Search results: The pahtway p4079 has 491 genes in the original annotation. Currently, there are 319 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

Because the gene page contains a lot of information, it takes on average 3-5 seconds to load. So when you click a gene ID, please be patient for the page to load.

Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
2572GAD2GAD65glutamate decarboxylase 210p11.23CV:PGCnp
GO_Annotation
Network
PMID:cooccur
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
9806SPOCK2testican-2sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 210pter-q25.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
220963SLC16A9C10orf36 | MCT9solute carrier family 16 member 910q21.2CV:GWASdb
CV:PGCnp
CV:PheWAS
219738C10orf35-chromosome 10 open reading frame 3510q22.1CV:GWASdb
CV:PGCnp
CompositeSet
10718NRG3HRG3 | pro-NRG3neuregulin 310q23.1Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
NEUROTROPHIN SIGNALING
3257HPS1BLOC3S1 | HPSHPS1, biogenesis of lysosomal organelles complex 3 subunit 110q23.1-q23.3CV:PGCnp
PMID:cooccur
5950RBP4MCOPCB10 | RDCCASretinol binding protein 410q23.33CV:PGCnp
PMID:cooccur
7093TLL2-tolloid like 210q24.1CV:PGCnp
118788PIK3AP1BCAPphosphoinositide-3-kinase adaptor protein 110q24.1CV:PGCnp
PMID:cooccur
79803HPS6BLOC2S3HPS6, biogenesis of lysosomal organelles complex 2 subunit 310q24.32CV:PGCnpAscano FMRP targets
5791PTPREHPTPE | PTPE | R-PTP-EPSILONprotein tyrosine phosphatase, receptor type E10q26CV:PGCnp
GSMA_IIA
PMID:cooccur
84504NKX6-2GTX | NKX6.2 | NKX6BNK6 homeobox 210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
10570DPYSL4CRMP3 | DRP-4 | ULIP4dihydropyrimidinase like 410q26CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
119587CPXM2CPX2 | UNQ676carboxypeptidase X (M14 family), member 210q26.13CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
256536TCERG1L-transcription elongation regulator 1 like10q26.3CV:GWASdb
CV:PGCnp
GSMA_IIA
9479MAPK8IP1IB1 | JIP-1 | JIP1 | PRKM8IPmitogen-activated protein kinase 8 interacting protein 111p11.2CV:PGCnp
DMG:Nishioka_2013
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
57586SYT13-synaptotagmin 1311p11.2CV:PGCnp
60529ALX4CRS5 | FND2ALX homeobox 411p11.2CV:PGCnp
90993CREB3L1OASIScAMP responsive element binding protein 3-like 111p11.2CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
56675NRIP3C11orf14 | NY-SAR-105nuclear receptor interacting protein 311p15.3CV:PGCnp
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
1815DRD4D4DRdopamine receptor D411p15.5ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
9024BRSK2C11orf7 | PEN11B | SAD1 | SADA | STK29BR serine/threonine kinase 211p15.5CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
65998C11orf95-chromosome 11 open reading frame 9511q13CV:PGCnp
57124CD248CD164L1 | TEM1CD248 molecule11q13CV:PGCnp
DMG:Wockner_2014
7351UCP2BMIQ4 | SLC25A8 | UCPHuncoupling protein 2 (mitochondrial, proton carrier)11q13Association
CV:PGCnp
GO_Annotation
PMID:cooccur
8722CTSFCATSF | CLN13cathepsin F11q13CV:PGCnp
254122SNX32SNX6Bsorting nexin 3211q13.1CV:PGCnp
DMG:Wockner_2014
254263CNIH2CNIH-2 | Cnilcornichon family AMPA receptor auxiliary protein 211q13.2DMG:Wockner_2014
2249FGF4HBGF-4 | HST | HST-1 | HSTF1 | K-FGF | KFGFfibroblast growth factor 411q13.3CV:PGCnp
DMG:Wockner_2014
2900GRIK4EAA1 | GRIK | GluK4 | KA1glutamate ionotropic receptor kainate type subunit 411q22.3Association
Core
CV:PGCnp
GO_Annotation
GR_WM
GSMA_I
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
9099USP2UBP41 | USP9ubiquitin specific peptidase 211q23.3CV:PGCnp
GSMA_I
PMID:cooccur
219855SLC37A2pp11662solute carrier family 37 member 211q24.2CV:PGCnp
3764KCNJ8KIR6.1 | uKATP-1potassium voltage-gated channel subfamily J member 812p11.23CV:PGCnp
DMG:vanEijk_2014
Expression
EXCITABILITY
654429LRTM2-leucine-rich repeats and transmembrane domains 212p13.33CV:PGCnp
DMG:Wockner_2014
1280COL2A1ANFH | AOM | COL11A3 | SEDC | STL1collagen type II alpha 112q13.11CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
552AVPR1AAVPR V1a | AVPR1 | V1aRarginine vasopressin receptor 1A12q14.2CV:PGCnp
PMID:cooccur
5787PTPRBHPTP-BETA | HPTPB | PTPB | R-PTP-BETA | VEPTPprotein tyrosine phosphatase, receptor type B12q15CV:GWASdb
CV:PGCnp
8437RASAL1RASALRAS protein activator like 112q23-q24CV:GWASdb
CV:PGCnp
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
59341TRPV4BCYM3 | CMT2C | HMSN2C | OTRPC4 | SMAL | SPSMA | SSQTL1 | TRP12 | VRL2 | VROACtransient receptor potential cation channel subfamily V member 412q24.1CV:PGCnp
Network
1840DTX1hDx-1deltex 112q24.13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GO_Annotation
CompositeSet
Darnell FMRP targets
84530SRRM4KIAA1853 | MU-MB-2.76 | nSR100serine/arginine repetitive matrix 412q24.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
54509RHOFARHF | RIFras homolog family member F (in filopodia)12q24.31CV:PGCnp
DMG:Wockner_2014
121256TMEM132DMOLT | PPP1R153transmembrane protein 132D12q24.33CV:GWAScat
CV:GWASdb
CV:PGCnp
4093SMAD9MADH6 | MADH9 | PPH2 | SMAD8 | SMAD8/9 | SMAD8A | SMAD8BSMAD family member 913q12-q14GO_Annotation
Network
23281MTUS2CAZIP | ICIS | KIAA0774 | TIP150microtubule associated tumor suppressor candidate 213q12.3CV:PGCnp
DMG:Wockner_2014
8600TNFSF11CD254 | ODF | OPGL | OPTB2 | RANKL | TNLG6B | TRANCE | hRANKL2 | sOdftumor necrosis factor superfamily member 1113q14CV:PGCnp
DMG:Wockner_2014
Network
160857CCDC122-coiled-coil domain containing 12213q14.11CV:PGCnp
220107DLEU7-deleted in lymphocytic leukemia, 713q14.3CV:GWASdb
CV:PGCnp
6252RTN1NSPreticulon 114q23.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6547SLC8A3NCX3solute carrier family 8 member A314q24.1CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
145482PTGR2HEL-S-298 | PGR2 | ZADH1prostaglandin reductase 214q24.3CV:PGCnp
DMG:Wockner_2014
5228PGFD12S1900 | PGFL | PLGF | PlGF-2 | SHGC-10760placental growth factor14q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
145258GSCSAMSgoosecoid homeobox14q32.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10858CYP46A1CP46 | CYP46cytochrome P450 family 46 subfamily A member 114q32.1CV:PGCnp
GO_Annotation
PMID:cooccur
145270PRIMA1PRIMAproline rich membrane anchor 114q32.12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
123036TC2NC14orf47 | C2CD1 | MTAC2D1 | Tac2-Ntandem C2 domains, nuclear14q32.12CV:GWASdb
CV:PGCnp
161725OTUD7AC15orf16 | C16ORF15 | CEZANNE2 | OTUD7OTU deubiquitinase 7A15q13.3CNV:YES
CV:PGCnp
Ascano FMRP targets
10125RASGRP1CALDAG-GEFI | CALDAG-GEFII | RASGRP | V | hRasGRP1RAS guanyl releasing protein 115q14CV:GWASdb
CV:PGCnp
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
1139CHRNA7CHRNA7-2 | NACHRA7cholinergic receptor nicotinic alpha 7 subunit15q14Association
CNV:YES
Core
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
4058LTKTYK1leukocyte receptor tyrosine kinase15q15.1-q21.1GO_Annotation
PMID:cooccur
388121TNFAIP8L3TIPE3TNF alpha induced protein 8 like 315q21.2CV:PGCnp
4828NMB-neuromedin B15q22-qterCV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
302ANXA2ANX2 | ANX2L4 | CAL1H | HEL-S-270 | LIP2 | LPC2 | LPC2D | P36 | PAP-IVannexin A215q22.2CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
79856SNX22-sorting nexin 2215q22.31CV:PGCnp
DMG:Wockner_2014
Expression
23604DAPK2DRP-1 | DRP1death-associated protein kinase 215q22.31CV:PGCnp
Network
53346TM6SF1-transmembrane 6 superfamily member 115q24-q26CV:PGCnp
220ALDH1A3ALDH1A6 | ALDH6 | MCOP8 | RALDH3aldehyde dehydrogenase 1 family member A315q26.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8448DOC2ADoc2double C2-like domains, alpha16p11.2CNV:YES
CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
EXOCYTOSIS
G2Cdb.humanPSP
Potential synaptic genes
2013EMP2XMPepithelial membrane protein 216p13.2CV:PGCnp
DMG:Montano_2016
54715RBFOX12BP1 | A2BP1 | FOX-1 | FOX1 | HRNBP1RNA binding protein, fox-1 homolog (C. elegans) 116p13.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
Potential synaptic genes
4350MPGAAG | ADPG | APNG | CRA36.1 | MDG | Mid1 | PIG11 | PIG16 | anpgN-methylpurine DNA glycosylase16p13.3DNM:Fromer_2014
PMID:cooccur
CompositeSet
79190IRX6IRX-3 | IRX7 | IRXB3iroquois homeobox 616q12.2CV:PGCnp
DMG:Wockner_2014
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
79918SETD6-SET domain containing 616q21CV:PGCnp
DMG:Jaffe_2016
3291HSD11B2AME | AME1 | HSD11K | HSD2 | SDR9C3hydroxysteroid (11-beta) dehydrogenase 216q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
6236RRADRAD | RAD1 | REM3Ras-related associated with diabetes16q22CV:PGCnp
Network
794CALB2CAB29 | CAL2 | CRcalbindin 216q22.2CV:PGCnpG2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
170692ADAMTS18ADAMTS21 | KNO2 | MMCATADAM metallopeptidase with thrombospondin type 1 motif 1816q23CV:PGCnp
DNM:Gulsuner_2013
79152FA2HFAAH | FAH1 | FAXDC1 | SCS7 | SPG35fatty acid 2-hydroxylase16q23CV:GWASdb
CV:PGCnp
PMID:cooccur
197259MLKLhMLKLmixed lineage kinase domain-like16q23.1CV:PGCnp
DMG:Wockner_2014
54550NECAB2EFCBP2N-terminal EF-hand calcium binding protein 216q23.3CV:PGCnp
DMG:Wockner_2014
404550C16orf74-chromosome 16 open reading frame 7416q24.1CV:PGCnp
DMG:Wockner_2014
3394IRF8H-ICSBP | ICSBP | ICSBP1 | IMD32A | IMD32B | IRF-8interferon regulatory factor 816q24.1CV:PGCnp
10743RAI1SMCR | SMSretinoic acid induced 117p11.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9955HS3ST3A13-OST-3A | 3OST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A117p12CV:GWASdb
CV:PGCnp
6517SLC2A4GLUT4solute carrier family 2 member 417p13CV:PGCnp
51087YBX2CONTRIN | CSDA3 | DBPC | MSY2Y-box binding protein 217p13.1CV:PGCnp
5338PLD2-phospholipase D217p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
29ABRMDBactive BCR-related17p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
4641MYO1CMMI-beta | MMIb | NMI | myr2myosin IC17p13.3CV:PGCnpAscano FMRP targets
3090HIC1ZBTB29 | ZNF901 | hic-1hypermethylated in cancer 117p13.3CV:PGCnp
9094UNC119HRG4 | IMD13 | POC7 | POC7Aunc-119 lipid binding chaperone17q11.2DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
6532SLC6A45-HTT | 5-HTTLPR | 5HTT | HTT | OCD1 | SERT | SERT1 | hSERTsolute carrier family 6 member 417q11.2ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
SEROTONIN
55803ADAP2CENTA2 | HSA272195 | cent-bArfGAP with dual PH domains 217q11.2CV:PGCnp
100170841C17orf96PRR28chromosome 17 open reading frame 9617q12CV:PGCnp
51195RAPGEFL1Link-GEFIIRap guanine nucleotide exchange factor like 117q21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
65266WNK4PHA2B | PRKWNK4WNK lysine deficient protein kinase 417q21.2GO_Annotation
PMID:cooccur
4185ADAM11MDCADAM metallopeptidase domain 1117q21.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
79777ACBD4HMFT0700acyl-CoA binding domain containing 417q21.31CV:PGCnp
DMG:Jaffe_2016
51226COPZ2zeta2-COPcoatomer protein complex subunit zeta 217q21.32CV:PGCnp
DMG:Jaffe_2016
3690ITGB3BDPLT16 | BDPLT2 | CD61 | GP3A | GPIIIa | GTintegrin subunit beta 317q21.32CV:PGCnp
Network
PMID:cooccur
1748DLX4BP1 | DLX7 | DLX8 | DLX9 | OFC15distal-less homeobox 417q21.33CV:PGCnp
DMG:Wockner_2014
8913CACNA1GCa(V)T.1 | Cav3.1 | NBR13 | SCA42calcium voltage-gated channel subunit alpha1 G17q22CV:PGCnpCompositeSet
Darnell FMRP targets
Potential synaptic genes
1636ACEACE1 | CD143 | DCP | DCP1 | ICH | MVCD3angiotensin I converting enzyme17q23.3CV:PGCnp
Network
PMID:cooccur
1534CYB561CYB561A1 | FRRS2cytochrome b56117q23.3CV:PGCnp
DMG:Wockner_2014
54757FAM20AAI1G | AIGFS | FP2747family with sequence similarity 20 member A17q24.2CV:PGCnp
DNM:Fromer_2014
201292TRIM654732463G12Riktripartite motif containing 6517q25.1CV:PGCnp
DMG:Wockner_2014
326624RAB37-RAB37, member RAS oncogene family17q25.1CV:PheWAS
DMG:Wockner_2014
G2Cdb.humanNRC
G2Cdb.humanPSP
3993LLGL2HGL | Hugl-2 | LGL2lethal giant larvae homolog 2, scribble cell polarity complex component17q25.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
439921MXRA7PS1TP1 | TMAP1matrix-remodelling associated 717q25.1CV:PGCnp
DMG:Wockner_2014
146664MGAT5BGnT-IX | GnT-VBmannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B17q25.2CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
8811GALR2GAL2-R | GALNR2 | GALR-2galanin receptor 217q25.3GO_Annotation
PMID:cooccur
2774GNALDYT25G protein subunit alpha L18p11.22-p11.21Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
79822ARHGAP28-Rho GTPase activating protein 2818p11.31CV:PGCnp
23136EPB41L34.1B | DAL-1 | DAL1erythrocyte membrane protein band 4.1-like 318p11.32CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
56853CELF4BRUNOL4 | CELF-4CUGBP, Elav-like family member 418q12CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
83608C18orf21HsT3108 | PNAS-124 | PNAS-131 | XTP13chromosome 18 open reading frame 2118q12.2CV:PGCnp
4645MYO5B-myosin VB18q21CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Potential synaptic genes
9480ONECUT2OC-2 | OC2one cut homeobox 218q21.31CV:PGCnp
DMG:Jaffe_2016
4155MBP-myelin basic protein18q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
9244CRLF1CISS | CISS1 | CLF | CLF-1 | NR6 | zcytor5cytokine receptor-like factor 119p12CV:PGCnp
DMG:Wockner_2014
1311COMPEDM1 | EPD1 | MED | PSACH | THBS5cartilage oligomeric matrix protein19p13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
404037HAPLN4BRAL2hyaluronan and proteoglycan link protein 419p13.1CV:PGCnp
LK:YES
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
23149FCHO1-FCH domain only 119p13.11CV:PGCnpCompositeSet
Darnell FMRP targets
6511SLC1A6EAAT4solute carrier family 1 member 619p13.12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
57662CAMSAP3KIAA1543 | NEZHA | PPP1R80calmodulin regulated spectrin associated protein family member 319p13.2CV:PGCnp
1943EFNA2ELF-1 | EPLG6 | HEK7-L | LERK-6 | LERK6ephrin-A219p13.3CV:PGCnp
4145MATKCHK | CTK | HHYLTK | HYL | HYLTK | Lskmegakaryocyte-associated tyrosine kinase19p13.3PMID:cooccur
5990RFX2-regulatory factor X219p13.3CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
10683DLL3SCDO1delta-like 3 (Drosophila)19q13CV:PGCnp
DMG:Wockner_2014
6324SCN1BATFB13 | BRGDA5 | GEFSP1sodium voltage-gated channel beta subunit 119q13.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
EXCITABILITY
94274PPP1R14ACPI-17 | CPI17 | PPP1INLprotein phosphatase 1 regulatory inhibitor subunit 14A19q13.1CV:PGCnp
DMG:Wockner_2014
8425LTBP4ARCL1C | LTBP-4 | LTBP4L | LTBP4Slatent transforming growth factor beta binding protein 419q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
51599LSRILDR3 | LISCH7lipolysis stimulated lipoprotein receptor19q13.12CV:GWASdb
CV:PGCnp
PMID:cooccur
148014TTC9B-tetratricopeptide repeat domain 9B19q13.2DMG:Wockner_2014
478ATP1A3AHC2 | CAPOS | DYT12 | RDPATPase Na+/K+ transporting subunit alpha 319q13.31CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2906GRIN2DEB11 | GluN2D | NMDAR2D | NR2Dglutamate ionotropic receptor NMDA type subunit 2D19q13.33Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
7482WNT2BWNT13wingless-type MMTV integration site family member 2B1p13CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
148281SYT6sytVIsynaptotagmin 61p13.2CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
148534TMEM56-transmembrane protein 561p21.3CV:PGCnp
DMG:Wockner_2014
23566LPAR3EDG7 | Edg-7 | GPCR | HOFNH30 | LP-A3 | LPA3 | RP4-678I3lysophosphatidic acid receptor 31p22.3CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
GO_Annotation
CompositeSet
91624NEXNCMH20 | NELINnexilin (F actin binding protein)1p31.1CV:PGCnp
GSMA_IIA
55225RAVER2-ribonucleoprotein, PTB-binding 21p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
9829DNAJC6DJC6 | PARK19DnaJ heat shock protein family (Hsp40) member C61p31.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
22996TTC39AC1orf34 | DEME-6tetratricopeptide repeat domain 39A1p32.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
84871AGBL4CCP6ATP/GTP binding protein-like 41p33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9132KCNQ4DFNA2 | DFNA2A | KV7.4potassium voltage-gated channel subfamily Q member 41p34CV:PGCnp
PMID:cooccur
149483CCDC17-coiled-coil domain containing 171p34.1DMG:Wockner_2014
84879MFSD2AMCPH15 | MFSD2 | NLS1major facilitator superfamily domain containing 2A1p34.2CV:GWASdb
CV:PGCnp
284716RIMKLAFAM80A | NAAGS | NAAGS-IIribosomal modification protein rimK-like family member A1p34.2CV:PGCnp
81888HYIHT036hydroxypyruvate isomerase (putative)1p34.2CV:PGCnp
54952TRNAU1APPRO1902 | SECP43 | TRSPAP1tRNA selenocysteine 1 associated protein 11p35.3CV:PGCnp
3362HTR65-HT6 | 5-HT6R5-hydroxytryptamine receptor 61p36-p35ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
PMID:cooccur
5909RAP1GAPRAP1GA1 | RAP1GAP1 | RAP1GAPII | RAPGAPRAP1 GTPase activating protein1p36.1-p35CV:PGCnp
DMG:Wockner_2014
CANABINOID
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
57822GRHL3SOM | TFCP2L4 | VWS2grainyhead like transcription factor 31p36.11CV:GWASdb
CV:PGCnp
115572FAM46B-family with sequence similarity 46 member B1p36.11CV:PGCnp
249ALPLAP-TNAP | APTNAP | HOPS | TNAP | TNSALPalkaline phosphatase, liver/bone/kidney1p36.12CV:PGCnp
DMG:Wockner_2014
6920TCEA3TFIIS | TFIIS.Htranscription elongation factor A31p36.12CV:GWASdb
CV:PGCnp
57085AGTRAPATRAPangiotensin II receptor associated protein1p36.22CV:GWAScat
CV:GWASdb
CV:PGCnp
26038CHD5CHD-5chromodomain helicase DNA binding protein 51p36.31CV:PGCnp
DNM:Guipponi_2014
CompositeSet
Darnell FMRP targets
387509GPR153PGR1G protein-coupled receptor 1531p36.31DMG:Wockner_2014
DNM:Ambalavanan_2016
DNM:Xu_2012
PMID:cooccur
CompositeSet
390992HES3bHLHb43hes family bHLH transcription factor 31p36.31DMG:Jaffe_2016
DMG:Wockner_2014
83715ESPNDFNB36 | LP2654espin1p36.31CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
100287898TTC34-tetratricopeptide repeat domain 341p36.32CV:PGCnp
64856VWA1WARPvon Willebrand factor A domain containing 11p36.33DEG:Zhao_2015
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
6282S100A11HEL-S-43 | MLN70 | S100CS100 calcium binding protein A111q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
8407TAGLN2HA1756transgelin 21q21-q25CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
Network
148741ANKRD35-ankyrin repeat domain 351q21.1CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
54507ADAMTSL4ADAMTSL-4 | ECTOL2 | TSRC1ADAMTS like 41q21.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
1141CHRNB2EFNL3 | nAChRB2cholinergic receptor nicotinic beta 2 subunit1q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
LIGAND GATED ION SIGNALING
375033PEAR1JEDI | MEGF12platelet endothelial aggregation receptor 11q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
3766KCNJ10BIRK-10 | KCNJ13-PEN | KIR1.2 | KIR4.1 | SESAMEpotassium voltage-gated channel subfamily J member 101q23.2CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
EXCITABILITY
25903OLFML2B-olfactomedin like 2B1q23.3CV:GWASdb
CV:PGCnp
GSMA_IIA
59352LGR6GPCR | VTS20631leucine-rich repeat containing G protein-coupled receptor 61q32.1CV:PGCnp
DMG:Wockner_2014
56256SERTAD4DJ667H12.2SERTA domain containing 41q32.1-q41CV:PGCnp
DMG:Wockner_2014
29937NENFCIR2 | SCIRP10 | SPUFneudesin neurotrophic factor1q32.3CV:PGCnp
DMG:Jaffe_2016
55509BATF3JDP1 | JUNDM1 | SNFTbasic leucine zipper ATF-like transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
3776KCNK2K2p2.1 | TPKC1 | TREK | TREK-1 | TREK1 | hTREK-1c | hTREK-1epotassium two pore domain channel subfamily K member 21q41CV:PGCnp
DMG:Jaffe_2016
Expression
148641SLC35F3-solute carrier family 35 member F31q42.2CV:PGCnp
DMG:Wockner_2014
55614KIF16BC20orf23 | KISC20ORF | SNX23kinesin family member 16B20p11.23CV:PGCnp
1114CHGBSCG1chromogranin B20p12.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
146ADRA1DADRA1 | ADRA1A | ADRA1R | ALPHA1 | DAR | dJ779E11.2adrenoceptor alpha 1D20p13ADT:Sun_2012
CV:PGCnp
PMID:cooccur
6640SNTA1LQT12 | SNT1 | TACIP1 | dJ1187J4.5syntrophin alpha 120q11.2CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
128853DUSP15C20orf57 | VHYdual specificity phosphatase 1520q11.21CV:PGCnp
DNM:Fromer_2014
CompositeSet
140679SLC32A1VGAT | VIAATsolute carrier family 32 member 120q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
85449KIAA1755-KIAA175520q11.23CV:PGCnp
DMG:Wockner_2014
655BMP7OP-1bone morphogenetic protein 720q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
100ADA-adenosine deaminase20q13.12CV:PGCnp
Network
PMID:cooccur
10079ATP9AATPIIAATPase phospholipid transporting 9A (putative)20q13.2CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
4773NFATC2NFAT1 | NFATPnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 220q13.2CV:GWASdb
CV:PGCnp
Network
3745KCNB1DRK1 | EIEE26 | KV2.1 | h-DRK1potassium voltage-gated channel subfamily B member 120q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
11096ADAMTS5ADAM-TS 11 | ADAM-TS 5 | ADAM-TS5 | ADAMTS-11 | ADAMTS-5 | ADAMTS11 | ADMP-2ADAM metallopeptidase with thrombospondin type 1 motif 521q21.3CV:PGCnp
DMG:Jaffe_2016
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
81543LRRC3C21orf102leucine rich repeat containing 321q22.3DMG:Jaffe_2016
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
875CBSHIP4cystathionine-beta-synthase21q22.3CV:PGCnp
PMID:cooccur
150223YDJC-YdjC homolog (bacterial)22q11.21DMG:Jaffe_2016
164592CCDC116-coiled-coil domain containing 11622q11.21CV:PGCnp
GSMA_I
421ARVCF-armadillo repeat gene deleted in velocardiofacial syndrome22q11.21Association
CNV:YES
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2812GP1BBBDPLT1 | BS | CD42C | GPIBB | GPIbbetaglycoprotein Ib platelet beta subunit22q11.21CNV:YES
GSMA_I
2781GNAZ-G protein subunit alpha z22q11.22GSMA_I
Network
PMID:cooccur
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
157ADRBK2BARK2 | GRK3adrenergic, beta, receptor kinase 222q12.1CV:PGCnp
GSMA_I
PMID:cooccur
23762OSBP2HLM | ORP-4 | ORP4 | OSBPL1 | OSBPL4oxysterol binding protein 222q12.2CV:PGCnp
GSMA_I
3976LIFCDF | DIA | HILDA | MLPLIleukemia inhibitory factor22q12.2CV:PGCnp
GSMA_I
PMID:cooccur
55615PRR5FLJ20185k | PP610 | PROTOR-1 | PROTOR1proline rich 522q13CV:PGCnp
DMG:vanEijk_2014
29775CARD10BIMP1 | CARMA3caspase recruitment domain family member 1022q13.1CV:PGCnp
DMG:Montano_2016
84247LDOC1LMar6 | Mart6 | dJ1033E15.2leucine zipper, down-regulated in cancer 1-like22q13.31CV:GWASdb
CV:PGCnp
8291DYSFFER1L1 | LGMD2B | MMD1dysferlin2p13.3CV:PGCnp
DMG:Wockner_2014
53335BCL11ABCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856B-cell CLL/lymphoma 11A2p16.1CV:GWASdb
CV:PGCnp
PMID:cooccur
109ADCY3AC-III | AC3adenylate cyclase 32p23.3CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
Ascano FMRP targets
3754KCNF1IK8 | KCNF | KV5.1 | kH1potassium voltage-gated channel modifier subfamily F member 12p25CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
200407CREG2-cellular repressor of E1A stimulated genes 22q11.2CV:PGCnp
GSMA_I
9111NMI-N-myc and STAT interactor2q23CV:PGCnp
GSMA_IIA
PMID:cooccur
4065LY75CD205 | CLEC13B | DEC-205 | GP200-MR6 | LY-75lymphocyte antigen 752q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
91752ZNF804AC2orf10zinc finger protein 804A2q32.1Core
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Network
PMID:cooccur
51454GULP1CED-6 | CED6 | GULPGULP, engulfment adaptor PTB domain containing 12q32.3-q33CV:PGCnp
PMID:cooccur
66037BOLLBOULEboule homolog, RNA binding protein2q33CV:PGCnp
6508SLC4A3AE3 | SLC2Csolute carrier family 4 member 32q36CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
117581TWIST2AMS | BBRSAY | DERMO1 | FFDD3 | SETLSS | bHLHa39twist family bHLH transcription factor 22q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
166336PRICKLE2EPM5prickle planar cell polarity protein 23p14.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
8927BSNZNF231bassoon presynaptic cytomatrix protein3p21.31CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
131375LYZL4LYC4 | LYZAlysozyme like 43p22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
116135LRRC3BLRP15leucine rich repeat containing 3B3p24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
23180RFTN1MIG2 | PIB10 | PIG9 | RAFTLINraftlin, lipid raft linker 13p24.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
Ascano FMRP targets
3269HRH1H1-R | H1R | HH1R | hisH1histamine receptor H13p25ADT:Sun_2012
Association
CV:GWASdb
CV:PGCnp
GR_COR
GR_WM
GSMA_I
PMID:cooccur
2199FBLN2-fibulin 23p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
2257FGF12FGF12B | FHF1fibroblast growth factor 123q28CV:PGCnp
GO_Annotation
79730NSUN7-NOP2/Sun RNA methyltransferase family member 74p14CV:PGCnp
DMG:vanEijk_2014
55203LGI2LGIL2leucine-rich repeat LGI family member 24p15.2CV:PGCnp
56978PRDM8EPM10 | PFM5PR domain 84q21CV:PGCnp
DMG:Wockner_2014
651BMP3BMP-3Abone morphogenetic protein 34q21CV:PGCnp
DMG:Jaffe_2016
84570COL25A1AMY | CFEOM5 | CLAC | CLAC-P | CLACPcollagen type XXV alpha 14q25CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2247FGF2BFGF | FGF-2 | FGFB | HBGF-2fibroblast growth factor 24q26CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
85462FHDC1-FH2 domain containing 14q31.3CV:PGCnp
CV:PheWAS
10723SLC12A7KCC4solute carrier family 12 member 75p15CV:PGCnp
DMG:Wockner_2014
85409NKD2Naked2naked cuticle homolog 2 (Drosophila)5p15.3CV:PGCnp
DMG:Wockner_2014
7015TERTCMM9 | DKCA2 | DKCB4 | EST2 | PFBMFT1 | TCS1 | TP2 | TRT | hEST2 | hTRTtelomerase reverse transcriptase5p15.33CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
4015LOX-lysyl oxidase5q23.2DMG:Wockner_2014
PMID:cooccur
171019ADAMTS19-ADAM metallopeptidase with thrombospondin type 1 motif 195q23.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
56135PCDHAC1PCDH-ALPHA-C1protocadherin alpha subfamily C, 15q31CV:PGCnp
GO_Annotation
GSMA_I
51308REEP2C5orf19 | SGC32445 | SPG72 | Yip2dreceptor accessory protein 25q31CV:PGCnp
GSMA_I
26223FBXL21FBL3B | FBXL3B | FBXL3P | Fbl21F-box and leucine-rich repeat protein 21 (gene/pseudogene)5q31CV:PGCnp
GSMA_I
PMID:cooccur
154ADRB2ADRB2R | ADRBR | B2AR | BAR | BETA2ARadrenoceptor beta 25q31-q32CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
GPCR SIGNALLING
6932TCF7TCF-1transcription factor 7 (T-cell specific, HMG-box)5q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
6695SPOCK1SPOCK | TESTICAN | TIC1sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 15q31.2CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
11063SOX30-SRY-box 305q33CV:GWASdb
GSMA_I
GSMA_IIA
GSMA_IIE
147ADRA1BADRA1 | ALPHA1BARadrenoceptor alpha 1B5q33.3ADT:Sun_2012
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
8817FGF18FGF-18 | ZFGF5fibroblast growth factor 185q34Association
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
64324NSD1ARA267 | KMT3B | SOTOS | SOTOS1 | STOnuclear receptor binding SET domain protein 15q35CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
10814CPLX2921-L | CPX-2 | CPX2 | Hfb1complexin 25q35.2Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
91522COL23A1-collagen type XXIII alpha 15q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
Network
3159HMGA1HMG-R | HMGA1A | HMGIYhigh mobility group AT-hook 16p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
3710ITPR3IP3R | IP3R3inositol 1,4,5-trisphosphate receptor type 36p21CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
441151TMEM151BC6orf137 | TMEM193 | bA444E17.5transmembrane protein 151B6p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
CompositeSet
Darnell FMRP targets
29993PACSIN1SDPIprotein kinase C and casein kinase substrate in neurons 16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Potential synaptic genes
8705B3GALT4BETA3GALT4 | GALT2 | GALT4Beta-1,3-galactosyltransferase 46p21.3GSMA_I
255488RNF144BIBRDC2 | PIR2 | bA528A10.3 | p53RFPring finger protein 144B6p22.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
54898ELOVL2SSC2ELOVL fatty acid elongase 26p24.2CV:PGCnp
GSMA_I
PMID:cooccur
22999RIMS1CORD7 | RAB3IP2 | RIM | RIM1regulating synaptic membrane exocytosis 16q12-q13CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3351HTR1B5-HT-1B | 5-HT-1D-beta | 5-HT1B | 5-HT1DB | HTR1D2 | HTR1DB | S125-hydroxytryptamine receptor 1B6q13ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
SEROTONIN
135293PM20D2ACY1L2 | bA63L7.3peptidase M20 domain containing 26q15DMG:Jaffe_2016
2898GRIK2EAA4 | GLR6 | GLUK6 | GLUR6 | GluK2 | MRT6glutamate ionotropic receptor kainate type subunit 26q16.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
64208POPDC3POP3 | bA355M14.1popeye domain containing 36q21CV:PGCnp
10924SMPDL3AASM3A | ASML3a | yR36GH4.1sphingomyelin phosphodiesterase acid like 3A6q22.31CV:PGCnp
DMG:Nishioka_2013
9053MAP7E-MAP-115 | EMAP115microtubule associated protein 76q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5325PLAGL1LOT1 | ZAC | ZAC1PLAG1 like zinc finger 16q24-q25CV:PGCnp
DMG:Wockner_2014
51390AIG1AIG-1 | dJ95L4.1androgen-induced 16q24.2CV:PGCnp
DMG:Jaffe_2016
10320IKZF1Hs.54452 | IK1 | IKAROS | LYF1 | LyF-1 | PPP1R92 | PRO0758 | ZNFN1A1IKAROS family zinc finger 17p12.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GO_Annotation
4852NPYPYY4neuropeptide Y7p15.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
51085MLXIPLCHREBP | MIO | MONDOB | WBSCR14 | WS-bHLH | bHLHd14MLX interacting protein like7q11.23CNV:YES
CV:PGCnp
5244ABCB4ABC21 | GBD1 | ICP3 | MDR2 | MDR2/3 | MDR3 | PFIC-3 | PGY3ATP binding cassette subfamily B member 47q21.1CV:PGCnp
PMID:cooccur
64921CASD1C7orf12 | NBLA04196CAS1 domain containing 17q21.3CV:PGCnp
4885NPTX2NARP | NP-II | NP2neuronal pentraxin 27q21.3-q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Potential synaptic genes
43ACHEACEE | ARACHE | N-ACHE | YTacetylcholinesterase (Yt blood group)7q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
26136TESTESS | TESS-2testin LIM domain protein7q31.2CV:PGCnp
PMID:cooccur
7472WNT2INT1L1 | IRPwingless-type MMTV integration site family member 27q31.2CV:PGCnp
PMID:cooccur
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
1804DPP6DPL1 | DPPX | MRD33 | VF2dipeptidyl peptidase like 67q36.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
7434VIPR2C16DUPq36.3 | DUP7q36.3 | PACAP-R-3 | PACAP-R3 | VIP-R-2 | VPAC2 | VPAC2R | VPCAP2Rvasoactive intestinal peptide receptor 27q36.3CNV:YES
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
286ANK1ANK | SPH1 | SPH2ankyrin 18p11.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Expression
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
79698ZMAT4-zinc finger matrin-type 48p11.21CV:PGCnp
59339PLEKHA2TAPP2pleckstrin homology domain containing A28p11.22CV:PGCnp
DMG:Jaffe_2016
64641EBF2COE2 | EBF-2 | O/E-3 | OE-3early B-cell factor 28p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
9108MTMR7-myotubularin related protein 78p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
9258MFHAS1LRRC65 | MASL1malignant fibrous histiocytoma amplified sequence 18p23.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3574IL7IL-7interleukin 78q12-q13CV:GWASdb
CV:PGCnp
116328C8orf34VEST-1 | VEST1chromosome 8 open reading frame 348q13CV:PGCnp
DMG:Wockner_2014
81796SLCO5A1OATP-J | OATP-RP4 | OATP5A1 | OATPJ | OATPRP4 | SLC21A15solute carrier organic anion transporter family member 5A18q13.3CV:GWASdb
CV:PGCnp
1666DECR1DECR | NADPH | SDR18C12,4-dienoyl-CoA reductase 1, mitochondrial8q21.3CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
8323FZD6FZ-6 | FZ6 | HFZ6 | NDNC10frizzled class receptor 68q22.3-q23.1CV:GWASdb
CV:PGCnp
51571FAM49BBM-009 | L1family with sequence similarity 49 member B8q24.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23237ARCArg3.1activity-regulated cytoskeleton-associated protein8q24.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
1993ELAVL2HEL-N1 | HELN1 | HUBELAV like neuron-specific RNA binding protein 29p21CV:GWASdb
CV:PGCnp
PMID:cooccur
56033BARX1-BARX homeobox 19q12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9615GDACYPIN | GUANASE | NEDASINguanine deaminase9q21.13CV:PGCnp
GO_Annotation
PMID:cooccur
CELL METABOLISM
G2Cdb.human_TAP-PSD-95-CORE
Potential synaptic genes
4920ROR2BDB | BDB1 | NTRKR2receptor tyrosine kinase-like orphan receptor 29q22CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
158046NXNL2C9orf121 | RDCVF2nucleoredoxin-like 29q22.1CV:PGCnp
10507SEMA4DC9orf164 | CD100 | M-sema-G | SEMAJ | coll-4semaphorin 4D9q22.2CV:PGCnp
GO_Annotation
PMID:cooccur
54769DIRAS2Di-Ras2DIRAS family GTP binding RAS like 29q22.2CV:GWASdb
CV:PGCnp
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9830TRIM14-tripartite motif containing 149q22.33CV:PGCnp
DMG:Wockner_2014
79695GALNT12CRCS1 | GalNAc-T12polypeptide N-acetylgalactosaminyltransferase 129q22.33CV:PGCnp
DMG:Wockner_2014
4010LMX1BLMX1.2 | NPS1LIM homeobox transcription factor 1 beta9q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
20ABCA2ABC2ATP binding cassette subfamily A member 29q34DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
774CACNA1BBIII | CACNL1A5 | CACNN | Cav2.2 | DYT23calcium voltage-gated channel subunit alpha1 B9q34CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1759DNM1DNM | EIEE31dynamin 19q34CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Darnell FMRP targets
Potential synaptic genes
11182SLC2A6GLUT6 | GLUT9 | HSA011372solute carrier family 2 member 69q34CV:PGCnp
10439OLFM1AMY | NOE1 | NOELIN1 | OlfAolfactomedin 19q34.3CV:PGCnp
DEG:Maycox_2009
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
138311FAM69BC9orf136 | pp6977family with sequence similarity 69 member B9q34.3CV:PGCnp
DMG:Wockner_2014
7504XKKX | MCLDS | NA | NAC | X1k | XKR1X-linked Kx blood groupXp21.1CV:PGCnp
PMID:cooccur
203447NRKNESKNik related kinaseXq22.3CV:PGCnp
Expression
PMID:cooccur
63035BCORL1BCoR-L1 | CXorf10BCL6 corepressor-like 1Xq25-q26.1CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
9248GPR50H9 | Mel1cG protein-coupled receptor 50Xq28CV:GWASdb
CV:PGCnp
PMID:cooccur
Potential synaptic genes