Search results: The pahtway p4553 has 169 genes in the original annotation. Currently, there are 105 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
6623SNCGBCSG1 | SRsynuclein gamma10q23.2-q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
27063ANKRD1ALRP | C-193 | CARP | CVARP | MCARP | bA320F15.2ankyrin repeat domain 110q23.31CV:PGCnp
PMID:cooccur
355FASALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6Fas cell surface death receptor10q24.1CV:PGCnp
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
387758FIBIN-fin bud initiation factor homolog (zebrafish)11p14.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
710SERPING1C1IN | C1INH | C1NH | HAE1 | HAE2serpin peptidase inhibitor, clade G (C1 inhibitor), member 111q12.1CV:PGCnp
Expression
81544GDPD5GDE2 | PP1665glycerophosphodiester phosphodiesterase domain containing 511q13.4-q13.5CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
54843SYTL2CHR11SYT | EXO4 | PPP1R151 | SGA72M | SLP2 | SLP2Asynaptotagmin like 211q14CV:PGCnp
DEG:Zhao_2015
GO_Annotation
EXOCYTOSIS
53826FXYD6-FXYD domain containing ion transport regulator 611q23.3Association
CV:PGCnp
DMG:Wockner_2014
GR_WM
GSMA_I
PMID:cooccur
83857TMTC1ARG99 | OLF | TMTC1Atransmembrane and tetratricopeptide repeat containing 112p11.22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
8092ALX1CART1 | FND3 | HEL23ALX homeobox 112q21.31CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1848DUSP6HH19 | MKP3 | PYST1dual specificity phosphatase 612q21.33CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
59277NTN4PRO3091netrin 412q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
3479IGF1IGF-I | IGFI | MGFinsulin like growth factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
84650EBPLEBRPemopamil binding protein like13q12-q13CV:GWASdb
CV:PGCnp
2098ESDFGHesterase D13q14.1-q14.2Association
CV:PGCnp
PMID:cooccur
9056SLC7A7LAT3 | LPI | MOP-2 | Y+LAT1 | y+LAT-1solute carrier family 7 member 714q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
283635FAM177A1C14orf24family with sequence similarity 177 member A114q13.2CV:PGCnp
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
2628GATMAGAT | AT | CCDS3glycine amidinotransferase15q21.1DMG:Wockner_2014
1512CTSHACC-4 | ACC-5 | ACC4 | ACC5 | CPSBcathepsin H15q25.1CV:PGCnp
220ALDH1A3ALDH1A6 | ALDH6 | MCOP8 | RALDH3aldehyde dehydrogenase 1 family member A315q26.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4629MYH11AAT4 | FAA4 | SMHC | SMMHCmyosin, heavy chain 11, smooth muscle16p13.11CNV:YES
CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
90861HN1LC16orf34 | L11hematological and neurological expressed 1-like16p13.3CV:PGCnp
DMG:Wockner_2014
4313MMP2CLG4 | CLG4A | MMP-2 | MMP-II | MONA | TBE-1matrix metallopeptidase 216q12.2CV:PGCnp
Network
PMID:cooccur
2294FOXF1ACDMPV | FKHL5 | FREAC1forkhead box F116q24DMG:Jaffe_2016
359845FAM101BCFM1family with sequence similarity 101 member B17p13CV:GWASdb
CV:PGCnp
3219HOXB9HOX-2.5 | HOX2 | HOX2Ehomeobox B917q21.3CV:PGCnp
DMG:Wockner_2014
Expression
3675ITGA3CD49C | FRP-2 | GAP-B3 | GAPB3 | ILNEB | MSK18 | VCA-2 | VL3A | VLA3aintegrin subunit alpha 317q21.33CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
103910MYL12BMLC-B | MRLC2myosin light chain 12B18p11.31CV:GWASdb
CV:PGCnp
Potential synaptic genes
80323CCDC68SE57-1coiled-coil domain containing 6818q21CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
PMID:cooccur
54858PGPEP1PAP-I | PGP | PGP-I | PGPI | Pcppyroglutamyl-peptidase I19p13.11CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
4854NOTCH3CADASIL | CADASIL1 | CASIL | IMF2 | LMNSnotch 319p13.12CV:PGCnp
GO_Annotation
PMID:cooccur
81794ADAMTS10ADAM-TS10 | ADAMTS-10 | WMS | WMS1ADAM metallopeptidase with thrombospondin type 1 motif 1019p13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
94274PPP1R14ACPI-17 | CPI17 | PPP1INLprotein phosphatase 1 regulatory inhibitor subunit 14A19q13.1CV:PGCnp
DMG:Wockner_2014
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
1760DMPKDM | DM1 | DM1PK | DMK | MDPK | MT-PKdystrophia myotonica protein kinase19q13.3CV:PGCnp
PMID:cooccur
388552BLOC1S3BLOS3 | HPS8 | RPbiogenesis of lysosomal organelles complex 1 subunit 319q13.32Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6272SORT1Gp95 | LDLCQ6 | NT3 | NTR3sortilin 11p13.3|1p21.3-p13.1DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
1301COL11A1CO11A1 | COLL6 | STL2collagen type XI alpha 11p21CV:GWASdb
CV:PGCnp
10561IFI44MTAP44 | TLDC5 | p44interferon induced protein 441p31.1CV:PGCnp
GSMA_IIA
1647GADD45ADDIT1 | GADD45growth arrest and DNA damage inducible alpha1p31.2CV:GWASdb
CV:PGCnp
GSMA_IIA
7805LAPTM5CLAST6lysosomal protein transmembrane 51p34CV:PGCnp
2810SFNYWHASstratifin1p36.11CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
712C1QA-complement component 1, q subcomponent, A chain1p36.12CV:PGCnp
PMID:cooccur
713C1QB-complement component 1, q subcomponent, B chain1p36.12CV:PGCnp
PMID:cooccur
80176SPSB1SSB-1 | SSB1splA/ryanodine receptor domain and SOCS box containing 11p36.22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
8490RGS5MST092 | MST106 | MST129 | MSTP032 | MSTP092 | MSTP106 | MSTP129regulator of G-protein signaling 51q23.1CV:PGCnp
GSMA_IIA
Network
PMID:cooccur
10763NESNbla00170nestin1q23.1CV:PGCnp
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
25903OLFML2B-olfactomedin like 2B1q23.3CV:GWASdb
CV:PGCnp
GSMA_IIA
92235DUSP27-dual specificity phosphatase 27 (putative)1q24.1CV:PGCnp
DMG:Wockner_2014
60676PAPPA2PAPP-A2 | PAPP-E | PAPPE | PLAC3pappalysin 21q25.2CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
23046KIF21B-kinesin family member 21B1q32.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3911LAMA5-laminin subunit alpha 520q13.2-q13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
11096ADAMTS5ADAM-TS 11 | ADAM-TS 5 | ADAM-TS5 | ADAMTS-11 | ADAMTS-5 | ADAMTS11 | ADMP-2ADAM metallopeptidase with thrombospondin type 1 motif 521q21.3CV:PGCnp
DMG:Jaffe_2016
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
25830SULT4A1BR-STL-1 | BRSTL1 | DJ388M5.3 | NST | SULTX3 | hBR-STL-1sulfotransferase family 4A member 122q13.2Association
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
10478SLC25A17PMP34solute carrier family 25 member 1722q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
84693MCEEGLOD2methylmalonyl-CoA epimerase2p13.3CV:PGCnp
130271PLEKHH2PLEKHH1Lpleckstrin homology, MyTH4 and FERM domain containing H22p21CV:PGCnp
DNM:McCarthy_2014
84696ABHD1LABH1abhydrolase domain containing 12p23.3CV:PGCnp
91526ANKRD44PP6-ARS-Bankyrin repeat domain 442q33.1CV:GWASdb
CV:PGCnp
DNM:Guipponi_2014
3485IGFBP2IBP2 | IGF-BP53insulin like growth factor binding protein 22q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
2043EPHA4HEK8 | SEK | TYRO1EPH receptor A42q36.1CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
92737DNERUNQ26 | betdelta/notch like EGF repeat containing2q36.3CV:PGCnp
GO_Annotation
PMID:cooccur
377007KLHL30-kelch like family member 302q37.3CV:PGCnp
7134TNNC1CMD1Z | CMH13 | TN-C | TNC | TNNCtroponin C1, slow skeletal and cardiac type3p21.1ADT:Sun_2012
CV:PGCnp
LK:YES
5915RARBHAP | MCOPS12 | NR1B2 | RRB2retinoic acid receptor beta3p24.2CV:GWASdb
CV:PGCnp
GSMA_I
57205ATP10DATPVDATPase phospholipid transporting 10D (putative)4p12CV:GWASdb
CV:PGCnp
10417SPON2DIL-1 | DIL1 | M-SPONDIN | MINDINspondin 24p16.3CV:PGCnp
GO_Annotation
51705EMCNEMCN2 | MUC14endomucin4q24CV:GWASdb
CV:PGCnp
5308PITX2ARP1 | Brx1 | IDG2 | IGDS | IGDS2 | IHG2 | IRID2 | Otlx2 | PTX2 | RGS | RIEG | RIEG1 | RSpaired like homeodomain 24q25CV:PGCnp
PMID:cooccur
401152C4orf3-chromosome 4 open reading frame 34q26CV:PGCnp
DMG:Wockner_2014
175AGAAGU | ASRG | GAaspartylglucosaminidase4q34.3CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
1008CDH10-cadherin 105p14.2CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
134147CMBLJS-1carboxymethylenebutenolidase homolog (Pseudomonas)5p15.2CV:PGCnp
DMG:Wockner_2014
2878GPX3GPx-P | GSHPx-3 | GSHPx-Pglutathione peroxidase 35q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
3779KCNMB1BKbeta1 | K(VCA)beta | SLO-BETA | hbeta1 | hslo-beta | k(VCA)beta-1 | slo-beta-1potassium calcium-activated channel subfamily M regulatory beta subunit 15q34GO_Annotation
GSMA_IIA
PMID:cooccur
EXCITABILITY
4794NFKBIEIKBENFKB inhibitor epsilon6p21.1CV:PGCnp
GSMA_IIE
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
222663SCUBE3CEGF3signal peptide, CUB domain and EGF like domain containing 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
23564DDAH2DDAH | DDAHII | G6a | HEL-S-277 | NG30dimethylarginine dimethylaminohydrolase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
1832DSPDCWHKTA | DPdesmoplakin6p24CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
2296FOXC1ARA | FKHL7 | FREAC-3 | FREAC3 | IGDA | IHG1 | IRID1 | RIEG3forkhead box C16p25CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
167681PRSS35C6orf158 | dJ223E3.1protease, serine 356q14.2CV:PGCnp
GO_Annotation
PMID:cooccur
2045EPHA7EHK-3 | EHK3 | EK11 | HEK11EPH receptor A76q16.1CV:GWASdb
CV:PGCnp
3482IGF2RCD222 | CI-M6PR | CIMPR | M6P-R | M6P/IGF2R | MPR 300 | MPR1 | MPR300 | MPRIinsulin like growth factor 2 receptor6q26CV:PGCnp
DMG:Montano_2016
PMID:cooccur
Ascano FMRP targets
4232MESTPEG1mesoderm specific transcript7q32CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Ambalavanan_2016
PMID:cooccur
28996HIPK2PRO0593homeodomain interacting protein kinase 27q34CV:PGCnpCompositeSet
Darnell FMRP targets
59339PLEKHA2TAPP2pleckstrin homology domain containing A28p11.22CV:PGCnp
DMG:Jaffe_2016
8323FZD6FZ-6 | FZ6 | HFZ6 | NDNC10frizzled class receptor 68q22.3-q23.1CV:GWASdb
CV:PGCnp
216ALDH1A1ALDC | ALDH-E1 | ALDH1 | ALDH11 | HEL-9 | HEL-S-53e | HEL12 | PUMB1 | RALDH1aldehyde dehydrogenase 1 family member A19q21.13CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1612DAPK1DAPKdeath-associated protein kinase 19q21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DNM:McCarthy_2014
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2040STOMBND7 | EPB7 | EPB72stomatin9q34.1CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2022ENGEND | HHT1 | ORW1endoglin9q34.11CV:PGCnp
PMID:cooccur
83543AIF1LC9orf58 | IBA2allograft inflammatory factor 1-like9q34.13-q34.3CV:PGCnp
138162C9orf116PIERCE1 | RbEST47chromosome 9 open reading frame 1169q34.3CV:PGCnp
1536CYBBAMCBX2 | CGD | GP91-1 | GP91-PHOX | GP91PHOX | IMD34 | NOX2 | p91-PHOXcytochrome b-245, beta polypeptideXp21.1CV:PGCnp
DEG:Sanders_2013
6303SAT1DC21 | KFSD | KFSDX | SAT | SSAT | SSAT-1spermidine/spermine N1-acetyltransferase 1Xp22.1CV:PGCnp
PMID:cooccur
Potential synaptic genes
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
203447NRKNESKNik related kinaseXq22.3CV:PGCnp
Expression
PMID:cooccur
5973RENBPRBP | RNBPrenin binding proteinXq28CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur