF EWSR1 FLI1 FUSION DN | 321 | 200 | All SZGR 2.0 genes in this pathway |
| SERVITJA LIVER HNF1A TARGETS UP | 135 | 96 | All SZGR 2.0 genes in this pathway |
| KOHOUTEK CCNT2 TARGETS | 58 | 35 | All SZGR 2.0 genes in this pathway |
| WAKABAYASHI ADIPOGENESIS PPARG BOUND 8D | 658 | 397 | All SZGR 2.0 genes in this pathway |
| WANG MLL TARGETS | 289 | 188 | All SZGR 2.0 genes in this pathway |