Search results: The pahtway p1919 has 1174 genes in the original annotation. Currently, there are 695 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
89846FGD3ZFYVE5FYVE, RhoGEF and PH domain containing 3-CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
116983ACAP3CENTB5ArfGAP with coiled-coil, ankyrin repeat and PH domains 3-CV:PGCnp
DMG:Montano_2016
85352KIAA1644-KIAA1644-CV:PGCnp
57209ZNF248bA162G10.3zinc finger protein 24810p11.2DMG:Jaffe_2016
783CACNB2CACNLB2 | CAVB2 | MYSBcalcium voltage-gated channel auxiliary subunit beta 210p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
GO_Annotation
LK:YES
PMID:cooccur
CompositeSet
10659CELF2BRUNOL3 | CUGBP2 | ETR-3 | ETR3 | NAPORCUGBP, Elav-like family member 210p13CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
80013FAM188AC10orf97 | CARP | DERP5 | MST126 | MSTP126 | my042family with sequence similarity 188 member A10p13CV:PGCnp
DMG:Jaffe_2016
22944KINBTCD | KIN17 | Rts2Kin17 DNA and RNA binding protein10p14CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
22982DIP2CKIAA0934disco interacting protein 2 homolog C10p15.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1959EGR2AT591 | CMT1D | CMT4E | KROX20early growth response 210q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
220965FAM13CFAM13C1family with sequence similarity 13 member C10q21.1CV:GWASdb
CV:PGCnp
DNM:Xu_2012
CompositeSet
84890ADOC10orf222-aminoethanethiol (cysteamine) dioxygenase10q21.3CV:PGCnp
Expression
PMID:cooccur
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9469CHST3C6ST | C6ST1 | HSDcarbohydrate (chondroitin 6) sulfotransferase 310q22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
79009DDX50GU2 | GUB | RH-II/GuB | mcdrhDEAD-box helicase 5010q22.1CV:PGCnp
219743TYSND1NET41trypsin domain containing 110q22.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
219654ZCCHC24C10orf56 | Z3CXXC8zinc finger CCHC-type containing 2410q22.3CV:PGCnp
DMG:Wockner_2014
92211CDHR1CORD15 | PCDH21 | PRCAD | RP65cadherin related family member 110q23.1CV:PGCnp
81619TSPAN14DC-TM4F2 | TM4SF14tetraspanin 1410q23.1CV:PGCnp
DEG:Zhao_2015
29760BLNKAGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bcaB-cell linker10q23.2-q23.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
143282FGFBP3C10orf13 | FGF-BP3fibroblast growth factor binding protein 310q23.32CV:PGCnp
PMID:cooccur
4601MXI1MAD2 | MXD2 | MXI | bHLHc11MAX interactor 1, dimerization protein10q24-q25CV:GWASdb
CV:PGCnp
8861LDB1CLIM2 | NLILIM domain binding 110q24-q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
10724MGEA5MEA5 | NCOAT | OGAmeningioma expressed antigen 5 (hyaluronidase)10q24.1-q24.3CV:PGCnp
1586CYP17A1CPT7 | CYP17 | P450C17 | S17AHcytochrome P450 family 17 subfamily A member 110q24.3CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
LK:YES
81603TRIM8GERP | RNF27tripartite motif containing 810q24.3CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
83401ELOVL3CIG-30 | CIG30ELOVL fatty acid elongase 310q24.32CV:PGCnp
79803HPS6BLOC2S3HPS6, biogenesis of lysosomal organelles complex 2 subunit 310q24.32CV:PGCnpAscano FMRP targets
8038ADAM12ADAM12-OT1 | CAR10 | MCMP | MCMPMltna | MLTN | MLTNAADAM metallopeptidase domain 1210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
9184BUB3BUB3L | hBUB3BUB3 mitotic checkpoint protein10q26CV:GWAScat
CV:PGCnp
GSMA_IIA
51363CHST15BRAG | GALNAC4S-6STcarbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 1510q26CV:GWASdb
CV:PGCnp
GSMA_IIA
10570DPYSL4CRMP3 | DRP-4 | ULIP4dihydropyrimidinase like 410q26CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
2018EMX2-empty spiracles homeobox 210q26.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2869GRK5GPRK5G protein-coupled receptor kinase 510q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
340719NANOS1EC_Rep1a | NOS-1 | NOS1 | SPGF12nanos homolog 1 (Drosophila)10q26.11CV:PGCnp
DMG:Nishioka_2013
259217HSPA12A-heat shock protein family A (Hsp70) member 12A10q26.12CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9679FAM53BKIAA0140 | bA12J10.2 | smpfamily with sequence similarity 53 member B10q26.13CV:PGCnp
DEG:Zhao_2015
GSMA_IIA
Ascano FMRP targets
85442KNDC1C10orf23 | RASGEF2 | bB439H18.3kinase non-catalytic C-lobe domain (KIND) containing 110q26.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CompositeSet
Darnell FMRP targets
5795PTPRJCD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1protein tyrosine phosphatase, receptor type J11p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8525DGKZDAGK5 | DAGK6 | DGK-ZETA | hDGKzetadiacylglycerol kinase zeta11p11.2CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51317PHF21ABHC80 | BM-006PHD finger protein 21A11p11.2CV:PGCnp
PMID:cooccur
8534CHST1C6ST | GST-1 | KS6ST | KSGal6ST | KSSTcarbohydrate sulfotransferase 111p11.2CV:PGCnp
2132EXT2SOTV | SSMSexostosin glycosyltransferase 211p12-p11CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
25841ABTB2ABTB2A | BTBD22ankyrin repeat and BTB domain containing 211p13CV:PGCnp
DMG:Nishioka_2013
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
79899PRR5LPROTOR2proline rich 5 like11p13-p12CV:PGCnp
10083USH1CAIE-75 | DFNB18 | DFNB18A | NY-CO-37 | NY-CO-38 | PDZ-45 | PDZ-73 | PDZ-73/NY-CO-38 | PDZ73 | PDZD7C | ush1cpstUSH1 protein network component harmonin11p14.3CV:PGCnp
144100PLEKHA7-pleckstrin homology domain containing A711p15.1CV:PGCnpAscano FMRP targets
644943RASSF10-Ras association domain family member 1011p15.2CV:PGCnp
DMG:Wockner_2014
55553SOX6HSSOX6 | SOXDSRY-box 611p15.3CV:PGCnp
PMID:cooccur
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
7762ZNF215BAZ-2 | BAZ2 | ZKSCAN11 | ZSCAN43zinc finger protein 21511p15.4CV:PGCnp
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
54472TOLLIPIL-1RAcPIPtoll interacting protein11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
3784KCNQ1ATFB1 | ATFB3 | JLNS1 | KCNA8 | KCNA9 | KVLQT1 | Kv1.9 | Kv7.1 | LQT | LQT1 | RWS | SQT2 | WRSpotassium voltage-gated channel subfamily Q member 111p15.5CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
PMID:cooccur
7275TUBRDOB | rd5tubby bipartite transcription factor11p15.5CV:PGCnp
DNM:Xu_2012
CompositeSet
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
3265HRASC-BAS/HAS | C-H-RAS | C-HA-RAS1 | CTLO | H-RASIDX | HAMSV | HRAS1 | RASH1 | p21rasHarvey rat sarcoma viral oncogene homolog11p15.5CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
64787EPS8L2EPS8R2EPS8 like 211p15.5CV:PGCnp
DMG:Wockner_2014
283120H19ASM | ASM1 | BWS | D11S813E | LINC00008 | NCRNA00008 | WT2H19, imprinted maternally expressed transcript (non-protein coding)11p15.5CV:PGCnp
PMID:cooccur
10522DEAF1MRD24 | NUDR | SPN | ZMYND5DEAF1, transcription factor11p15.5CV:PGCnp
DMG:Wockner_2014
28992MACROD1LRP16MACRO domain containing 111q11CV:PGCnp
10978CLP1HEAB | hClp1cleavage and polyadenylation factor I subunit 111q12CV:PGCnp
DMG:Jaffe_2016
220001VWCEURG11 | VWC1von Willebrand factor C and EGF domains11q12.2CV:PGCnp
DMG:Nishioka_2013
83759RBM4BRBM30 | RBM4L | ZCCHC15 | ZCCHC21B | ZCRB3BRNA binding motif protein 4B11q13CV:PGCnp
10089KCNK7K2p7.1 | TWIK3potassium two pore domain channel subfamily K member 711q13CV:PGCnp
408ARRB1ARB1 | ARR1arrestin, beta 111q13CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
582BBS1BBS2L2Bardet-Biedl syndrome 111q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9973CCS-copper chaperone for superoxide dismutase11q13CV:PGCnp
PMID:cooccur
254122SNX32SNX6Bsorting nexin 3211q13.1CV:PGCnp
DMG:Wockner_2014
22992KDM2ACXXC8 | FBL11 | FBL7 | FBXL11 | JHDM1A | LILINAlysine demethylase 2A11q13.2CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
116985ARAP1CENTD2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 111q13.4CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
9828ARHGEF17P164RHOGEF | TEM4 | p164-RhoGEFRho guanine nucleotide exchange factor 1711q13.4CV:PGCnpCompositeSet
Darnell FMRP targets
4041LRP5BMND1 | EVR1 | EVR4 | HBM | LR3 | LRP-5 | LRP7 | OPPG | OPS | OPTA1 | VBCH2LDL receptor related protein 511q13.4CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
Ascano FMRP targets
81544GDPD5GDE2 | PP1665glycerophosphodiester phosphodiesterase domain containing 511q13.4-q13.5CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
4135MAP6MAP6-N | MTAP6 | N-STOP | STOPmicrotubule associated protein 611q13.5Association
CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7481WNT11HWNT11wingless-type MMTV integration site family member 1111q13.5CV:PGCnp
DMG:Jaffe_2016
57558USP35-ubiquitin specific peptidase 3511q14.1CV:PGCnp
DMG:Wockner_2014
154810AMOTL1JEAPangiomotin like 111q14.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2526FUT4CD15 | ELFT | FCT3A | FUC-TIV | FUTIV | LeX | SSEA-1fucosyltransferase 411q21CV:GWASdb
CV:PGCnp
4321MMP12HME | ME | MME | MMP-12matrix metallopeptidase 1211q22.3CV:GWASdb
CV:PGCnp
55531ELMOD1-ELMO domain containing 111q22.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3587IL10RACD210 | CD210a | CDW210A | HIL-10R | IL-10R1 | IL10Rinterleukin 10 receptor subunit alpha11q23Association
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
PMID:cooccur
834CASP1ICE | IL1BC | P45caspase 111q23DEG:Sanders_2013
GSMA_I
Network
79796ALG9CDG1L | DIBD1 | LOH11CR1JALG9, alpha-1,2-mannosyltransferase11q23DMG:Jaffe_2016
GSMA_I
23705CADM1BL2 | IGSF4 | IGSF4A | NECL2 | Necl-2 | RA175 | ST17 | SYNCAM | TSLC1 | sTSLC-1 | sgIGSF | synCAM1cell adhesion molecule 111q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
23621BACE1ASP2 | BACE | HSPC104beta-site APP-cleaving enzyme 111q23.2-q23.3GO_Annotation
GSMA_I
PMID:cooccur
22897CEP164NPHP15centrosomal protein 164kDa11q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
57476GRAMD1B-GRAM domain containing 1B11q24.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
220296HEPACAMGlialCAM | MLC2A | MLC2Bhepatic and glial cell adhesion molecule11q24.2CV:PGCnp
219833C11orf45-chromosome 11 open reading frame 4511q24.3DMG:Nishioka_2013
DMG:Wockner_2014
89944GLB1L2MST114 | MSTP114galactosidase beta 1 like 211q25CV:PGCnp
121512FGD4CMT4H | FRABP | ZFYVE6FYVE, RhoGEF and PH domain containing 412p11.21CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
8079MLF2NTN4myeloid leukemia factor 212p13CV:PGCnp
DEG:Zhao_2015
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2026ENO2HEL-S-279 | NSEenolase 2 (gamma, neuronal)12p13PMID:cooccurCELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1027CDKN1BCDKN4 | KIP1 | MEN1B | MEN4 | P27KIP1cyclin-dependent kinase inhibitor 1B12p13.1-p12CV:PGCnp
Network
PMID:cooccur
57121LPAR5GPR92 | GPR93 | KPG_010 | LPA5lysophosphatidic acid receptor 512p13.31DMG:vanEijk_2014
196528ARID2BAF200 | p200AT-rich interaction domain 212q12CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
784CACNB3CAB3 | CACNLB3calcium voltage-gated channel auxiliary subunit beta 312q13CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1280COL2A1ANFH | AOM | COL11A3 | SEDC | STL1collagen type II alpha 112q13.11CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
55716LMBR1LLIMRlimb development membrane protein 1 like12q13.12DMG:Wockner_2014
112ADCY6AC6 | LCCS8adenylate cyclase 612q13.12CV:PGCnp
Network
25946ZNF385AHZF | RZF | ZFP385 | ZNF385zinc finger protein 385A12q13.13CV:PGCnp
DMG:Wockner_2014
27165GLS2GA | GLS | LGA | hLGAglutaminase 212q13.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
3229HOXC13ECTD9 | HOX3 | HOX3Ghomeobox C1312q13.3CV:PGCnp
DMG:Jaffe_2016
9958USP15UNPH-2 | UNPH4ubiquitin specific peptidase 1512q14CV:PGCnp
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
121601ANO4TMEM16Danoctamin 412q23.1CV:GWASdb
CV:PGCnp
55592GOLGA2P5GOLGA2B | GOLGA2L1golgin A2 pseudogene 512q23.1CV:GWASdb
CV:PGCnp
429ASCL1ASH1 | HASH1 | MASH1 | bHLHa46achaete-scute family bHLH transcription factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
79158GNPTABGNPTA | ICDN-acetylglucosamine-1-phosphate transferase alpha and beta subunits12q23.2CV:PGCnp
DMG:Wockner_2014
121551BTBD11ABTB2BBTB domain containing 1112q23.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
84329HVCN1HV1 | VSOPhydrogen voltage gated channel 112q24.11CV:PGCnp
400073C12orf76-chromosome 12 open reading frame 7612q24.11CV:PGCnp
92558CCDC64BICDR-1 | H_267D11.1coiled-coil domain containing 6412q24.23CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
196383RILPL2RLP2Rab interacting lysosomal protein like 212q24.31CV:PGCnp
DMG:Jaffe_2016
LK:YES
22877MLXIPMIR | MONDOA | bHLHe36MLX interacting protein12q24.31CV:PGCnp
DMG:Montano_2016
84678KDM2BCXXC2 | FBXL10 | Fbl10 | JHDM1B | PCCX2lysine demethylase 2B12q24.31CV:PGCnp
DMG:Wockner_2014
DNM:Girard_2011
CompositeSet
Chromatin Remodeling Genes
23504RIMBP2PPP1R133 | RBP2 | RIM-BP2RIMS binding protein 212q24.33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10804GJB6CX30 | DFNA3 | DFNA3B | DFNB1B | ECTD2 | ED2 | EDH | HED | HED2gap junction protein beta 613q12CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
4093SMAD9MADH6 | MADH9 | PPH2 | SMAD8 | SMAD8/9 | SMAD8A | SMAD8BSMAD family member 913q12-q14GO_Annotation
Network
650794MIPEPP3-mitochondrial intermediate peptidase pseudogene 313q12.11CV:PGCnp
2700GJA3CTRCT14 | CX46 | CZP3gap junction protein alpha 313q12.11CV:PGCnp
DMG:Jaffe_2016
23281MTUS2CAZIP | ICIS | KIAA0774 | TIP150microtubule associated tumor suppressor candidate 213q12.3CV:PGCnp
DMG:Wockner_2014
4081MAB21L1CAGR1 | Nbla00126mab-21-like 1 (C. elegans)13q13PMID:cooccur
9201DCLK1CL1 | CLICK1 | DCAMKL1 | DCDC3A | DCLKdoublecortin like kinase 113q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10129FRY13CDNA73 | 214K23.2 | C13orf14 | CG003 | bA207N4.2 | bA37E23.1FRY microtubule binding protein13q13.1CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
144811LACC1C13orf31laccase domain containing 113q14.11CV:PGCnp
253512SLC25A30KMCP1solute carrier family 25 member 3013q14.13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
1910EDNRBABCDS | ET-B | ET-BR | ETB | ETB1 | ETBR | ETRB | HSCR | HSCR2 | WS4Aendothelin receptor type B13q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4008LMO7FBX20 | FBXO20 | LOMPLIM domain 713q22.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CompositeSet
Ascano FMRP targets
7546ZIC2HPE5Zic family member 213q32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
22873DZIP1DZIP | DZIPt1DAZ interacting zinc finger protein 113q32.1CV:PGCnp
23348DOCK9ZIZ1 | ZIZIMIN1dedicator of cytokinesis 913q32.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23263MCF2LARHGEF14 | DBS | OSTMCF.2 cell line derived transforming sequence like13q34CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
26020LRP10LRP9 | MST087 | MSTP087LDL receptor related protein 1014q11.2CV:PGCnp
GSMA_I
PMID:cooccur
64403CDH24CDH11Lcadherin 2414q11.2GSMA_I
171546SPTSSAC14orf147 | SSSPTAserine palmitoyltransferase small subunit A14q13.1CV:GWASdb
CV:PGCnp
54813KLHL28BTBD5kelch like family member 2814q21.2CV:PGCnp
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
51339DACT1DAPPER | DAPPER1 | DPR1 | FRODO | HDPR1 | THYEX3dishevelled-binding antagonist of beta-catenin 114q23.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
53349ZFYVE1DFCP1 | PPP1R172 | SR3 | TAFF1 | ZNFN2A1zinc finger FYVE-type containing 114q24.2CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
64207IRF2BPLC14orf4 | EAP1interferon regulatory factor 2 binding protein-like14q24.3CV:PGCnp
DMG:Jaffe_2016
54207KCNK10K2p10.1 | PPP1R97 | TREK-2 | TREK2potassium two pore domain channel subfamily K member 1014q31.3CV:GWASdb
CV:PGCnp
PMID:cooccur
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
8812CCNKCPR4cyclin K14q32CV:PGCnp
DMG:Jaffe_2016
2009EML1ELP79 | EMAP | EMAPL | HuEMAPechinoderm microtubule associated protein like 114q32CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
55384MEG3FP504 | GTL2 | LINC00023 | NCRNA00023 | PRO0518 | PRO2160 | onco-lncRNA-83 | prebp1maternally expressed 3 (non-protein coding)14q32CV:PGCnp
DMG:Wockner_2014
Expression
1152CKBB-CK | BCK | CKBB | HEL-211 | HEL-S-29creatine kinase, brain14q32CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51676ASB2ASB-2ankyrin repeat and SOCS box containing 214q32.12CV:PGCnp
1397CRIP2CRIP | CRP2 | ESP1cysteine rich protein 214q32.3DMG:Wockner_2014CompositeSet
91833WDR20DMRWD repeat domain 2014q32.31CV:PGCnp
DMG:Wockner_2014
9895TECPR2KIAA0329 | SPG49tectonin beta-propeller repeat containing 214q32.31CV:PGCnpAscano FMRP targets
122622ADSSL1-adenylosuccinate synthase like 114q32.33CV:PGCnp
DMG:Wockner_2014
113146AHNAK2C14orf78AHNAK nucleoprotein 214q32.33CV:PGCnp
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
26153KIF26A-kinesin family member 26A14q32.33CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
1396CRIP1CRHP | CRIP | CRP-1 | CRP1cysteine rich protein 114q32.33DMG:Wockner_2014
6638SNRPNHCERN3 | PWCR | RT-LI | SM-D | SMN | SNRNP-N | SNURF-SNRPN | sm-Nsmall nuclear ribonucleoprotein polypeptide N15q11.2CNV:YES
CV:PGCnp
Network
PMID:cooccur
59274MESDC1-mesoderm development candidate 115q13CV:PGCnp
DMG:Jaffe_2016
728498GOLGA8HGOLGA6L11golgin A8 family member H15q13.2CNV:YES
440270GOLGA8BGOLGA5golgin A8 family member B15q14CV:PGCnp
DMG:Wockner_2014
84529C15orf41HH114chromosome 15 open reading frame 4115q14CV:PGCnp
825CAPN3CANP3 | CANPL3 | LGMD2 | LGMD2A | nCL-1 | p94calpain 315q15.1CV:PGCnp
85455DISP2DISPB | HsT16908dispatched RND transporter family member 215q15.1CV:PGCnpCompositeSet
Darnell FMRP targets
2595GANC-glucosidase, alpha; neutral C15q15.2CV:PGCnp
255252LRRC57-leucine rich repeat containing 5715q15.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
84978FRMD5-FERM domain containing 515q15.3CV:PGCnp
DMG:Nishioka_2013
2628GATMAGAT | AT | CCDS3glycine amidinotransferase15q21.1DMG:Wockner_2014
90527DUOXA1NIP | NUMBIP | moldual oxidase maturation factor 115q21.1DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
342035GLDNCLOM | COLM | CRG-L2 | CRGL2 | UNC-112gliomedin15q21.2CV:PGCnp
GO_Annotation
84952CGNL1JACOPcingulin-like 115q21.3CV:PGCnp
GO_Annotation
PMID:cooccur
4016LOXL1LOL | LOXLlysyl oxidase like 115q22CV:PGCnp
CV:PheWAS
6095RORANR1F1 | ROR1 | ROR2 | ROR3 | RZR-ALPHA | RZRARAR related orphan receptor A15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
54832VPS13C-vacuolar protein sorting 13 homolog C (S. cerevisiae)15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
4091SMAD6AOVD2 | HsT17432 | MADH6 | MADH7SMAD family member 615q22.31CV:PGCnp
DMG:Wockner_2014
54956PARP16ARTD15 | C15orf30 | pART15poly(ADP-ribose) polymerase family member 1615q22.31CV:PGCnp
DMG:Jaffe_2016
196996GRAMD2-GRAM domain containing 215q23CV:PGCnp
DMG:Wockner_2014
9915ARNT2WEDAS | bHLHe1aryl hydrocarbon receptor nuclear translocator 215q24CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
1198CLK3PHCLK3 | PHCLK3/152CDC like kinase 315q24DMG:Jaffe_2016
388135C15orf59-chromosome 15 open reading frame 5915q24.1CV:PGCnp
1464CSPG4HMW-MAA | MCSP | MCSPG | MEL-CSPG | MSK16 | NG2chondroitin sulfate proteoglycan 415q24.2CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
CompositeSet
11173ADAMTS7ADAM-TS 7 | ADAM-TS7 | ADAMTS-7ADAM metallopeptidase with thrombospondin type 1 motif 715q24.2CV:PGCnp
597BCL2A1ACC-1 | ACC-2 | ACC1 | ACC2 | BCL2L5 | BFL1 | GRS | HBPA1BCL2 related protein A115q24.3CV:GWASdb
CV:PGCnp
84206MEX3BMEX-3B | RKHD3 | RNF195mex-3 RNA binding family member B15q25.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4205MEF2AADCAD1 | RSRFC4 | RSRFC9 | mef2myocyte enhancer factor 2A15q26CV:PGCnp
PMID:cooccur
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
204219CERS3ARCI9 | LASS3ceramide synthase 315q26.3CV:PGCnp
Expression
PMID:cooccur
23336SYNMDMN | SYNsynemin15q26.3CV:PGCnp
DMG:Jaffe_2016
83719YPEL3-yippee like 316p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
729993SHISA9CKAMP44shisa family member 916p13.12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIE
7249TSC2LAM | PPP1R160 | TSC4tuberous sclerosis 216p13.3CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
64711HS3ST63-OST-6 | HS3ST5heparan sulfate-glucosamine 3-sulfotransferase 616p13.3CV:PGCnp
64718UNKLC16orf28 | ZC3H5L | ZC3HDC5Lunkempt family like zinc finger16p13.3CV:PGCnp
DMG:Montano_2016
Ascano FMRP targets
84662GLIS2NKL | NPHP7GLIS family zinc finger 216p13.3CV:PGCnp
GO_Annotation
1775DNASE1L2DNAS1L2deoxyribonuclease I-like 216p13.3DNM:Fromer_2014CompositeSet
3029HAGHGLO2 | GLX2 | GLXII | HAGH1hydroxyacylglutathione hydrolase16p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
114990VASNSLITL2vasorin16p13.3CV:PGCnp
DMG:Wockner_2014
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
388272C16orf87-chromosome 16 open reading frame 8716q11.2CV:PGCnp
DMG:Jaffe_2016
84706GPT2ALT2 | GPT 2 | MRT49glutamic pyruvate transaminase (alanine aminotransferase) 216q12.1CV:PGCnp
GO_Annotation
GSMA_IIE
Ascano FMRP targets
83752LONP2LONP | LONPLlon peptidase 2, peroxisomal16q12.1DMG:Wockner_2014
GO_Annotation
GSMA_IIE
64400AKTIPFT1 | FTSAKT interacting protein16q12.2CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
10265IRX5HMMS | IRX-2a | IRXB2iroquois homeobox 516q12.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6376CX3CL1ABCD-3 | C3Xkine | CXC3 | CXC3C | NTN | NTT | SCYD1 | fractalkine | neurotactinC-X3-C motif chemokine ligand 116q13CV:PGCnp
PMID:cooccur
146223CMTM4CKLFSF4CKLF like MARVEL transmembrane domain containing 416q21-q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
3291HSD11B2AME | AME1 | HSD11K | HSD2 | SDR9C3hydroxysteroid (11-beta) dehydrogenase 216q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
4094MAFAYGRP | CCA4 | CTRCT21 | c-MAFv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog16q22-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
92154MTSS1LABBA-1metastasis suppressor 1-like16q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
146198ZFP90FIK | NK10 | ZNF756 | zfp-90ZFP90 zinc finger protein16q22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
8824CES2CE-2 | CES2A1 | PCE-2 | iCEcarboxylesterase 216q22.1CV:PGCnp
80004ESRP2RBM35Bepithelial splicing regulatory protein 216q22.1CV:PGCnp
DMG:Jaffe_2016
79152FA2HFAAH | FAH1 | FAXDC1 | SCS7 | SPG35fatty acid 2-hydroxylase16q23CV:GWASdb
CV:PGCnp
PMID:cooccur
2294FOXF1ACDMPV | FKHL5 | FREAC1forkhead box F116q24DMG:Jaffe_2016
863CBFA2T3ETO2 | MTG16 | MTGR2 | ZMYND4core-binding factor, runt domain, alpha subunit 2; translocated to, 316q24CV:PGCnp
DMG:Wockner_2014
23174ZCCHC14BDG-29 | BDG29zinc finger CCHC-type containing 1416q24.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
124044SPATA2LC16orf76 | tamospermatogenesis associated 2 like16q24.3CV:PGCnp
57338JPH3CAGL237 | HDL2 | JP-3 | JP3 | TNRC22junctophilin 316q24.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
3768KCNJ12IRK-2 | IRK2 | KCNJN1 | Kir2.2 | Kir2.2v | hIRK | hIRK1 | hkir2.2x | kcnj12xpotassium voltage-gated channel subfamily J member 1217p11.2CV:PGCnp
DMG:Wockner_2014
Network
EXCITABILITY
644815FAM83GPAWS1family with sequence similarity 83 member G17p11.2CV:PGCnpAscano FMRP targets
55244SLC47A1MATE1solute carrier family 47 member 117p11.2CV:PGCnp
DMG:Wockner_2014
51393TRPV2VRL | VRL-1 | VRL1transient receptor potential cation channel subfamily V member 217p11.2CV:PGCnp
3996LLGL1DLG4 | HUGL | HUGL-1 | HUGL1 | LLGL | Lgl1 | Mgl1lethal giant larvae homolog 1, scribble cell polarity complex component17p11.2CV:PGCnp
DNM:McCarthy_2014
CompositeSet
Darnell FMRP targets
91647ATPAF2ATP12 | ATP12p | LP3663 | MC5DN1ATP synthase mitochondrial F1 complex assembly factor 217p11.2CV:PGCnp
9912ARHGAP44NPC-A-10 | RICH2Rho GTPase activating protein 4417p12CV:PGCnp
9423NTN1NTN1Lnetrin 117p13.1CV:GWASdb
CV:PGCnp
GO_Annotation
Ascano FMRP targets
124975GGT6-gamma-glutamyltransferase 617p13.2CV:PGCnp
DMG:Wockner_2014
124976SPNS2-spinster homolog 2 (Drosophila)17p13.2CV:PGCnp
DMG:Jaffe_2016
29ABRMDBactive BCR-related17p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
443ASPAACY2 | ASPaspartoacylase17p13.3CV:PGCnp
PMID:cooccur
3090HIC1ZBTB29 | ZNF901 | hic-1hypermethylated in cancer 117p13.3CV:PGCnp
9618TRAF4CART1 | MLN62 | RNF83TNF receptor associated factor 417q11-q12CV:PGCnp
PMID:cooccur
9094UNC119HRG4 | IMD13 | POC7 | POC7Aunc-119 lipid binding chaperone17q11.2DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
642BLMHBH | BMHbleomycin hydrolase17q11.2CV:PGCnp
113235SLC46A1G21 | HCP1 | PCFTsolute carrier family 46 member 117q11.2CV:PGCnp
PMID:cooccur
55803ADAP2CENTA2 | HSA272195 | cent-bArfGAP with dual PH domains 217q11.2CV:PGCnp
84961FBXL20Fbl2 | Fbl20F-box and leucine-rich repeat protein 2017q12CV:PGCnpPotential synaptic genes
10014HDAC5HD5 | NY-CO-9histone deacetylase 517q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
1747DLX3AI4 | TDOdistal-less homeobox 317q21CV:PGCnp
DMG:Wockner_2014
9020MAP3K14FTDCR1B | HS | HSNIK | NIKmitogen-activated protein kinase kinase kinase 1417q21CV:PGCnp
Network
162427FAM134C-family with sequence similarity 134 member C17q21.2CV:PGCnp
DMG:Jaffe_2016
201176ARHGAP27CAMGAP1 | PP905 | SH3D20 | SH3P20Rho GTPase activating protein 2717q21.31CV:PGCnp
2896GRNCLN11 | GEP | GP88 | PCDGF | PEPI | PGRNgranulin17q21.32CV:PGCnp
PMID:cooccur
56934CA10CA-RPX | CARPX | HUCEP-15carbonic anhydrase X17q21.33CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
92335STRADALYK5 | NY-BR-96 | PMSE | STRAD | StlkSTE20-related kinase adaptor alpha17q23.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
90799CEP95CCDC45centrosomal protein 95kDa17q23.3DMG:Jaffe_2016
10458BAIAP2BAP2 | FLAF3 | IRSP53BAI1 associated protein 217q25CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
3607FOXK2ILF | ILF-1 | ILF1forkhead box K217q25CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10801SEPT9AF17q25 | MSF | MSF1 | NAPB | PNUTL4 | SINT1 | SeptD1septin 917q25CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2232FDXRADXRferredoxin reductase17q25.1DMG:Wockner_2014
2125EVPLEVPKenvoplakin17q25.1CV:GWASdb
CV:PGCnp
94015TTYH2C17orf29tweety family member 217q25.1CV:PGCnp
DEG:Zhao_2015
2548GAALYAGglucosidase, alpha; acid17q25.2-q25.3PMID:cooccur
8811GALR2GAL2-R | GALNR2 | GALR-2galanin receptor 217q25.3GO_Annotation
PMID:cooccur
79058ASPSCR1ASPCR1 | ASPL | ASPS | RCC17 | TUG | UBXD9 | UBXN9alveolar soft part sarcoma chromosome region, candidate 117q25.3CV:PGCnp
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
57674RNF213ALO17 | C17orf27 | KIAA1618 | MYMY2 | MYSTR | NET57ring finger protein 21317q25.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
57690TNRC6C-trinucleotide repeat containing 6C17q25.3CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
79755ZNF750ZFP750zinc finger protein 75017q25.3CV:GWASdb
CV:PGCnp
PMID:cooccur
114897C1QTNF1CTRP1 | GIP | ZSIG37C1q and tumor necrosis factor related protein 117q25.3CV:PGCnp
4161MC5RMC2melanocortin 5 receptor18p11.2CV:PGCnp
PMID:cooccur
23136EPB41L34.1B | DAL-1 | DAL1erythrocyte membrane protein band 4.1-like 318p11.32CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4092SMAD7CRCS3 | MADH7 | MADH8SMAD family member 718q21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9480ONECUT2OC-2 | OC2one cut homeobox 218q21.31CV:PGCnp
DMG:Jaffe_2016
5205ATP8B1ATPIC | BRIC | FIC1 | ICP1 | PFIC | PFIC1ATPase phospholipid transporting 8B118q21.31CV:PGCnp
CV:PheWAS
7562ZNF708KOX8 | ZNF15 | ZNF15L1zinc finger protein 70819p12CV:PGCnp
8529CYP4F2CPF2cytochrome P450 family 4 subfamily F member 219p13.12CV:PGCnp
4125MAN2B1LAMAN | MANBmannosidase alpha class 2B member 119p13.2CV:PGCnp
DMG:Montano_2016
54ACP5HPAP | SPENCDI | TRAPacid phosphatase 5, tartrate resistant19p13.2CV:PGCnp
84971ATG4DAPG4-D | APG4D | AUTL4autophagy related 4D cysteine peptidase19p13.2DMG:Jaffe_2016
53637S1PR5EDG8 | Edg-8 | S1P5 | SPPR-1 | SPPR-2sphingosine-1-phosphate receptor 519p13.2CV:PGCnp
DMG:vanEijk_2014
80131LRRC8E-leucine-rich repeat containing 8 family member E19p13.2CV:PGCnp
DMG:Wockner_2014
3726JUNBAP-1jun B proto-oncogene19p13.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23030KDM4BJMJD2B | TDRD14Blysine demethylase 4B19p13.3CV:PGCnp
DMG:Wockner_2014
Expression
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
1938EEF2EEF-2 | EF-2 | EF2 | SCA26eukaryotic translation elongation factor 219p13.3DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
10347ABCA7ABCA-SSN | ABCXATP binding cassette subfamily A member 719p13.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2593GAMTCCDS2 | HEL-S-20 | PIG2 | TP53I2guanidinoacetate N-methyltransferase19p13.3CV:PGCnp
DEG:Sanders_2013
729359PLIN4KIAA1881 | S3-12perilipin 419p13.3PMID:cooccur
2767GNA11FBH | FBH2 | FHH2 | GNA-11 | HHC2 | HYPOC2G protein subunit alpha 1119p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
56931DUS3LDUS3dihydrouridine synthase 3 like19p13.3CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
2788GNG7-G protein subunit gamma 719p13.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
3643INSRCD220 | HHF5insulin receptor19p13.3-p13.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Ascano FMRP targets
147700KLC3KLC2 | KLC2L | KLCt | KNS2Bkinesin light chain 319q13CV:PGCnp
DMG:Wockner_2014
29785CYP2S1CYPIIS1cytochrome P450 family 2 subfamily S member 119q13.1CV:PGCnp
DMG:Wockner_2014
Expression
1050CEBPAC/EBP-alpha | CEBPCCAAT/enhancer binding protein alpha19q13.1CV:PGCnp
342892ZNF850ZNF850Pzinc finger protein 85019q13.12CV:PGCnp
162989DEDD2FLAME-3death effector domain containing 219q13.2CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
2523FUT1H | HH | HSCfucosyltransferase 1 (H blood group)19q13.3CV:PGCnp
55769ZNF83HPF1 | ZNF816Bzinc finger protein 8319q13.3CV:PGCnp
DMG:Wockner_2014
57787MARK4MARK4L | MARK4S | MARKL1 | MARKL1L | PAR-1Dmicrotubule affinity regulating kinase 419q13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
342909ZNF284ZNF284Lzinc finger protein 28419q13.31DMG:Jaffe_2016
58491ZNF71EZFITzinc finger protein 7119q13.4CV:PGCnp
65251ZNF649-zinc finger protein 64919q13.41CV:PGCnp
79986ZNF702PZNF702zinc finger protein 702, pseudogene19q13.41CV:PGCnp
DMG:Wockner_2014
388566ZNF470CZF-1zinc finger protein 47019q13.43CV:PGCnp
54855FAM46C-family with sequence similarity 46 member C1p12CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
GSMA_IIA
163259DENND2CdJ1156J9.1DENN domain containing 2C1p13.2CV:PGCnp
GSMA_I
GSMA_IIA
80143SIKE1SIKEsuppressor of IKBKE 11p13.2CV:PGCnp
284611FAM102BSYM-3Bfamily with sequence similarity 102 member B1p13.3CV:PGCnp
DMG:Montano_2016
57535KIAA1324EIG121KIAA13241p13.3CV:PGCnp
DMG:Wockner_2014
3749KCNC4C1orf30 | HKSHIIIC | KSHIIIC | KV3.4potassium voltage-gated channel subfamily C member 41p21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
EXCITABILITY
1952CELSR2ADGRC2 | CDHF10 | EGFL2 | Flamingo1 | MEGF3cadherin EGF LAG seven-pass G-type receptor 21p21CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
255231MCOLN2TRP-ML2 | TRPML2mucolipin 21p22CV:PGCnp
23576DDAH1DDAH | HEL-S-16dimethylarginine dimethylaminohydrolase 11p22CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
NEUROTRANSMITTER METABOLISM
CompositeSet
9829DNAJC6DJC6 | PARK19DnaJ heat shock protein family (Hsp40) member C61p31.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
199920C1orf168-chromosome 1 open reading frame 1681p32.2CV:GWASdb
CV:PGCnp
79699ZYG11BZYG11zyg-11 family member B, cell cycle regulator1p32.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
2035EPB414.1R | EL1 | HEerythrocyte membrane protein band 4.11p33-p32CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
1907EDN2ET-2 | ET2 | PPET2endothelin 21p34CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
3633INPP5B5PTaseinositol polyphosphate-5-phosphatase B1p34CV:PGCnp
3652IPPKLHL27intracisternal A particle-promoted polypeptide1p34-p32CV:PGCnp
PMID:cooccur
127396ZNF684-zinc finger protein 6841p34.2CV:PGCnp
DMG:Wockner_2014
Expression
2899GRIK3EAA5 | GLR7 | GLUR7 | GluK3 | GluR7aglutamate ionotropic receptor kainate type subunit 31p34.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
LIGAND GATED ION SIGNALING
CompositeSet
Darnell FMRP targets
Potential synaptic genes
339488TFAP2EAP2Etranscription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)1p34.3CV:PGCnp
5724PTAFRPAFRplatelet activating factor receptor1p35-p34.3CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
200081TXLNAIL14 | TXLNtaxilin alpha1p35.1CV:PGCnp
DMG:vanEijk_2014
64744SMAP2SMAP1Lsmall ArfGAP21p35.3-p34.1CV:PGCnp
DNM:Xu_2012
CompositeSet
80818ZNF436ZNF | Zfp46zinc finger protein 4361p36DMG:Jaffe_2016
7798LUZP1LUZPleucine zipper protein 11p36CV:PGCnp
DNM:Fromer_2014
CompositeSet
79258MMEL1MMEL2 | NEP2 | NEPII | NL1 | NL2 | SEPmembrane metallo-endopeptidase-like 11p36CV:PGCnp
DMG:Wockner_2014
8659ALDH4A1ALDH4 | P5CD | P5CDhaldehyde dehydrogenase 4 family member A11p36CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
26119LDLRAP1ARH | ARH1 | ARH2 | FHCB1 | FHCB2low density lipoprotein receptor adaptor protein 11p36.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
163933FAM43B-family with sequence similarity 43 member B1p36.12CV:PGCnp
DMG:Wockner_2014
27245AHDC1MRD25AT-hook DNA binding motif containing 11p36.13CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9696CROCCROLTciliary rootlet coiled-coil, rootletin1p36.13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
23254KAZNKAZkazrin, periplakin interacting protein1p36.21CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
54361WNT4SERKAL | WNT-4wingless-type MMTV integration site family member 41p36.23-p35.1CV:PGCnp
1953MEGF6EGFL3multiple EGF like domains 61p36.3CV:PGCnp
DMG:Wockner_2014
7161TP73P73tumor protein p731p36.3CV:PGCnp
DMG:Wockner_2014
3104ZBTB48HKR3 | ZNF855 | pp9964zinc finger and BTB domain containing 481p36.3CV:PGCnp
1676DFFADFF-45 | DFF1 | ICADDNA fragmentation factor subunit alpha1p36.3-p36.2DMG:Jaffe_2016
DMG:Wockner_2014
Network
54626HES2bHLHb40hes family bHLH transcription factor 21p36.31CV:PGCnp
DMG:Wockner_2014
9903KLHL21-kelch like family member 211p36.31CV:PGCnpAscano FMRP targets
83715ESPNDFNB36 | LP2654espin1p36.31CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
23261CAMTA1CANPMRcalmodulin binding transcription activator 11p36.31-p36.23CV:PGCnp
DNM:McCarthy_2014
CompositeSet
Darnell FMRP targets
142678MIB2ZZANK1 | ZZZ5mindbomb E3 ubiquitin protein ligase 21p36.33DMG:Wockner_2014
64856VWA1WARPvon Willebrand factor A domain containing 11p36.33DEG:Zhao_2015
1942EFNA1B61 | ECKLG | EFL1 | EPLG1 | LERK-1 | LERK1 | TNFAIP4ephrin-A11q21-q22CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
84265POLR3GLRPC32HOM | flj32422polymerase (RNA) III subunit G like1q21.1CNV:YES
GSMA_I
GSMA_IIA
8349HIST2H2BEGL105 | H2B | H2B.1 | H2BFQ | H2BGL105 | H2BQhistone cluster 2, H2be1q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
55793FAM63A-family with sequence similarity 63 member A1q21.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
GSMA_IIA
55585UBE2Q1GTAP | NICE-5 | PRO3094 | UBE2Qubiquitin conjugating enzyme E2 Q11q21.3CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
55870ASH1LASH1 | ASH1L1 | KMT2Hash1 (absent, small, or homeotic)-like (Drosophila)1q22CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
375033PEAR1JEDI | MEGF12platelet endothelial aggregation receptor 11q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
387597ILDR2C1orf32 | dJ782G3.1immunoglobulin like domain containing receptor 21q24.1CV:PGCnp
DMG:Jaffe_2016
27252KLHL20KHLHX | KLEIP | KLHLXkelch like family member 201q25.1CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
64222TOR3AADIR | ADIR2torsin family 3 member A1q25.2CV:PGCnp
DMG:Jaffe_2016
7832BTG2PC3 | TIS21BTG family member 21q32CV:PGCnp
PMID:cooccur
7188TRAF5MGC:39780 | RNF84TNF receptor associated factor 51q32CV:PGCnp
DMG:Wockner_2014
127829ARL8AARL10B | GIE2ADP ribosylation factor like GTPase 8A1q32.1CV:PGCnp
DMG:Jaffe_2016
25778DSTYKCAKUT1 | DustyPK | HDCMD38P | RIP5 | RIPK5dual serine/threonine and tyrosine protein kinase1q32.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
9911TMCC2HUCEP11transmembrane and coiled-coil domain family 21q32.1CV:PGCnp
DMG:Jaffe_2016
29097CNIH4CNIH-4 | HSPC163cornichon family AMPA receptor auxiliary protein 41q42.11CV:PGCnp
Expression
9725TMEM63AKIAA0792transmembrane protein 63A1q42.12CV:PGCnp
DMG:Wockner_2014
Expression
84033OBSCNARHGEF30 | UNC89obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF1q42.13CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
3707ITPKBIP3-3KB | IP3K | IP3K-B | IP3KB | PIG37inositol-trisphosphate 3-kinase B1q42.13CV:PGCnp
DMG:Wockner_2014
Network
79894ZNF672-zinc finger protein 6721q44CV:PGCnp
DMG:Jaffe_2016
1471CST3ARMD11 | HEL-S-2cystatin C20p11.21Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
55614KIF16BC20orf23 | KISC20ORF | SNX23kinesin family member 16B20p11.23CV:PGCnp
79175ZNF343dJ734P14.5zinc finger protein 34320p13CV:PGCnp
DMG:Jaffe_2016
9139CBFA2T2EHT | MTGR1 | ZMYND3 | p85core-binding factor, runt domain, alpha subunit 2; translocated to, 220q11CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
1789DNMT3BICF | ICF1 | M.HsaIIIBDNA (cytosine-5-)-methyltransferase 3 beta20q11.2CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
9371KIF3BFLA8 | HH0048 | KLP-11kinesin family member 3B20q11.21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
84905ZNF341-zinc finger protein 34120q11.22CV:PGCnp
CV:PheWAS
140679SLC32A1VGAT | VIAATsolute carrier family 32 member 120q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
81610FAM83DC20orf129 | CHICA | dJ616B8.3family with sequence similarity 83 member D20q11.23CV:PGCnp
10904BLCAPBC10bladder cancer associated protein20q11.23CV:PGCnp
DMG:Jaffe_2016
90187EMILIN3C20orf130 | EMILIN5 | dJ620E11.4elastin microfibril interfacer 320q12CV:PGCnp
DMG:Wockner_2014
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
655BMP7OP-1bone morphogenetic protein 720q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
149708WFDC5PRG5 | WAP1 | dJ211D12.5WAP four-disulfide core domain 520q13.12CV:PGCnp
128486FITM2C20orf142 | Fit2 | dJ881L22.2fat storage-inducing transmembrane protein 220q13.12CV:PGCnp
DMG:Jaffe_2016
Expression
57169ZNFX1-zinc finger, NFX1-type containing 120q13.13CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10564ARFGEF2BIG2 | PVNH2 | dJ1164I10.1ADP ribosylation factor guanine nucleotide exchange factor 220q13.13CV:PGCnpAscano FMRP targets
3745KCNB1DRK1 | EIEE26 | KV2.1 | h-DRK1potassium voltage-gated channel subfamily B member 120q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
84619ZGPATGPATC6 | GPATCH6 | KIAA1847 | ZC3H9 | ZC3HDC9 | ZIPzinc finger CCCH-type and G-patch domain containing20q13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
2778GNASAHO | C20orf45 | GNAS1 | GPSA | GSA | GSP | NESP | POH | SCG6 | SgVIGNAS complex locus20q13.3Association
CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
DOPAMINE
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
140628GATA5GATAS | bB379O24.1GATA binding protein 520q13.33CV:PGCnp
DMG:Wockner_2014
11047ADRM1ARM-1 | ARM1 | GP110adhesion regulating molecule 120q13.33CV:PGCnp
81928CABLES2C20orf150 | dJ908M14.2 | ik3-2Cdk5 and Abl enzyme substrate 220q13.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
11083DIDO1BYE1 | C20orf158 | DATF-1 | DATF1 | DIDO2 | DIDO3 | DIO-1 | DIO1 | dJ885L7.8death inducer-obliterator 120q13.33CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
4661MYT1C20orf36 | MTF1 | MYTI | NZF2 | PLPB1 | ZC2HC4Amyelin transcription factor 120q13.33CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
1525CXADRCAR | CAR4/6 | HCARcoxsackie virus and adenovirus receptor21q21.1CV:PGCnp
GO_Annotation
11096ADAMTS5ADAM-TS 11 | ADAM-TS 5 | ADAM-TS5 | ADAMTS-11 | ADAMTS-5 | ADAMTS11 | ADMP-2ADAM metallopeptidase with thrombospondin type 1 motif 521q21.3CV:PGCnp
DMG:Jaffe_2016
30811HUNK-hormonally up-regulated Neu-associated kinase21q22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
57466SCAF4SFRS15 | SRA4SR-related CTD associated factor 421q22.1CV:PGCnp
9875URB1C21orf108 | NPA1URB1 ribosome biogenesis 1 homolog (S. cerevisiae)21q22.11DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
3772KCNJ15IRKK | KIR1.3 | KIR4.2potassium voltage-gated channel subfamily J member 1521q22.2CV:PGCnp
DMG:Wockner_2014
54014BRWD1C21orf107 | DCAF19 | N143 | WDR9bromodomain and WD repeat domain containing 121q22.2CV:PGCnp
DEG:Sanders_2013
DMG:Nishioka_2013
Expression
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
4599MX1IFI-78K | IFI78 | MX | MxAMX dynamin like GTPase 121q22.3CV:PGCnp
PMID:cooccur
23181DIP2AC21orf106 | DIP2disco interacting protein 2 homolog A21q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
56894AGPAT3LPAAT-GAMMA1 | LPAAT31-acylglycerol-3-phosphate O-acyltransferase 321q22.3CV:PGCnpCompositeSet
Darnell FMRP targets
54101RIPK4ANKK2 | ANKRD3 | DIK | NKRD3 | PKK | PPS2 | RIP4receptor interacting serine/threonine kinase 421q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
637BIDFP497BH3 interacting domain death agonist22q11.1Expression
GO_Annotation
GSMA_I
PMID:cooccur
57553MICAL3MICAL-3microtubule associated monooxygenase, calponin and LIM domain containing 322q11.21CV:PGCnp
DMG:Wockner_2014
GSMA_I
23119HIC2HRG22 | ZBTB30 | ZNF907hypermethylated in cancer 222q11.21CNV:YES
GSMA_I
8218CLTCL1CHC22 | CLH22 | CLTCL | CLTDclathrin heavy chain like 122q11.21CNV:YES
CV:PGCnp
DNM:Gulsuner_2013
Expression
GSMA_I
79680C22orf29BOPchromosome 22 open reading frame 2922q11.21CNV:YES
CV:PGCnp
GSMA_I
2953GSTT2-glutathione S-transferase theta 2 (gene/pseudogene)22q11.23CV:PGCnp
Expression
GSMA_I
PMID:cooccur
85379KIAA1671-KIAA167122q11.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
23780APOL2APOL-II | APOL3apolipoprotein L222q12CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
150275CCDC117dJ366L4.1coiled-coil domain containing 11722q12.1CV:PGCnp
GSMA_I
157ADRBK2BARK2 | GRK3adrenergic, beta, receptor kinase 222q12.1CV:PGCnp
GSMA_I
PMID:cooccur
3985LIMK2-LIM domain kinase 222q12.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
7477WNT7B-wingless-type MMTV integration site family member 7B22q13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
3560IL2RBCD122 | IL15RB | P70-75interleukin 2 receptor subunit beta22q13.1CV:PGCnp
PMID:cooccur
9582APOBEC3BA3B | APOBEC1L | ARCD3 | ARP4 | DJ742C19.2 | PHRBNL | bK150C2.2apolipoprotein B mRNA editing enzyme catalytic subunit 3B22q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2847MCHR1GPR24 | MCH-1R | MCH1R | SLC-1 | SLC1melanin concentrating hormone receptor 122q13.2Association
CV:PGCnp
GO_Annotation
GR_WM
PMID:cooccur
27254CSDC2PIPPIN | dJ347H13.2cold shock domain containing C222q13.2CV:PGCnp
440829SHISA8C22orf17 | Orf26shisa family member 822q13.2CV:PGCnp
638BIKBIP1 | BP4 | NBKBCL2-interacting killer22q13.31CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
85378TUBGCP6GCP-6 | GCP6 | MCCRP | MCCRP1 | MCPHCRtubulin gamma complex associated protein 622q13.31-q13.33CV:PGCnp
DMG:Wockner_2014
23774BRD1BRL | BRPF1 | BRPF2bromodomain containing 122q13.33Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
23209MLC1LVM | MLC | VLmegalencephalic leukoencephalopathy with subcortical cysts 122q13.33Association
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
65055REEP1C2orf23 | HMN5B | SPG31 | Yip2areceptor accessory protein 12p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
347730LRRTM1-leucine rich repeat transmembrane neuronal 12p12GO_Annotation
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
26505CNNM3ACDP3cyclin and CBS domain divalent metal cation transport mediator 32p12-p11.2CV:PGCnp
DEG:Zhao_2015
DNM:Fromer_2014
GSMA_I
CompositeSet
150726FBXO41FBX41F-box protein 412p13.2CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
64395GMCL1BTBD13 | GCL | GCL1 | SPATA29germ cell-less, spermatogenesis associated 12p13.3CV:PGCnp
151516ASPRV1MUNO | SASP | SASPase | Tapsaspartic peptidase, retroviral-like 12p13.3CV:PGCnp
DMG:Montano_2016
9736USP34-ubiquitin specific peptidase 342p15CV:PGCnp
Expression
CompositeSet
Darnell FMRP targets
400954EML6-echinoderm microtubule associated protein like 62p16.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
170850KCNG3KV10.1 | KV6.3potassium voltage-gated channel modifier subfamily G member 32p21CV:PGCnp
PMID:cooccur
3777KCNK3K2p3.1 | OAT1 | PPH4 | TASK | TASK-1 | TBAK1potassium two pore domain channel subfamily K member 32p23CV:GWASdb
CV:PGCnp
GO_Annotation
50618ITSN2PRO2015 | SH3D1B | SH3P18 | SWA | SWAPintersectin 22p23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
165324UBXN2AUBXD4UBX domain protein 2A2p23.3CV:PGCnp
388RHOBARH6 | ARHB | MST081 | MSTP081 | RHOH6ras homolog family member B2p24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
7447VSNL1HLP3 | HPCAL3 | HUVISL1 | VILIP | VILIP-1visinin like 12p24.3CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
129607CMPK2NDK | TMPK2 | TYKi | UMP-CMPK2cytidine/uridine monophosphate kinase 22p25.2DNM:Fromer_2014CompositeSet
26504CNNM4ACDP4cyclin and CBS domain divalent metal cation transport mediator 42q11CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
55654TMEM127-transmembrane protein 1272q11.2CV:PGCnp
GSMA_I
80705TSGA10CEP4L | CT79testis specific 102q11.2CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
3631INPP4AINPP4 | TVAS1inositol polyphosphate-4-phosphatase type I A2q11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
3899AFF3LAF4 | MLLT2-likeAF4/FMR2 family member 32q11.2-q12CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
7535ZAP70SRK | STCD | STD | TZK | ZAP-70zeta chain of T cell receptor associated protein kinase 70kDa2q12CV:PGCnp
GO_Annotation
GSMA_I
84804MFSD9-major facilitator superfamily domain containing 92q12.1CV:PGCnp
Expression
GSMA_I
9392TGFBRAP1TRAP-1 | TRAP1 | VPS3transforming growth factor beta receptor associated protein 12q12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
10018BCL2L11BAM | BIM | BODBCL2 like 112q13CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
10461MERTKMER | RP38 | Tyro12 | c-Eyk | c-merMER proto-oncogene, tyrosine kinase2q14.1CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
339761CYP27C1-cytochrome P450 family 27 subfamily C member 12q14.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
9394HS6ST1HH15 | HS6STheparan sulfate 6-O-sulfotransferase 12q21CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Ascano FMRP targets
30818KCNIP3CSEN | DREAM | KCHIP3potassium voltage-gated channel interacting protein 32q21.1CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
50649ARHGEF4ASEF | ASEF1 | GEF4 | STM6Rho guanine nucleotide exchange factor 42q22CV:PGCnp
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
90ACVR1ACTRI | ACVR1A | ACVRLK2 | ALK2 | FOP | SKR1 | TSRIactivin A receptor type 12q23-q24CV:PGCnp
GSMA_IIA
PMID:cooccur
64135IFIH1AGS7 | Hlcd | IDDM19 | MDA-5 | MDA5 | RLR-2 | SGMRT1interferon induced, with helicase C domain 12q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
2571GAD1CPSQ1 | GAD | SCPglutamate decarboxylase 12q31Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
79901CYBRD1CYB561A2 | DCYTB | FRRS3cytochrome b reductase 12q31.1CV:PGCnp
3236HOXD10HOX4 | HOX4D | HOX4E | Hox-4.4homeobox D102q31.1CV:PGCnp
151556GPR155DEP.7 | DEPDC3 | PGR22G protein-coupled receptor 1552q31.1CV:PGCnp
DMG:Wockner_2014
142679DUSP19DUSP17 | LMWDSP3 | SKRP1 | TS-DSP1dual specificity phosphatase 192q32.1CV:PGCnp
DMG:Nishioka_2013
2487FRZBFRE | FRITZ | FRP-3 | FRZB-1 | FRZB-PEN | FRZB1 | FZRB | OS1 | SFRP3 | SRFP3 | hFIZfrizzled-related protein2q32.1CV:GWASdb
CV:PGCnp
Expression
66008TRAK2ALS2CR3 | CALS-C | GRIF-1 | GRIF1 | MILT2 | OIP98trafficking protein, kinesin binding 22q33CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
843CASP10ALPS2 | FLICE2 | MCH4caspase 102q33-q34CV:PGCnp
DMG:Wockner_2014
3549IHHBDA1 | HHG2indian hedgehog2q33-q35CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
80055PGAP1Bst1 | ISPD3024 | MRT42 | SPG67post-GPI attachment to proteins 12q33.1CV:PGCnp
7145TNS1MST091 | MST122 | MST127 | MSTP091 | MSTP122 | MSTP127 | MXRA6 | PPP1R155 | TNStensin 12q35-q36CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
1286COL4A4CA44collagen type IV alpha 42q35-q37CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
10058ABCB6ABC | ABC14 | DUH3 | LAN | MCOPCB7 | MTABC3 | PRP | PSHK2 | umatATP binding cassette subfamily B member 6 (Langereis blood group)2q36GSMA_IIA
GSMA_IIE
151473SLC16A14MCT14solute carrier family 16 member 142q36.3CV:PGCnp
DMG:Wockner_2014
116987AGAP1AGAP-1 | CENTG2 | GGAP1 | cnt-g2ArfGAP with GTPase domain, ankyrin repeat and PH domain 12q37CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
389084C2orf82UNQ830chromosome 2 open reading frame 822q37.1CV:GWAScat
CV:GWASdb
CV:PGCnp
LK:YES
129563DIS3L2FAM6A | PRLMNS | hDIS3L2DIS3 like 3'-5' exoribonuclease 22q37.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
93010B3GNT7beta3GnT7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 72q37.1|2q37.1CV:PGCnp
DMG:Montano_2016
Expression
PMID:cooccur
26146TRAF3IP1IFT54 | MIP-T3 | MIPT3 | SLSN9TRAF3 interacting protein 12q37.3CV:PGCnp
PMID:cooccur
57406ABHD6-abhydrolase domain containing 63p14.3CV:PGCnp
PMID:cooccur
4485MST1D3F15S2 | DNF15S2 | HGFL | MSP | NF15S2macrophage stimulating 13p21Expression
GO_Annotation
8314BAP1HUCEP-13 | UCHL2 | hucep-6BRCA1 associated protein 13p21.1LK:YESCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
11068CYB561D2101F6 | TSP10 | XXcos-LUCA11.4cytochrome b561 family member D23p21.3DMG:Jaffe_2016
DMG:vanEijk_2014
9254CACNA2D2CACNA2Dcalcium voltage-gated channel auxiliary subunit alpha2delta 23p21.3CV:PGCnp
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8994LIMD1-LIM domains containing 13p21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
3680ITGA9ALPHA-RLC | ITGA4L | RLCintegrin subunit alpha 93p21.3CV:PGCnp
GSMA_I
64147KIF9-kinesin family member 93p21.31CV:PGCnp
DMG:Jaffe_2016
Expression
79443FYCO1CATC2 | CTRCT18 | RUFY3 | ZFYVE7FYVE and coiled-coil domain containing 13p21.31CV:PGCnp
DMG:Wockner_2014
Expression
7433VIPR1HVR1 | II | PACAP-R-2 | PACAP-R2 | RDC1 | V1RG | VAPC1 | VIP-R-1 | VIPR | VIRG | VPAC1 | VPAC1R | VPCAP1Rvasoactive intestinal peptide receptor 13p22CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
GO_Annotation
Network
22906TRAK1MILT1 | OIP106trafficking protein, kinesin binding 13p22.1CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
26032SUSD5-sushi domain containing 53p22.3CV:PGCnp
GSMA_I
7476WNT7A-wingless-type MMTV integration site family member 7A3p25CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
152273FGD5ZFYVE23FYVE, RhoGEF and PH domain containing 53p25.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
55287TMEM40-transmembrane protein 403p25.2CV:PGCnp
GSMA_I
9922IQSEC1ARF-GEP100 | ARFGEP100 | BRAG2 | GEP100IQ motif and Sec7 domain 13p25.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
285368PRRT3-proline rich transmembrane protein 33p25.3DMG:Jaffe_2016
491ATP2B2PMCA2 | PMCA2a | PMCA2iATPase plasma membrane Ca2+ transporting 23p25.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7862BRPF1BR140bromodomain and PHD finger containing 13p26-p25CV:PGCnp
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
57633LRRN1FIGLER3 | NLRR-1leucine rich repeat neuronal 13p26.2CV:PGCnp
DMG:Jaffe_2016
152185SPICE1CCDC52 | SPICEspindle and centriole associated protein 13q13.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
8997KALRNARHGEF24 | CHD5 | CHDS5 | DUET | DUO | HAPIP | TRADkalirin, RhoGEF kinase3q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
57493HEG1HEG | MST112 | MSTP112heart development protein with EGF like domains 13q21.2CV:PGCnp
2624GATA2DCML | IMD21 | MONOMAC | NFE1BGATA binding protein 23q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
PMID:cooccur
10840ALDH1L110-FTHFDH | 10-fTHF | FDH | FTHFDaldehyde dehydrogenase 1 family member L13q21.3DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
55167MSL2MSL-2 | MSL2L1 | RNF184male-specific lethal 2 homolog (Drosophila)3q22.3CV:PGCnp
205428C3orf58DIA1 | GoPro49 | HASFchromosome 3 open reading frame 583q24CV:PGCnp
DMG:Nishioka_2013
4154MBNL1EXP | MBNLmuscleblind like splicing regulator 13q25CV:PGCnp
GO_Annotation
PMID:cooccur
79929MAP6D1MAPO6D1 | SL21MAP6 domain containing 13q27.1CV:PGCnp
DMG:Wockner_2014
CompositeSet
2049EPHB3ETK2 | HEK2 | TYRO6EPH receptor B33q27.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
3556IL1RAPC3orf13 | IL-1RAcP | IL1R3interleukin 1 receptor accessory protein3q28CV:PGCnp
Network
PMID:cooccur
2557GABRA4-gamma-aminobutyric acid type A receptor alpha4 subunit4p12CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
2580GAKDNAJ26 | DNAJC26cyclin G associated kinase4p16CV:PGCnpAscano FMRP targets
57533TBC1D14-TBC1 domain family member 144p16.1CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
4487MSX1ECTD3 | HOX7 | HYD1 | STHAG1msh homeobox 14p16.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
132884EVC2LBN | WADEvC ciliary complex subunit 24p16.2CV:PGCnp
DNM:Xu_2012
CompositeSet
3425IDUAIDA | MPS1iduronidase, alpha-L-4p16.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
2261FGFR3ACH | CD333 | CEK2 | HSFGFR3EX | JTK4fibroblast growth factor receptor 34p16.3CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
57732ZFYVE28LST2 | LYST2zinc finger FYVE-type containing 284p16.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4043LRPAP1A2MRAP | A2RAP | HBP44 | MRAP | MYP23 | RAP | alpha-2-MRAPLDL receptor related protein associated protein 14p16.3CV:PGCnp
PMID:cooccur
4299AFF1AF4 | MLLT2 | PBM1AF4/FMR2 family member 14q21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
9429ABCG2ABC15 | ABCP | BCRP | BCRP1 | BMDP | CD338 | CDw338 | EST157481 | GOUT1 | MRX | MXR | MXR-1 | MXR1 | UAQTL1ATP binding cassette subfamily G member 2 (Junior blood group)4q22CV:PGCnp
DMG:Jaffe_2016
4126MANBAMANB1mannosidase beta4q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
255743NPNTEGFL6L | POEMnephronectin4q24CV:GWASdb
CV:PGCnp
839CASP6MCH2caspase 64q25CV:PGCnp
Network
Ascano FMRP targets
132332TMEM155-transmembrane protein 1554q27CV:PGCnp
10252SPRY1hSPRY1sprouty RTK signaling antagonist 14q28.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
2549GAB1-GRB2 associated binding protein 14q31.21CV:PGCnp
79658ARHGAP10GRAF2 | PS-GAP | PSGAPRho GTPase activating protein 104q31.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
55751TMEM184CTMEM34transmembrane protein 184C4q31.23CV:GWASdb
CV:PGCnp
23321TRIM2CMT2R | RNF86tripartite motif containing 24q31.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
57600FNIP2FNIPL | MAPO1folliculin interacting protein 24q32.1CV:PGCnp
55314TMEM144-transmembrane protein 1444q32.1CV:PGCnp
DMG:Wockner_2014
Expression
1363CPECPHcarboxypeptidase E4q32.3CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
56977STOX2-storkhead box 24q35.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
8470SORBS2ARGBP2 | PRO0618sorbin and SH3 domain containing 24q35.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2690GHRGHBP | GHIPgrowth hormone receptor5p13-p12CV:PGCnp
PMID:cooccur
3977LIFRCD118 | LIF-R | SJS2 | STWS | SWSleukemia inhibitory factor receptor alpha5p13-p12PMID:cooccur
2668GDNFATF1 | ATF2 | HFB1-GDNF | HSCR3glial cell derived neurotrophic factor5p13.1-p12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
133584EGFLAMAGRINL | AGRNL | PIKAEGF like, fibronectin type III and laminin G domains5p13.2-p13.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4651MYO10-myosin X5p15.1CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
134147CMBLJS-1carboxymethylenebutenolidase homolog (Pseudomonas)5p15.2CV:PGCnp
DMG:Wockner_2014
134111UBE2QL1-ubiquitin conjugating enzyme E2 Q family like 15p15.31CV:GWASdb
CV:PGCnp
57688ZSWIM6AFNDzinc finger SWIM-type containing 65q12.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
115548FCHO2-FCH domain only 25q13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
4163MCCMCC1mutated in colorectal cancers5q21CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
1839HBEGFDTR | DTS | DTSF | HEGFLheparin binding EGF like growth factor5q23CV:PGCnp
GSMA_I
153241CEP120CCDC100 | SRTD13centrosomal protein 120kDa5q23.2CV:PGCnp
DNM:McCarthy_2014
115123MARCH3MARCH-III | RNF173membrane associated ring-CH-type finger 35q23.2CV:PGCnp
GSMA_I
4090SMAD5DWFC | JV5-1 | MADH5SMAD family member 55q31CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
2246FGF1AFGF | ECGF | ECGF-beta | ECGFA | ECGFB | FGF-1 | FGF-alpha | FGFA | GLIO703 | HBGF-1 | HBGF1fibroblast growth factor 15q31Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
NEUROTROPHIN SIGNALING
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
26223FBXL21FBL3B | FBXL3B | FBXL3P | Fbl21F-box and leucine-rich repeat protein 21 (gene/pseudogene)5q31CV:PGCnp
GSMA_I
PMID:cooccur
26249KLHL3PHA2Dkelch like family member 35q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
501ALDH7A1ATQ1 | EPD | PDEaldehyde dehydrogenase 7 family member A15q31CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
154ADRB2ADRB2R | ADRBR | B2AR | BAR | BETA2ARadrenoceptor beta 25q31-q32CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
GPCR SIGNALLING
1958EGR1AT225 | G0S30 | KROX-24 | NGFI-A | TIS8 | ZIF-268 | ZNF225early growth response 15q31.1CV:PGCnp
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
9597SMAD5-AS1DAMS | SMAD5AS | SMAD5OSSMAD5 antisense RNA 15q31.1CV:GWASdb
CV:PGCnp
3659IRF1IRF-1 | MARinterferon regulatory factor 15q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
202052DNAJC18-DnaJ heat shock protein family (Hsp40) member C185q31.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
26045LRRTM2-leucine rich repeat transmembrane neuronal 25q31.2CV:PGCnp
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
340061TMEM173ERIS | MITA | MPYS | NET23 | SAVI | STING | hMITA | hSTINGtransmembrane protein 1735q31.2CV:PGCnp
DMG:Montano_2016
GSMA_I
9542NRG2DON1 | HRG2 | NTAKneuregulin 25q31.2Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_WM
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
51523CXXC5CF5 | HSPC195 | RINF | WIDCXXC finger protein 55q31.2CV:PGCnp
GSMA_I
9421HAND1Hxt | Thing1 | bHLHa27 | eHandheart and neural crest derivatives expressed 15q33CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
84466MEGF10EMARDDmultiple EGF like domains 105q33Association
CV:PGCnp
DMG:Wockner_2014
GR_WM
GSMA_I
Network
PMID:cooccur
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
26999CYFIP2PIR121cytoplasmic FMR1 interacting protein 25q33.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8817FGF18FGF-18 | ZFGF5fibroblast growth factor 185q34Association
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
4488MSX2CRS2 | FPP | HOX8 | MSH | PFM | PFM1msh homeobox 25q35.2CV:PGCnp
GSMA_IIA
PMID:cooccur
643836ZFP62ZET | ZNF755ZFP62 zinc finger protein5q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
81786TRIM7GNIP | RNF90tripartite motif containing 75q35.3CV:PGCnp
DMG:Wockner_2014
9509ADAMTS2ADAM-TS2 | ADAMTS-2 | ADAMTS-3 | NPI | PC I-NP | PCI-NP | PCINP | PCPNI | PNPIADAM metallopeptidase with thrombospondin type 1 motif 25qterCV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
27232GNMTHEL-S-182mPglycine N-methyltransferase6p12GSMA_I
GSMA_IIE
PMID:cooccur
26036ZNF451COASTER | dJ417I1.1zinc finger protein 4516p12.1CV:PGCnp
DMG:vanEijk_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
53405CLIC5DFNB102 | DFNB103 | MST130 | MSTP130chloride intracellular channel 56p12.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
81578COL21A1COLA1L | FP633collagen type XXI alpha 16p12.3-p11.2|6p12.3-p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
5429POLHRAD30 | RAD30A | XP-V | XPVpolymerase (DNA) eta6p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
116113FOXP4hFKHLAforkhead box P46p21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIE
22875ENPP4NPP4ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)6p21.1CV:PGCnp
GSMA_IIE
54209TREM2TREM-2 | Trem2a | Trem2b | Trem2ctriggering receptor expressed on myeloid cells 26p21.1CV:PGCnp
DNM:Xu_2012
GSMA_I
GSMA_IIE
PMID:cooccur
CompositeSet
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
3109HLA-DMBD6S221E | RING7major histocompatibility complex, class II, DM beta6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
7726TRIM26AFP | RNF95 | ZNF173tripartite motif containing 266p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
30834ZNRD1HTEX-6 | HTEX6 | Rpa12 | TCTEX6 | TEX6 | ZR14 | hZR14 | tctex-6zinc ribbon domain containing 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
8969HIST1H2AGH2A.1b | H2A/p | H2AFP | H2AG | pH2A/fhistone cluster 1, H2ag6p22.1CV:PGCnp
DNM:Xu_2012
Expression
GSMA_I
CompositeSet
8339HIST1H2BGH2B.1A | H2B/a | H2BFA | dJ221C16.8histone cluster 1, H2bg6p22.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
29116MYLIPIDOL | MIRmyosin regulatory light chain interacting protein6p22.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
255488RNF144BIBRDC2 | PIR2 | bA528A10.3 | p53RFPring finger protein 144B6p22.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
3400ID4IDB4 | bHLHb27inhibitor of DNA binding 4, HLH protein6p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
2651GCNT2CCAT | CTRCT13 | GCNT2C | GCNT5 | IGNT | II | NACGT1 | NAGCT1 | ULG3 | bA360O19.2 | bA421M1.1glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)6p24.2CV:PGCnp
GSMA_I
PMID:cooccur
4739NEDD9CAS-L | CAS2 | CASL | CASS2 | HEF1neural precursor cell expressed, developmentally down-regulated 96p24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
2296FOXC1ARA | FKHL7 | FREAC-3 | FREAC3 | IGDA | IHG1 | IRID1 | RIEG3forkhead box C16p25CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
63027SLC22A23C6orf85solute carrier family 22 member 236p25.2CV:GWAScat
CV:PGCnp
DNM:Guipponi_2014
PMID:cooccur
2295FOXF2FKHL6 | FREAC-2 | FREAC2forkhead box F26p25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
4646MYO6DFNA22 | DFNB37myosin VI6q13CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
23033DOPEY1DOP1 | KIAA1117 | dJ202D23.2dopey family member 16q15CV:PGCnpCompositeSet
Darnell FMRP targets
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
11149BVESHBVES | LGMD2X | POP1 | POPDC1blood vessel epicardial substance6q21CV:PGCnp
DMG:Wockner_2014
2444FRKGTK | PTK5 | RAKfyn related Src family tyrosine kinase6q21-q22.3CV:PGCnp
DMG:Wockner_2014
4121MAN1A1HUMM3 | HUMM9 | MAN9mannosidase alpha class 1A member 16q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
221303FAM162BC6orf189 | bA86F4.2family with sequence similarity 162 member B6q22.1CV:GWASdb
CV:PGCnp
79632FAM184AC6orf60family with sequence similarity 184 member A6q22.31CV:PGCnp
9439MED23ARC130 | CRSP130 | CRSP133 | CRSP3 | DRIP130 | MRT18 | SUR-2 | SUR2mediator complex subunit 236q22.33-q24.1CV:PGCnp
DMG:Jaffe_2016
26002MOXD1MOX | PRO5780 | dJ248E1.1monooxygenase, DBH-like 16q23.2CV:PGCnp
DEG:Sanders_2013
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
57492ARID1B6A3-5 | BAF250B | BRIGHT | DAN15 | ELD/OSA1 | MRD12 | OSA2 | P250RAT-rich interaction domain 1B6q25.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
154043CNKSR3MAGI1CNKSR family member 36q25.2CV:PGCnp
DMG:Nishioka_2013
10846PDE10AHSPDE10Aphosphodiesterase 10A6q26CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
154664ABCA13-ATP binding cassette subfamily A member 137p12.3CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
107ADCY1AC1 | DFNB44adenylate cyclase 1 (brain)7p12.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
117ADCYAP1R1PAC1 | PAC1R | PACAPR | PACAPRIADCYAP receptor type I7p14CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
644150WIPF3CR16WAS/WASL interacting protein family member 37p14.3CV:PGCnp
DMG:Wockner_2014
816CAMK2BCAM2 | CAMK2 | CAMKBcalcium/calmodulin-dependent protein kinase II beta7p14.3-p14.1CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3207HOXA11HOX1 | HOX1I | RUSAT1homeobox A117p15.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9771RAPGEF5GFR | MR-GEF | REPACRap guanine nucleotide exchange factor 57p15.3CV:PGCnp
GO_Annotation
Ascano FMRP targets
113263GLCCI1FAM117C | GCTR | GIG18 | TSSN1glucocorticoid induced 17p21.3CV:PGCnp
DMG:Wockner_2014
8379MAD1L1MAD1 | PIG9 | TP53I9 | TXBP181MAD1 mitotic arrest deficient-like 1 (yeast)7p22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
7559ZNF12GIOT-3 | HZF11 | KOX3 | ZNF325zinc finger protein 127p22.1CV:PGCnp
Expression
26100WIPI2ATG18B | Atg21 | CGI-50 | WIPI-2WD repeat domain, phosphoinositide interacting 27p22.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
79034C7orf26-chromosome 7 open reading frame 267p22.1CV:PGCnp
79778MICALL2JRAB | MICAL-L2MICAL like 27p22.3CV:PGCnp
DMG:Wockner_2014
51608GET4C7orf20 | CEE | CGI-20 | TRC35golgi to ER traffic protein 47p22.3CV:PGCnp
DMG:Montano_2016
26053AUTS2FBRSL2 | MRD26autism susceptibility candidate 27q11.22CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
DNM:McCarthy_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
155382VPS37DWBSCR24VPS37D, ESCRT-I subunit7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
7462LAT2HSPC046 | LAB | NTAL | WBSCR15 | WBSCR5 | WSCR5linker for activation of T-cells family member 27q11.23CNV:YES
CV:PGCnp
GO_Annotation
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
10142AKAP9AKAP-9 | AKAP350 | AKAP450 | CG-NAP | HYPERION | LQT11 | MU-RMS-40.16A | PPP1R45 | PRKA9 | YOTIAOA-kinase anchoring protein 97q21-q22CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5243ABCB1ABC20 | CD243 | CLCS | GP170 | MDR1 | P-GP | PGY1ATP binding cassette subfamily B member 17q21.12Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
349152DPY19L2P2-DPY19L2 pseudogene 27q22.1CV:PGCnp
DMG:Jaffe_2016
2861GPR37EDNRBL | PAELR | hET(B)R-LPG protein-coupled receptor 377q31CV:PGCnp
DMG:Jaffe_2016
9732DOCK4-dedicator of cytokinesis 47q31.1CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
29969MDFICHICMyoD family inhibitor domain containing7q31.1-q31.2CV:PGCnp
PMID:cooccur
2918GRM8GLUR8 | GPRC1H | MGLUR8 | mGlu8glutamate receptor, metabotropic 87q31.3-q32.1Association
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
Potential synaptic genes
3663IRF5SLEB10interferon regulatory factor 57q32CV:PGCnp
PMID:cooccur
57670KIAA1549-KIAA15497q34CV:GWASdb
CV:PGCnp
Network
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
2020EN2-engrailed homeobox 27q36CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
27153ZNF777-zinc finger protein 7777q36.1CV:PGCnp
DMG:Jaffe_2016
57541ZNF398P51 | P71 | ZER6zinc finger protein 3987q36.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
155066ATP6V0E2ATP6V0E2L | C7orf32ATPase H+ transporting V0 subunit e27q36.1CV:PGCnp
DMG:Jaffe_2016
116988AGAP3AGAP-3 | CENTG3 | CRAG | MRIP-1 | cnt-g3ArfGAP with GTPase domain, ankyrin repeat and PH domain 37q36.1CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
136051ZNF786-zinc finger protein 7867q36.1CV:PGCnpAscano FMRP targets
286ANK1ANK | SPH1 | SPH2ankyrin 18p11.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Expression
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
2055CLN8C8orf61 | EPMRceroid-lipofuscinosis, neuronal 88p23CV:PGCnp
DMG:Wockner_2014
GO_Annotation
83648FAM167AC8orf13 | D8S265family with sequence similarity 167 member A8p23-p22CV:PGCnp
1672DEFB1BD1 | DEFB-1 | DEFB101 | HBD1defensin beta 18p23.1CV:GWASdb
CV:PGCnp
9258MFHAS1LRRC65 | MASL1malignant fibrous histiocytoma amplified sequence 18p23.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
51606ATP6V1HCGI-11 | MSTP042 | NBP1 | SFD | SFDalpha | SFDbeta | VMA13ATPase H+ transporting V1 subunit H8q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3574IL7IL-7interleukin 78q12-q13CV:GWASdb
CV:PGCnp
9760TOXTOX1thymocyte selection associated high mobility group box8q12.1CV:GWASdb
CV:PGCnp
PMID:cooccur
56704JPH1CMT2K | JP-1 | JP1junctophilin 18q21CV:PGCnp
157680VPS13BCHS1 | COH1vacuolar protein sorting 13 homolog B (yeast)8q22.2CV:PGCnp
DMG:Jaffe_2016
115908CTHRC1-collagen triple helix repeat containing 18q22.3CV:PGCnp
284ANGPT1AGP1 | AGPT | ANG1angiopoietin 18q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
8581LY6DE48 | Ly-6Dlymphocyte antigen 6 complex, locus D8q24CV:PGCnp
66004LYNX1SLURP2Ly6/neurotoxin 18q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
340371NRBP2TRG16 | pp9320nuclear receptor binding protein 28q24.3CV:PGCnp
DMG:Jaffe_2016
83481EPPK1EPIPL | EPIPL1epiplakin 18q24.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
169044COL22A1-collagen type XXII alpha 18q24.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
23237ARCArg3.1activity-regulated cytoskeleton-associated protein8q24.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
79937CNTNAP3CASPR3 | CNTNAP3Acontactin associated protein-like 39p13.1CV:PGCnp
GO_Annotation
PMID:cooccur
152007GLIPR2C9orf19 | GAPR-1 | GAPR1GLI pathogenesis-related 29p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
57462KIAA1161NET37KIAA11619p13.3CV:PGCnp
DEG:Zhao_2015
286319TUSC1TSG-9 | TSG9tumor suppressor candidate 19p21.2CV:GWASdb
CV:PGCnp
2731GLDCGCE | GCSP | HYGN1glycine dehydrogenase (decarboxylating)9p22CV:GWASdb
CV:PGCnp
123PLIN2ADFP | ADRPperilipin 29p22.1CV:PGCnp
PMID:cooccur
81704DOCK8HEL-205 | MRD2 | ZIR8dedicator of cytokinesis 89p24.3CV:PGCnp
157983C9orf66-chromosome 9 open reading frame 669p24.3CV:PGCnp
9630GNA14-G protein subunit alpha 149q21CV:PGCnp
DMG:Jaffe_2016
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
1306COL15A1-collagen type XV alpha 19q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
140803TRPM6CHAK2 | HMGX | HOMG | HOMG1 | HSHtransient receptor potential cation channel subfamily M member 69q21.13CV:PGCnp
257019FRMD34.1O | EPB41L4O | EPB41LO | P410FERM domain containing 39q21.32CV:GWASdb
CV:PGCnp
9568GABBR2GABABR2 | GPR51 | GPRC3B | HG20 | HRIHFB2099gamma-aminobutyric acid type B receptor subunit 29q22.1-q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10507SEMA4DC9orf164 | CD100 | M-sema-G | SEMAJ | coll-4semaphorin 4D9q22.2CV:PGCnp
GO_Annotation
PMID:cooccur
79695GALNT12CRCS1 | GalNAc-T12polypeptide N-acetylgalactosaminyltransferase 129q22.33CV:PGCnp
DMG:Wockner_2014
54566EPB41L4BCG1 | EHM2erythrocyte membrane protein band 4.1 like 4B9q31-q32CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
19ABCA1ABC-1 | ABC1 | CERP | HDLDT1 | TGDATP binding cassette subfamily A member 19q31.1CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
85301COL27A1STLScollagen type XXVII alpha 19q32CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
25861DFNB31CIP98 | PDZD7B | USH2D | WHRN | WIdeafness, autosomal recessive 319q32CV:GWASdb
CV:PGCnp
GO_Annotation
153090DAB2IPAF9Q34 | AIP-1 | AIP1 | DIP1/2DAB2 interacting protein9q33.1-q33.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
26468LHX6LHX6.1LIM homeobox 69q33.2DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
403341ZBTB34ZNF918zinc finger and BTB domain containing 349q33.3CV:PGCnp
954ENTPD2CD39L1 | NTPDase-2ectonucleoside triphosphate diphosphohydrolase 29q34PMID:cooccur
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
84895FAM73BC9orf54family with sequence similarity 73 member B9q34.11CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
64794DDX31PPP1R25DEAD-box helicase 319q34.13CV:GWASdb
CV:PGCnp
Ascano FMRP targets
84726PRRC2BBAT2L | BAT2L1 | KIAA0515 | LQFBS-1proline rich coiled-coil 2B9q34.13CV:GWASdb
CV:PGCnp
DNM:Guipponi_2014
1056CELBAL | BSDL | BSSL | CELL | CEase | FAP | FAPP | LIPA | MODY8carboxyl ester lipase9q34.3CV:PGCnp
PMID:cooccur
56623INPP5ECORS1 | CPD4 | JBTS1 | MORMS | PPI5PIVinositol polyphosphate-5-phosphatase E9q34.3CV:PGCnp
DMG:Jaffe_2016
170302ARXCT121 | EIEE1 | ISSX | MRX29 | MRX32 | MRX33 | MRX36 | MRX38 | MRX43 | MRX54 | MRX76 | MRX87 | MRXS1 | PRTSaristaless related homeoboxXp21.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
25878MXRA5-matrix-remodelling associated 5Xp22.33CV:GWASdb
CV:PGCnp
203447NRKNESKNik related kinaseXq22.3CV:PGCnp
Expression
PMID:cooccur
51114ZDHHC9CGI89 | CXorf11 | DHHC9 | MMSA1 | MRXSZ | ZDHHC10 | ZNF379 | ZNF380zinc finger DHHC-type containing 9Xq26.1CV:PGCnp
PMID:cooccur
2258FGF13FGF-13 | FGF2 | FHF-2 | FHF2fibroblast growth factor 13Xq26.3CV:PGCnp
DEG:Zhao_2015
GO_Annotation
Potential synaptic genes
4168MCF2ARHGEF21 | DBLMCF.2 cell line derived transforming sequenceXq27CV:PGCnp
PMID:cooccur
Potential synaptic genes
215ABCD1ABC42 | ALD | ALDP | AMNATP binding cassette subfamily D member 1Xq28CV:GWAScat
CV:GWASdb
CV:PGCnp
10838ZNF275-zinc finger protein 275Xq28CV:PGCnp
DMG:vanEijk_2014
2157F8AHF | DXS1253E | F8B | F8C | FVIII | HEMAcoagulation factor VIIIXq28CV:PGCnp
PMID:cooccur