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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: NRK

Summary

GeneID

203447

Symbol

NRK

Synonyms

DKFZp686A17109|FLJ16788|MGC131849|NESK

Description

Nik related kinase

See related

HGNC:25391|HPRD:14841|

Locus tag

RP1-82J11.1

Gene type

protein-coding

Map location

Xq22.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Expression

P value: 1.79

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000166

nucleotide binding

IEA

GO:0003700

transcription factor activity

IEA

GO:0005083

small GTPase regulator activity

IEA

GO:0005524

ATP binding

IEA

GO:0004674

protein serine/threonine kinase activity

IEA

GO:0016740

transferase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006468

protein amino acid phosphorylation

IEA

GO:0007256

activation of JNKK activity

IEA

GO:0045449

regulation of transcription

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
PID_TNF_PATHWAY	46	33	All SZGR genes in this pathway
MCBRYAN_PUBERTAL_BREAST_4_5WK_DN	196	131	All SZGR genes in this pathway
PEREZ_TP53_TARGETS	1174	695	All SZGR genes in this pathway
MARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN	514	319	All SZGR genes in this pathway
SHETH_LIVER_CANCER_VS_TXNIP_LOSS_PAM5	94	59	All SZGR genes in this pathway
BENPORATH_SUZ12_TARGETS	1038	678	All SZGR genes in this pathway
KYNG_DNA_DAMAGE_BY_GAMMA_RADIATION	81	59	All SZGR genes in this pathway
KYNG_DNA_DAMAGE_UP	226	164	All SZGR genes in this pathway
FINETTI_BREAST_CANCERS_KINOME_BLUE	21	16	All SZGR genes in this pathway
RIGGI_EWING_SARCOMA_PROGENITOR_UP	430	288	All SZGR genes in this pathway
LABBE_WNT3A_TARGETS_DN	97	53	All SZGR genes in this pathway
MEISSNER_BRAIN_HCP_WITH_H3_UNMETHYLATED	37	21	All SZGR genes in this pathway
MEISSNER_NPC_HCP_WITH_H3K4ME2	491	319	All SZGR genes in this pathway
WONG_ADULT_TISSUE_STEM_MODULE	721	492	All SZGR genes in this pathway
PILON_KLF1_TARGETS_UP	504	321	All SZGR genes in this pathway
KATSANOU_ELAVL1_TARGETS_UP	169	105	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	1325	1331	1A	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-101	776	783	1A,m8	hsa-miR-101	UACAGUACUGUGAUAACUGAAG
miR-128	247	253	1A	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
				hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
				hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
				hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-136	1798	1804	m8	hsa-miR-136	ACUCCAUUUGUUUUGAUGAUGGA
miR-139	778	785	1A,m8	hsa-miR-139^brain	UCUACAGUGCACGUGUCU
miR-144	777	783	1A	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-19	221	228	1A,m8	hsa-miR-19a	UGUGCAAAUCUAUGCAAAACUGA
miR-19	221	228	1A,m8	hsa-miR-19b	UGUGCAAAUCCAUGCAAAACUGA
miR-196	1396	1402	m8	hsa-miR-196a	UAGGUAGUUUCAUGUUGUUGG
miR-196	1396	1402	m8	hsa-miR-196b	UAGGUAGUUUCCUGUUGUUGG
miR-221/222	129	136	1A,m8	hsa-miR-221^brain	AGCUACAUUGUCUGCUGGGUUUC
miR-221/222	129	136	1A,m8	hsa-miR-222^brain	AGCUACAUCUGGCUACUGGGUCUC
miR-23	1609	1615	m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	1609	1615	m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-27	1596	1602	m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
				hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
				hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
				hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-30-5p	1640	1647	1A,m8	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-320	160	167	1A,m8	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-323	1608	1615	1A,m8	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-377	1433	1439	m8	hsa-miR-377	AUCACACAAAGGCAACUUUUGU
miR-486	751	757	1A	hsa-miR-486	UCCUGUACUGAGCUGCCCCGAG
miR-493-5p	209	215	1A	hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
miR-495	241	247	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.