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| GeneID |
774
|
| Symbol |
CACNA1B
|
| Synonyms |
BIII|CACNL1A5|CACNN|Cav2.2
|
| Description |
calcium channel, voltage-dependent, N type, alpha 1B subunit |
| See related |
HGNC:1389|MIM:601012|HPRD:03005| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
9q34 |
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| Gene set name |
Method of gene set |
Evidence |
Info |
| Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia] | Click to show detail | | GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 1 | |
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| General Gene Expression (microarray) ? |
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| Gene Expression in Brain Regions (new) |
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| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| ITPKA | 0.87 | 0.86 | | |
| CA11 | 0.83 | 0.88 | | |
| TMEM38A | 0.83 | 0.85 | | |
| ACOT4 | 0.82 | 0.84 | | |
| RUNDC3A | 0.82 | 0.73 | | |
| ENSA | 0.82 | 0.69 | | |
| TUBA1 | 0.81 | 0.87 | | |
| ST6GALNAC6 | 0.81 | 0.81 | | |
| ADAP1 | 0.81 | 0.76 | | |
| CAMK2N1 | 0.81 | 0.73 | | |
Top 10 negatively co-expressed genes | | KIAA1949 | -0.63 | -0.66 | | |
| TUBB2B | -0.63 | -0.71 | | |
| FADS2 | -0.61 | -0.67 | | |
| SH3BP2 | -0.61 | -0.72 | | |
| ZNF311 | -0.60 | -0.61 | | |
| KCTD11 | -0.60 | -0.70 | | |
| JUP | -0.59 | -0.63 | | |
| COTL1 | -0.59 | -0.62 | | |
| ZNF193 | -0.59 | -0.63 | | |
| TIGD1 | -0.59 | -0.63 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000166 | nucleotide binding | IEA | | - |
| GO:0005509 | calcium ion binding | IEA | | - |
| GO:0005524 | ATP binding | IEA | | - |
| GO:0005244 | voltage-gated ion channel activity | IEA | | - |
| GO:0005245 | voltage-gated calcium channel activity | IEA | | - |
| GO:0005245 | voltage-gated calcium channel activity | TAS | | 1321501 |
| GO:0008022 | protein C-terminus binding | IPI | | 15728831 |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0007268 | synaptic transmission | TAS | neuron, Synap, Neurotransmitter (GO term level: 6) | 9030575 |
| GO:0006816 | calcium ion transport | IEA | | - |
| GO:0006811 | ion transport | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0016021 | integral to membrane | IEA | | - |
| GO:0005886 | plasma membrane | EXP | | 8825650 |
| GO:0005891 | voltage-gated calcium channel complex | TAS | | 1321501 |
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