Search results: The pahtway p4705 has 1839 genes in the original annotation. Currently, there are 928 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
100507444PPP1R2P1IPP-2P | PPP1R2Pprotein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1-DMG:Wockner_2014
56832IFNKIFNT1 | INFE1interferon, kappa-CV:PGCnp
1390CREMCREM-2 | ICER | hCREM-2cAMP responsive element modulator10p11.21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
220929ZNF438bA330O11.1zinc finger protein 43810p11.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
84898PLXDC2TEM7Rplexin domain containing 210p12.31CV:PGCnp
DMG:Nishioka_2013
219681ARMC3CT81 | KU-CT-1armadillo repeat containing 310p12.31CV:PGCnp
DMG:Wockner_2014
22944KINBTCD | KIN17 | Rts2Kin17 DNA and RNA binding protein10p14CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
100533184ARHGAP19-SLIT1-ARHGAP19-SLIT1 readthrough (NMD candidate)10qCV:PGCnp
240ALOX55-LO | 5-LOX | 5LPG | LOG5arachidonate 5-lipoxygenase10q11.2CV:PGCnp
DMG:Jaffe_2016
118738ZNF488-zinc finger protein 48810q11.22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
221037JMJD1CTRIP-8 | TRIP8jumonji domain containing 1C10q21.3CV:PGCnp
DMG:Wockner_2014
84890ADOC10orf222-aminoethanethiol (cysteamine) dioxygenase10q21.3CV:PGCnp
Expression
PMID:cooccur
29982NRBF2COPR | COPR1 | COPR2 | NRBF-2nuclear receptor binding factor 210q21.3CV:PGCnp
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9469CHST3C6ST | C6ST1 | HSDcarbohydrate (chondroitin 6) sulfotransferase 310q22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
23522KAT6BGTPTS | MORF | MOZ2 | MYST4 | ZC2HC6B | qkf | querkopflysine acetyltransferase 6B10q22.2CV:PGCnp
DMG:Jaffe_2016
Expression
57178ZMIZ1MIZ | RAI17 | TRAFIP10 | ZIMP10 | hZIMP10zinc finger MIZ-type containing 110q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
114815SORCS1hSorCSsortilin related VPS10 domain containing receptor 110q23-q25CV:GWASdb
CV:PGCnp
GO_Annotation
6623SNCGBCSG1 | SRsynuclein gamma10q23.2-q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
29760BLNKAGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bcaB-cell linker10q23.2-q23.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
59ACTA2AAT6 | ACTSA | MYMY5actin, alpha 2, smooth muscle, aorta10q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
403ARL3ARFL3ADP ribosylation factor like GTPase 310q23.3CV:PGC128
CV:PGCnp
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
283011FLJ37201-tigger transposable element derived 2 pseudogene10q23.31CV:PGCnp
22849CPEB3-cytoplasmic polyadenylation element binding protein 310q23.32CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
10660LBX1HPX-6 | HPX6 | LBX1H | homeoboxladybird homeobox 110q24CV:PGCnp
GO_Annotation
27250PDCD4H731programmed cell death 4 (neoplastic transformation inhibitor)10q24DMG:Jaffe_2016
9211LGI1ADLTE | ADPAEF | ADPEAF | EPITEMPIN | EPT | ETL1 | IB1099leucine-rich, glioma inactivated 110q24CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
5662PSDEFA6 | EFA6A | PSD1 | TYLpleckstrin and Sec7 domain containing10q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9060PAPSS2ATPSK2 | BCYM4 | SK23'-phosphoadenosine 5'-phosphosulfate synthase 210q24CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
57715SEMA4G-semaphorin 4G10q24.31CV:PGCnp
GO_Annotation
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
22978NT5C2GMP | NT5B | PNT5 | SPG45 | SPG65 | cN-II5'-nucleotidase, cytosolic II10q24.32CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2263FGFR2BBDS | BEK | BFR-1 | CD332 | CEK3 | CFD1 | ECT1 | JWS | K-SAM | KGFR | TK14 | TK25fibroblast growth factor receptor 210q26CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
64077LHPPHDHD2Bphospholysine phosphohistidine inorganic pyrophosphate phosphatase10q26.13CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
92565FANK1HSD13fibronectin type III and ankyrin repeat domains 110q26.2CV:PGCnp
GSMA_IIA
1643DDB2DDBB | UV-DDB2 | XPEdamage specific DNA binding protein 211p11.2CV:PGCnp
51317PHF21ABHC80 | BM-006PHD finger protein 21A11p11.2CV:PGCnp
PMID:cooccur
79096C11orf49-chromosome 11 open reading frame 4911p11.2CV:PGCnp
79797ZNF408EVR6 | RP72zinc finger protein 40811p11.2CV:PGCnp
Expression
Network
3732CD824F9 | C33 | GR15 | IA4 | KAI1 | R2 | SAR2 | ST6 | TSPAN27CD82 molecule11p11.2CV:PGCnp
Network
26298EHFESE3 | ESE3B | ESEJETS homologous factor11p12CV:GWAScat
CV:PGCnp
PMID:cooccur
847CAT-catalase11p13CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
81930KIF18AMS-KIF18A | PPP1R99kinesin family member 18A11p14.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
387758FIBIN-fin bud initiation factor homolog (zebrafish)11p14.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
89797NAV2HELAD1 | POMFIL2 | RAINB1 | STEERIN2 | UNC53H2neuron navigator 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
6288SAA1PIG4 | SAA | SAA2 | TP53I4serum amyloid A111p15.1CV:GWASdb
CV:PGCnp
144100PLEKHA7-pleckstrin homology domain containing A711p15.1CV:PGCnpAscano FMRP targets
6289SAA2-serum amyloid A211p15.1-p14CV:GWAScat
CV:GWASdb
CV:PGCnp
7003TEAD1AA | NTEF-1 | REF1 | TCF-13 | TCF13 | TEAD-1 | TEF-1TEA domain transcription factor 111p15.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
114879OSBPL5OBPH1 | ORP5oxysterol binding protein like 511p15.4CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
10394PRG3MBP2 | MBPHproteoglycan 311q12CV:PGCnp
64231MS4A6A4SPAN3 | 4SPAN3.2 | CD20L3 | CDA01 | MS4A6 | MST090 | MSTP090membrane spanning 4-domains A6A11q12.1CV:PGCnp
DMG:vanEijk_2014
338674OR5F1OR11-10olfactory receptor family 5 subfamily F member 111q12.1CV:GWASdb
7108TM7SF2ANG1 | DHCR14A | NET47transmembrane 7 superfamily member 211q13DMG:Wockner_2014G2Cdb.humanPSD
G2Cdb.humanPSP
221ALDH3B1ALDH4 | ALDH7aldehyde dehydrogenase 3 family member B111q13CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
5017OVOL1HOVO1ovo like zinc finger 111q13CV:PGCnp
DMG:Wockner_2014
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
254263CNIH2CNIH-2 | Cnilcornichon family AMPA receptor auxiliary protein 211q13.2DMG:Wockner_2014
79703C11orf80-chromosome 11 open reading frame 8011q13.2CV:PGCnp
9633MTL5CXCDC2 | MTLT | TESMINmetallothionein-like 5, testis-specific (tesmin)11q13.3CV:PGCnp
374407DNAJB13RSPH16A | TSARG5 | TSARG6DnaJ heat shock protein family (Hsp40) member B1311q13.4CV:PGCnp
220074LRTOMTCFAP111 | DFNB63 | LRRC51leucine rich transmembrane and O-methyltransferase domain containing11q13.4CV:PGCnp
DMG:Wockner_2014
4135MAP6MAP6-N | MTAP6 | N-STOP | STOPmicrotubule associated protein 611q13.5Association
CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5058PAK1PAKalphap21 protein (Cdc42/Rac)-activated kinase 111q13.5-q14.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
54843SYTL2CHR11SYT | EXO4 | PPP1R151 | SGA72M | SLP2 | SLP2Asynaptotagmin like 211q14CV:PGCnp
DEG:Zhao_2015
GO_Annotation
EXOCYTOSIS
1740DLG2PPP1R58 | PSD-93 | PSD93 | chapsyn-110discs large homolog 211q14.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
338699ANKRD42PPP1R79 | SARPankyrin repeat domain 4211q14.1CV:PGCnp
283219KCTD21KCASH2potassium channel tetramerization domain containing 2111q14.1CV:PGCnp
84441MAML2MAM-3 | MAM2 | MAM3 | MLL-MAML2mastermind like transcriptional coactivator 211q21CV:PGCnp
DNM:Fromer_2014
CompositeSet
28970C11orf54PTD012 | PTOD012chromosome 11 open reading frame 5411q21CV:PGCnp
DMG:Nishioka_2013
2977GUCY1A2GC-SA2 | GUC1A2guanylate cyclase 1, soluble, alpha 211q21-q22CV:GWASdb
CV:PGCnp
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
23086EXPH5SLAC2-B | SLAC2Bexophilin 511q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
4321MMP12HME | ME | MME | MMP-12matrix metallopeptidase 1211q22.3CV:GWASdb
CV:PGCnp
5920RARRES3HRASLS4 | HRSL4 | PLA1/2-3 | RIG1 | TIG3retinoic acid receptor responder (tazarotene induced) 311q23CV:PGCnp
DMG:Wockner_2014
55823VPS11END1 | HLD12 | PEP5 | RNF108 | hVPS11VPS11, CORVET/HOPS core subunit11q23CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
7704ZBTB16PLZF | ZNF145zinc finger and BTB domain containing 1611q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
54494C11orf71URLC7chromosome 11 open reading frame 7111q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9099USP2UBP41 | USP9ubiquitin specific peptidase 211q23.3CV:PGCnp
GSMA_I
PMID:cooccur
196264MPZL3-myelin protein zero like 311q23.3CV:PGCnp
GSMA_I
7070THY1CD90 | CDw90Thy-1 cell surface antigen11q23.3DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
23187PHLDB1LL5Apleckstrin homology like domain family B member 111q23.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
56649TMPRSS4CAPH2 | MT-SP2 | TMPRSS3transmembrane protease, serine 411q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
6230RPS25S25ribosomal protein S2511q23.3CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6330SCN4BATFB17 | LQT10 | Navbeta4sodium voltage-gated channel beta subunit 411q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
EXCITABILITY
4013VWA5ABCSC-1 | BCSC1 | LOH11CR2Avon Willebrand factor A domain containing 5A11q24.1CV:PGCnp
57476GRAMD1B-GRAM domain containing 1B11q24.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
219833C11orf45-chromosome 11 open reading frame 4511q24.3DMG:Nishioka_2013
DMG:Wockner_2014
6857SYT1P65 | SVP65 | SYTsynaptotagmin 112cen-q21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
58516FAM60AC12orf14 | L4 | TERAfamily with sequence similarity 60 member A12p11CV:PGCnp
DMG:Montano_2016
121512FGD4CMT4H | FRABP | ZFYVE6FYVE, RhoGEF and PH domain containing 412p11.21CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
196394AMN1-antagonist of mitotic exit network 1 homolog12p11.21CV:PGCnp
DMG:Wockner_2014
5288PIK3C2GPI3K-C2-gamma | PI3K-C2GAMMAphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma12p12Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
4256MGPGIG36 | MGLAP | NTImatrix Gla protein12p12.3PMID:cooccur
715C1R-complement C1r subcomponent12p13CV:PGCnp
GO_Annotation
2120ETV6TEL | TEL/ABL | THC5ETS variant 612p13CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
23710GABARAPL1APG8-LIKE | APG8L | ATG8 | ATG8B | ATG8L | GEC1GABA(A) receptor-associated protein like 112p13.2CV:GWASdb
CV:PGCnp
GO_Annotation
6515SLC2A3GLUT3solute carrier family 2 member 312p13.3CV:PGCnp
PMID:cooccur
CELL METABOLISM
51147ING4my036 | p29ING4inhibitor of growth family member 412p13.31DMG:Wockner_2014
3902LAG3CD223lymphocyte activating 312p13.32DMG:vanEijk_2014
PMID:cooccur
83956RACGAP1PFKSG42Rac GTPase activating protein 1 pseudogene12q12CV:PGCnp
144165PRICKLE1EPM1B | RILPprickle planar cell polarity protein 112q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
283463MUC19MUC-19mucin 19, oligomeric12q12CV:GWASdb
CV:PGCnp
4891SLC11A2DCT1 | DMT1 | NRAMP2solute carrier family 11 member 212q13CV:PGCnp
PMID:cooccur
6778STAT6D12S1644 | IL-4-STAT | STAT6B | STAT6Csignal transducer and activator of transcription 612q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2065ERBB3ErbB-3 | HER3 | LCCS2 | MDA-BF-1 | c-erbB-3 | c-erbB3 | erbB3-S | p180-ErbB3 | p45-sErbB3 | p85-sErbB3erb-b2 receptor tyrosine kinase 312q13Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
7786MAP3K12DLK | MEKK12 | MUK | ZPK | ZPKP1mitogen-activated protein kinase kinase kinase 1212q13CV:PGCnpCompositeSet
Darnell FMRP targets
5916RARGNR1B3 | RARCretinoic acid receptor gamma12q13CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
2647BLOC1S1BLOS1 | BORCS1 | GCN5L1 | MICoA | RT14biogenesis of lysosomal organelles complex 1 subunit 112q13-q14Network
PMID:cooccur
50846DHHGDXYM | HHG-3 | SRXY7desert hedgehog12q13.1CV:PGCnp
PMID:cooccur
65244SPATS2Nbla00526 | P59SCR | SCR59 | SPATA10spermatogenesis associated serine rich 212q13.12CV:PGCnp
DMG:Jaffe_2016
25840METTL7AAAM-Bmethyltransferase like 7A12q13.12CV:PGCnp
DEG:Zhao_2015
Expression
3798KIF5AD12S1889 | MY050 | NKHC | SPG10kinesin family member 5A12q13.13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
1975EIF4BEIF-4B | PRO1843eukaryotic translation initiation factor 4B12q13.13CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
57658CALCOCO1Cocoa | PP13275 | calphoglincalcium binding and coiled-coil domain 112q13.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
3695ITGB7-integrin subunit beta 712q13.13CV:PGCnp
DMG:vanEijk_2014
Network
6773STAT2IMD44 | ISGF-3 | P113 | STAT113signal transducer and activator of transcription 212q13.3CV:PGCnp
4035LRP1A2MR | APOER | APR | CD91 | IGFBP3R | LRP | LRP1A | TGFBR5LDL receptor related protein 112q13.3CV:PGCnp
DNM:Girard_2011
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1594CYP27B1CP2B | CYP1 | CYP1alpha | CYP27B | P450c1 | PDDR | VDD1 | VDDR | VDDRI | VDRcytochrome P450 family 27 subfamily B member 112q14.1DMG:Wockner_2014
PMID:cooccur
121227LRIG3LIG3leucine-rich repeats and immunoglobulin like domains 312q14.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
23426GRIP1GRIPglutamate receptor interacting protein 112q14.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_mGluR5
Ascano FMRP targets
Potential synaptic genes
1368CPM-carboxypeptidase M12q14.3CV:PGCnp
PMID:cooccur
117177RAB3IPRABIN3 | RABIN8RAB3A interacting protein12q15CV:PGCnp
55266TMEM19-transmembrane protein 1912q21.1CV:PGCnp
196441ZFC3H1CCDC131 | CSRC2 | PSRC2zinc finger C3H1-type containing12q21.1CV:PGCnp
DMG:Wockner_2014
29080CCDC59BR22 | HSPC128 | TAP26coiled-coil domain containing 5912q21.31CV:PGCnp
DMG:Jaffe_2016
160335TMTC2IBDBP1transmembrane and tetratricopeptide repeat containing 212q21.31CV:GWASdb
CV:PGCnp
91298C12orf29-chromosome 12 open reading frame 2912q21.32CV:PGCnp
282809POC1BCORD20 | PIX1 | TUWD12 | WDR51BPOC1 centriolar protein B12q21.33CV:PGCnp
59277NTN4PRO3091netrin 412q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
400ARL1ARFL1ADP ribosylation factor like GTPase 112q23.2CV:PGCnp
DMG:Jaffe_2016
Network
51019CCDC53CGI-116coiled-coil domain containing 5312q23.2CV:PGCnp
DMG:Jaffe_2016
Network
4801NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y subunit beta12q23.3CV:PGCnp
DMG:Jaffe_2016
255394TCP11L2-t-complex 11 like 212q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
387882C12orf75AGD3 | OCC-1 | OCC1chromosome 12 open reading frame 7512q23.3CV:GWASdb
CV:PGCnp
29915HCFC2HCF-2 | HCF2host cell factor C212q23.3CV:PGCnp
PMID:cooccur
84102SLC41A2SLC41A1-L1solute carrier family 41 member 212q23.3CV:GWASdb
CV:PGCnp
6404SELPLGCD162 | CLA | PSGL-1 | PSGL1selectin P ligand12q24CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
1240CMKLR1CHEMERINR | ChemR23 | DEZ | RVER1chemerin chemokine-like receptor 112q24.1CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
144715RAD9B-RAD9 checkpoint clamp component B12q24.11CV:PGCnp
28981IFT81CDV-1 | CDV-1R | CDV1 | CDV1R | DV1intraflagellar transport 8112q24.13CV:PGCnp
DNM:Xu_2012
CompositeSet
54997TESCCHP3 | TSCtescalcin12q24.22CV:PGCnp
PMID:cooccur
23014FBXO21FBX21F-box protein 2112q24.22CV:PGCnp
283455KSR2-kinase suppressor of ras 212q24.22-q24.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
6249CLIP1CLIP | CLIP-170 | CLIP170 | CYLN1 | RSNCAP-Gly domain containing linker protein 112q24.3CV:PGCnp
DMG:Wockner_2014
121665SPPL3IMP2 | MDHV1887 | PRO4332 | PSH1 | PSL4signal peptide peptidase like 312q24.31CV:PGCnp
DMG:Wockner_2014
79720VPS37B-VPS37B, ESCRT-I subunit12q24.31CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
DMG:Wockner_2014
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
23141ANKLE2KIAA0692 | LEMD7 | Lem4 | MCPH16ankyrin repeat and LEM domain containing 212q24.33CV:PGCnp
DMG:Wockner_2014
2054STX2EPIM | EPM | STX2A | STX2B | STX2Csyntaxin 212q24.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
EXOCYTOSIS
11211FZD10CD350 | FZ-10 | Fz10 | FzE7 | hFz10frizzled class receptor 1012q24.33CV:GWASdb
CV:PGCnp
9201DCLK1CL1 | CLICK1 | DCAMKL1 | DCDC3A | DCLKdoublecortin like kinase 113q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
26960NBEABCL8B | LYST2neurobeachin13q13CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
51569UFM1BM-002 | C13orf20ubiquitin-fold modifier 113q13.3CV:PGCnp
DMG:Nishioka_2013
94240EPSTI1BRESI1epithelial stromal interaction 1 (breast)13q13.3CV:PGCnp
DMG:Wockner_2014
26586CKAP2LB1 | TMAP | se20-10cytoskeleton associated protein 213q14CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
55213RCBTB1CLLD7 | CLLL7 | GLPRCC1 and BTB domain containing protein 113q14CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
10161LPAR6ARWH1 | HYPT8 | LAH3 | P2RY5 | P2Y5lysophosphatidic acid receptor 613q14CV:PGCnp
10206TRIM13CAR | DLEU5 | LEU5 | RFP2 | RNF77tripartite motif containing 1313q14CV:PGCnp
144811LACC1C13orf31laccase domain containing 113q14.11CV:PGCnp
440138ALG11CDG1P | GT8ALG11, alpha-1,2-mannosyltransferase13q14.2DNM:Guipponi_2014
144983HNRNPA1L2-heterogeneous nuclear ribonucleoprotein A1-like 213q14.3CV:PGCnp
79758DHRS12SDR40C1dehydrogenase/reductase (SDR family) member 1213q14.3DMG:Wockner_2014
1910EDNRBABCDS | ET-B | ET-BR | ETB | ETB1 | ETBR | ETRB | HSCR | HSCR2 | WS4Aendothelin receptor type B13q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
54602NDFIP2N4WBP5ANedd4 family interacting protein 213q31.1CV:PGCnp
DMG:Wockner_2014
259232NALCNCLIFAHDD | CanIon | IHPRF | IHPRF1 | INNFD | VGCNL1 | bA430M15.1sodium leak channel, non-selective13q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
54841BIVM-basic, immunoglobulin-like variable motif containing13q33.1CV:PGCnp
DMG:Nishioka_2013
283ANGALS9 | HEL168 | RAA1 | RNASE4 | RNASE5angiogenin, ribonuclease, RNase A family, 514q11.1-q11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
26020LRP10LRP9 | MST087 | MSTP087LDL receptor related protein 1014q11.2CV:PGCnp
GSMA_I
PMID:cooccur
84932RAB2B-RAB2B, member RAS oncogene family14q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
GSMA_I
23428SLC7A8LAT2 | LPI-PC1solute carrier family 7 member 814q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
57820CCNB1IP1C14orf18 | HEI10cyclin B1 interacting protein 1, E3 ubiquitin protein ligase14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
161253REM2-RAS (RAD and GEM)-like GTP binding 214q11.2CV:PGCnp
GSMA_I
11154AP4S1AP47B | CLA20 | CLAPS4 | CPSQ6 | SPG52adaptor related protein complex 4 sigma 1 subunit14q12CV:PGCnp
GSMA_I
4792NFKBIAIKBA | MAD-3 | NFKBINFKB inhibitor alpha14q13CV:GWASdb
CV:PGCnp
Network
6655SOS2NS9SOS Ras/Rho guanine nucleotide exchange factor 214q21CV:PGCnp
DNM:Gulsuner_2013
4287ATXN3AT3 | ATX3 | JOS | MJD | MJD1 | SCA3ataxin 314q21Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
54813KLHL28BTBD5kelch like family member 2814q21.2CV:PGCnp
27109ATP5SATPW | FB | HSU79253ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B)14q21.3CV:PGCnp
DMG:Jaffe_2016
55172DNAAF2C14orf104 | CILD10 | KTU | PF13dynein (axonemal) assembly factor 214q21.3CV:PGCnp
Expression
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
645683RPL13AP3RPL13A_11_1370ribosomal protein L13a pseudogene 314q22.3CV:PGCnp
DMG:Wockner_2014
5926ARID4ARBBP-1 | RBBP1 | RBP-1 | RBP1AT-rich interaction domain 4A14q23.1CV:PGCnp
400224PLEKHD1UPF0639pleckstrin homology and coiled-coil domain containing D114q24.1CV:PGCnp
PMID:cooccur
53349ZFYVE1DFCP1 | PPP1R172 | SR3 | TAFF1 | ZNFN2A1zinc finger FYVE-type containing 114q24.2CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
4293MAP3K9MEKK9 | MLK1 | PRKE1mitogen-activated protein kinase kinase kinase 914q24.2CV:GWAScat
CV:GWASdb
CV:PGCnp
319139SNORD56BRNU56Bsmall nucleolar RNA, C/D box 56B14q24.2CV:PGCnp
1734DIO25DII | D2 | DIOII | SelY | TXDI2deiodinase, iodothyronine, type II14q24.2-q24.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
85439STON2STN2 | STNB | STNB2stonin 214q31.1CV:PGCnp
PMID:cooccur
1112FOXN3C14orf116 | CHES1 | PRO1635forkhead box N314q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7127TNFAIP2B94 | EXOC3L3TNF alpha induced protein 214q32CV:PGCnp
DEG:Zhao_2015
866SERPINA6CBGserpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 614q32.1CV:PGCnp
PMID:cooccur
79789CLMN-calmin (calponin-like, transmembrane)14q32.13CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
Expression
64919BCL11BATL1 | ATL1-alpha | ATL1-beta | ATL1-delta | ATL1-gamma | CTIP-2 | CTIP2 | RIT1 | ZNF856B | hRIT1-alphaB-cell CLL/lymphoma 11B14q32.2CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
122622ADSSL1-adenylosuccinate synthase like 114q32.33CV:PGCnp
DMG:Wockner_2014
113146AHNAK2C14orf78AHNAK nucleoprotein 214q32.33CV:PGCnp
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
6638SNRPNHCERN3 | PWCR | RT-LI | SM-D | SMN | SNRNP-N | SNURF-SNRPN | sm-Nsmall nuclear ribonucleoprotein polypeptide N15q11.2CNV:YES
CV:PGCnp
Network
PMID:cooccur
9990SLC12A6ACCPN | KCC3 | KCC3A | KCC3Bsolute carrier family 12 member 615q13CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
161725OTUD7AC15orf16 | C16ORF15 | CEZANNE2 | OTUD7OTU deubiquitinase 7A15q13.3CNV:YES
CV:PGCnp
Ascano FMRP targets
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
2038EPB42PA | SPH5erythrocyte membrane protein band 4.215q15-q21CV:PGCnp
Network
54866PPP1R14DCPI17-like | GBPI-1 | GBPI1protein phosphatase 1 regulatory inhibitor subunit 14D15q15.1CV:PGCnp
DNM:Xu_2012
CompositeSet
146050ZSCAN29ZNF690 | Zfp690zinc finger and SCAN domain containing 2915q15.3CV:PGCnp
9728SECISBP2LSBP2L | SLANSECIS binding protein 2 like15q21.1CV:PGCnpCompositeSet
Darnell FMRP targets
80031SEMA6D-semaphorin 6D15q21.1CV:PGCnp
GO_Annotation
256586LYSMD2-LysM domain containing 215q21.2CV:PGCnp
DMG:Wockner_2014
145781GCOM1GRINL1A | Gcom2 | MYZAP | MYZAP-POLR2M | gcomGRINL1A complex locus 115q21.3CV:GWAScat
CV:PGCnp
9488PIGBGPI-MT-III | PIG-Bphosphatidylinositol glycan anchor biosynthesis class B15q21.3CV:PGCnp
54629FAM63B-family with sequence similarity 63 member B15q21.3CV:PGCnp
PMID:cooccur
55075UACANUCLINGuveal autoantigen with coiled-coil domains and ankyrin repeats15q22-q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
114294LACTBG24 | MRPL56lactamase beta15q22.1CV:PGCnp
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
6642SNX1HsT17379 | VPS5sorting nexin 115q22.31CV:PGCnp
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
196996GRAMD2-GRAM domain containing 215q23CV:PGCnp
DMG:Wockner_2014
145957NRG4HRG4neuregulin 415q24.2CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
1464CSPG4HMW-MAA | MCSP | MCSPG | MEL-CSPG | MSK16 | NG2chondroitin sulfate proteoglycan 415q24.2CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
CompositeSet
597BCL2A1ACC-1 | ACC-2 | ACC1 | ACC2 | BCL2L5 | BFL1 | GRS | HBPA1BCL2 related protein A115q24.3CV:GWASdb
CV:PGCnp
23102TBC1D2B-TBC1 domain family member 2B15q24.3-q25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
400410ST20HCCS-1suppressor of tumorigenicity 2015q25.1CV:PGCnp
DMG:Wockner_2014
54993ZSCAN2ZFP29 | ZNF854zinc finger and SCAN domain containing 215q25.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
80765STARD5-StAR related lipid transfer domain containing 515q26CV:PGCnp
DMG:Nishioka_2013
23766GABARAPL3ATG8DGABA(A) receptors associated protein like 3, pseudogene15q26.1DMG:Wockner_2014
55784MCTP2-multiple C2 domains, transmembrane 215q26.2CV:GWASdb
CV:PGCnp
PMID:cooccur
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
22856CHSY1CHSY | CSS1 | ChSy-1 | TPBSchondroitin sulfate synthase 115q26.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
80213TM2D3BLP2TM2 domain containing 315q26.3CV:PGCnp
9961MVPLRP | VAULT1major vault protein16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
1428CRYMDFNA40 | THBPcrystallin mu16p12.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
STRUCTURAL PLASTICITY
CompositeSet
5347PLK1PLK | STPK13polo like kinase 116p12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
9738CCP110CP110 | Cep110centriolar coiled-coil protein 110kDa16p12.3CV:PGCnp
GSMA_IIE
23049SMG161E3.4 | ATX | LIPSMG1 phosphatidylinositol 3-kinase-related kinase16p12.3CV:GWASdb
CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8303SNN-stannin16p13CV:PGCnp
DEG:Maycox_2009
89927C16orf45-chromosome 16 open reading frame 4516p13.11CNV:YES
CV:PGCnp
GSMA_IIE
729993SHISA9CKAMP44shisa family member 916p13.12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIE
2072ERCC4ERCC11 | FANCQ | RAD1 | XFEPS | XPFexcision repair cross-complementation group 416p13.12CV:PGCnp
GSMA_IIE
92017SNX29A-388D4.1 | RUNDC2Asorting nexin 2916p13.13-p13.12CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
29035C16orf72PRO0149chromosome 16 open reading frame 7216p13.2CV:GWASdb
CV:PGCnp
PMID:cooccur
2903GRIN2AEPND | FESD | GluN2A | LKS | NMDAR2A | NR2Aglutamate ionotropic receptor NMDA type subunit 2A16p13.2Association
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2013EMP2XMPepithelial membrane protein 216p13.2CV:PGCnp
DMG:Montano_2016
23589CARHSP1CRHSP-24 | CSDC1calcium regulated heat stable protein 116p13.2CV:PGCnp
5493PPL-periplakin16p13.3CV:PGCnp
PMID:cooccur
64428NARFLHPRN | IOP1 | LET1L | PRNnuclear prelamin A recognition factor-like16p13.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
91151TIGD7Sanchotigger transposable element derived 716p13.3DNM:Guipponi_2014Ascano FMRP targets
10232MSLNMPF | SMRPmesothelin16p13.3CV:PGCnp
DMG:Wockner_2014
4716NDUFB10PDSWNADH:ubiquinone oxidoreductase subunit B1016p13.3NetworkCompositeSet
146223CMTM4CKLFSF4CKLF like MARVEL transmembrane domain containing 416q21-q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
92154MTSS1LABBA-1metastasis suppressor 1-like16q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
8824CES2CE-2 | CES2A1 | PCE-2 | iCEcarboxylesterase 216q22.1CV:PGCnp
146456TMED6PRO34237 | SPLL9146 | p24g5transmembrane p24 trafficking protein 616q22.1CV:PGCnp
3931LCAT-lecithin-cholesterol acyltransferase16q22.1CV:PGCnp
1506CTRLCTRL1chymotrypsin-like16q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
80262C16orf70C16orf6 | LIN10 | lin-10chromosome 16 open reading frame 7016q22.1CV:PGCnp
PMID:cooccur
23659PLA2G15ACS | GXVPLA2 | LLPL | LPLA2 | LYPLA3phospholipase A2 group XV16q22.1CV:PGCnpAscano FMRP targets
7571ZNF23KOX16 | ZNF359 | ZNF612 | Zfp612zinc finger protein 2316q22.2CV:PGCnp
DMG:Nishioka_2013
10164CHST4GST3 | GlcNAc6ST2 | HECGLCNAC6ST | LSSTcarbohydrate (N-acetylglucosamine 6-O) sulfotransferase 416q22.2CV:PGCnp
80790CMIPTCMIPc-Maf inducing protein16q23CV:PGCnp
DMG:Wockner_2014
8139GANGAN1 | KLHL16gigaxonin16q24.1CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
79786KLHL36C16orf44kelch like family member 3616q24.1CV:PGCnp
DMG:Wockner_2014
29123ANKRD11ANCO-1 | ANCO1 | LZ16 | T13ankyrin repeat domain 1116q24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6720SREBF1SREBP-1c | SREBP1 | SREBP1a | bHLHd1sterol regulatory element binding transcription factor 117p11.2CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
146691TOM1L2-target of myb1 like 2 membrane trafficking protein17p11.2CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
147166TRIM16LTRIM70tripartite motif containing 16-like17p11.2CV:PGCnp
201163FLCNBHD | FLCLfolliculin17p11.2CV:PGCnp
DEG:Zhao_2015
10517FBXW10Fbw10 | HREP | SM25H2 | SM2SH2F-box and WD repeat domain containing 1017p12CV:PGCnp
968CD68GP110 | LAMP4 | SCARD1CD68 molecule17p13DEG:Sanders_2013
DMG:vanEijk_2014
PMID:cooccur
409ARRB2ARB2 | ARR2 | BARR2arrestin, beta 217p13CV:PGCnp
DNM:Guipponi_2014
PMID:cooccur
58191CXCL16CXCLG16 | SR-PSOX | SRPSOXC-X-C motif chemokine ligand 1617p13PMID:cooccur
11337GABARAPATG8A | GABARAP-a | MM46GABA(A) receptor-associated protein17p13.1CV:PGCnp
GO_Annotation
PMID:cooccur
9196KCNAB3AKR6A9 | KCNA3.1B | KCNA3B | KV-BETA-3potassium voltage-gated channel subfamily A regulatory beta subunit 317p13.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
1366CLDN7CEPTRL2 | CLDN-7 | CPETRL2 | Hs.84359 | claudin-1claudin 717p13.1CV:PGCnp
GO_Annotation
54478FAM64ACATS | RCS1family with sequence similarity 64 member A17p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7442TRPV1VR1transient receptor potential cation channel subfamily V member 117p13.2CV:PGCnp
DEG:Zhao_2015
Network
PMID:cooccur
406921MIR132MIRN132 | miRNA132 | mir-132microRNA 13217p13.3CV:PGCnp
PMID:cooccur
5176SERPINF1EPC-1 | OI12 | OI6 | PEDF | PIG35serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 117p13.3CV:PGCnp
GO_Annotation
443ASPAACY2 | ASPaspartoacylase17p13.3CV:PGCnp
PMID:cooccur
727910TLCD2-TLC domain containing 217p13.3CV:PGCnp
DMG:Wockner_2014
124935SLC43A2LAT4solute carrier family 43 member 217p13.3CV:PGCnp
DMG:Wockner_2014
400566C17orf97CK20 | LIAT1chromosome 17 open reading frame 9717p13.3CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
4843NOS2HEP-NOS | INOS | NOS | NOS2Anitric oxide synthase 217q11.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
84081NSRP1CCDC55 | HSPC095 | NSrp70nuclear speckle splicing regulatory protein 117q11.2CV:PGCnp
PMID:cooccur
5193PEX12PAF-3 | PBD3Aperoxisomal biogenesis factor 1217q12CV:PGCnp
DMG:Jaffe_2016
619505SNORA21ACA21small nucleolar RNA, H/ACA box 2117q12CV:PGCnp
414059TBC1D3BPRC17 | TBC1D3I | TBC1D3LTBC1 domain family member 3B17q12CNV:YES
CV:PGCnp
51195RAPGEFL1Link-GEFIIRap guanine nucleotide exchange factor like 117q21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
65266WNK4PHA2B | PRKWNK4WNK lysine deficient protein kinase 417q21.2GO_Annotation
PMID:cooccur
162427FAM134C-family with sequence similarity 134 member C17q21.2CV:PGCnp
DMG:Jaffe_2016
28511NKIRAS2KBRAS2 | kappaB-Ras2NFKB inhibitor interacting Ras-like 217q21.2DEG:Zhao_2015
3866KRT15CK15 | K15 | K1COkeratin 1517q21.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
3886KRT35HA5 | Ha-5 | KRTHA5 | hHa5keratin 3517q21.2CV:GWASdb
CV:PGCnp
4779NFE2L1LCR-F1 | NRF1 | TCF11nuclear factor, erythroid 2 like 117q21.3CV:PGCnp
10614HEXIM1CLP1 | EDG1 | HIS1 | MAQ1hexamethylene bis-acetamide inducible 117q21.31CV:PGCnp
DMG:Jaffe_2016
2535FZD2Fz2 | fz-2 | fzE2 | hFz2frizzled class receptor 217q21.31CV:PGCnp
DMG:Jaffe_2016
78995C17orf53-chromosome 17 open reading frame 5317q21.31CV:PGCnp
DMG:Jaffe_2016
379ARL4DARF4L | ARL6ADP ribosylation factor like GTPase 4D17q21.31CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
23131GPATCH8GPATC8 | KIAA0553G-patch domain containing 817q21.31CV:PGCnp
474170LRRC37A2LRRC37leucine-rich repeat containing 37 member A217q21.31CV:PGCnp
5164PDK2PDHK2 | PDKIIpyruvate dehydrogenase kinase 217q21.33Network
55040EPN3-epsin 317q21.33CV:PGCnp
DMG:Wockner_2014
55181SMG8C17orf71SMG8 nonsense mediated mRNA decay factor17q22CV:PGCnp
388403YPEL2FKSG4yippee like 217q22CV:PGCnp
8493PPM1DPP2C-DELTA | WIP1protein phosphatase, Mg2+/Mn2+ dependent 1D17q23.2DMG:Nishioka_2013
DMG:Wockner_2014
440452TBC1D3P2-TBC1 domain family member 3 pseudogene 217q23.2CV:PGCnp
9902MRC2CD280 | CLEC13E | ENDO180 | UPARAPmannose receptor, C type 217q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
26115TANC2ROLSA | rolstetratricopeptide repeat, ankyrin repeat and coiled-coil containing 217q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
27092CACNG4-calcium voltage-gated channel auxiliary subunit gamma 417q24CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
CompositeSet
Potential synaptic genes
350APOHB2G1 | B2GP1 | BGapolipoprotein H17q24.2CV:PGCnp
PMID:cooccur
2688GH1GH | GH-N | GHB5 | GHN | IGHD1B | hGH-Ngrowth hormone 117q24.2CV:PGCnp
Network
PMID:cooccur
55062WIPI1ATG18 | ATG18A | WIPI49WD repeat domain, phosphoinositide interacting 117q24.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
5608MAP2K6MAPKK6 | MEK6 | MKK6 | PRKMK6 | SAPKK-3 | SAPKK3mitogen-activated protein kinase kinase 617q24.3CV:PGCnp
10458BAIAP2BAP2 | FLAF3 | IRSP53BAI1 associated protein 217q25CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
23210JMJD6PSR | PTDSR | PTDSR1jumonji domain containing 617q25CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
Chromatin Remodeling Genes
79637ARMC7-armadillo repeat containing 717q25.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
23580CDC42EP4BORG4 | CEP4 | KAIA1777CDC42 effector protein 417q25.1CV:PGCnp
PMID:cooccur
3993LLGL2HGL | Hugl-2 | LGL2lethal giant larvae homolog 2, scribble cell polarity complex component17q25.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
57602USP36DUB1ubiquitin specific peptidase 3617q25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
57674RNF213ALO17 | C17orf27 | KIAA1618 | MYMY2 | MYSTR | NET57ring finger protein 21317q25.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
2774GNALDYT25G protein subunit alpha L18p11.22-p11.21Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9663LPIN2-lipin 218p11.31CV:PGCnp
CV:PheWAS
CompositeSet
Darnell FMRP targets
9331B4GALT6B4Gal-T6 | beta4Gal-T6UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 618q11CV:PGCnp
PMID:cooccur
114876OSBPL1AORP-1 | ORP1 | OSBPL1Boxysterol binding protein like 1A18q11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6875TAF4BSPGF13 | TAF2C2 | TAFII105TATA-box binding protein associated factor 4b18q11.2CV:PGCnp
DMG:Wockner_2014
1825DSC3CDHF3 | DSC | DSC1 | DSC2 | DSC4 | HT-CPdesmocollin 318q12.1CV:PGCnp
51224TCEB3BELOA2 | HsT832 | TCEB3Ltranscription elongation factor B subunit 3B18q21.1CV:PGCnp
26040SETBP1MRD29 | SEBSET binding protein 118q21.1CV:PGCnp
DMG:Wockner_2014
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
5205ATP8B1ATPIC | BRIC | FIC1 | ICP1 | PFIC | PFIC1ATPase phospholipid transporting 8B118q21.31CV:PGCnp
CV:PheWAS
54877ZCCHC2C18orf49zinc finger CCHC-type containing 218q21.33CV:GWAScat
CV:PGCnp
220441RNF152-ring finger protein 15218q21.33CV:PGCnp
Expression
55628ZNF407-zinc finger protein 40718q23CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
7675ZNF121D19S204 | ZHC32 | ZNF20zinc finger protein 12119pCV:PGCnp
DMG:Wockner_2014
51477ISYNA1INO1 | INOS | IPS | IPS 1 | IPS-1inositol-3-phosphate synthase 119p13.11CV:PGCnp
374882TMEM205UNQ501transmembrane protein 20519p13.2DMG:Wockner_2014
79088ZNF426K-RBPzinc finger protein 42619p13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
90589ZNF625-zinc finger protein 62519p13.2CV:PGCnp
DMG:Nishioka_2013
284391ZNF844-zinc finger protein 84419p13.2CV:PGCnp
DNM:Guipponi_2014
55527FEM1AEPRAPfem-1 homolog a (C. elegans)19p13.3CV:PGCnp
DMG:Nishioka_2013
3643INSRCD220 | HHF5insulin receptor19p13.3-p13.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Ascano FMRP targets
2077ERFCRS4 | PE-2 | PE2ETS2 repressor factor19q13CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
5655KLK10NES1 | PRSSL1kallikrein related peptidase 1019q13DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
58510PRODH2HSPOX1 | HYPDHproline dehydrogenase (oxidase) 219q13.1GO_Annotation
PMID:cooccur
163081ZNF567-zinc finger protein 56719q13.12CV:PGCnp
57711ZNF529-zinc finger protein 52919q13.13CV:PGCnp
DMG:Wockner_2014
344APOC2APO-CII | APOC-IIapolipoprotein C-II19q13.2CV:PGCnp
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
29946SERTAD3RBT1SERTA domain containing 319q13.2DMG:Jaffe_2016
4059BCAMAU | CD239 | LU | MSK19basal cell adhesion molecule (Lutheran blood group)19q13.2DMG:Wockner_2014
5296PIK3R2MPPH | MPPH1 | P85B | p85 | p85-BETAphosphoinositide-3-kinase regulatory subunit 219q13.2-q13.4CV:PGCnp
DMG:Wockner_2014
Network
55769ZNF83HPF1 | ZNF816Bzinc finger protein 8319q13.3CV:PGCnp
DMG:Wockner_2014
6820SULT2B1HSST2sulfotransferase family 2B member 119q13.3CV:PGCnp
DMG:Wockner_2014
7772ZNF229-zinc finger protein 22919q13.31CV:PGCnp
DNM:Xu_2012
CompositeSet
342909ZNF284ZNF284Lzinc finger protein 28419q13.31DMG:Jaffe_2016
5971RELBI-REL | IREL | REL-Bv-rel avian reticuloendotheliosis viral oncogene homolog B19q13.32CV:PGCnp
GO_Annotation
Network
9266CYTH2ARNO | CTS18 | CTS18.1 | PSCD2 | PSCD2L | SEC7L | Sec7p-L | Sec7p-likecytohesin 219q13.33DMG:Wockner_2014
Network
9422ZNF264-zinc finger protein 26419q13.4DMG:Jaffe_2016
7693ZNF134pHZ-15zinc finger protein 13419q13.4CV:PGCnp
DMG:Jaffe_2016
10520ZNF211C2H2-25 | CH2H2-25 | ZNF-25 | ZNFC25zinc finger protein 21119q13.4CV:PGCnp
DMG:Wockner_2014
90317ZNF616-zinc finger protein 61619q13.41CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
84765ZNF577-zinc finger protein 57719q13.41CV:PGCnp
9668ZNF432-zinc finger protein 43219q13.41CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
147798TMC4-transmembrane channel like 419q13.42CV:PGCnp
DMG:Jaffe_2016
91664ZNF845-zinc finger protein 84519q13.42CV:PGCnp
DMG:Jaffe_2016
284306ZNF547-zinc finger protein 54719q13.43CV:PGCnp
DMG:Jaffe_2016
284309ZNF776-zinc finger protein 77619q13.43DMG:Jaffe_2016
7482WNT2BWNT13wingless-type MMTV integration site family member 2B1p13CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
126868MAB21L3C1orf161mab-21-like 3 (C. elegans)1p13.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
54879ST7LFAM4B | ST7R | STLRsuppression of tumorigenicity 7 like1p13.2CV:PGCnp
GSMA_I
4343MOV10fSAP113 | gb110Mov10 RISC complex RNA helicase1p13.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
79961DENND2D-DENN domain containing 2D1p13.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
2944GSTM1GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1glutathione S-transferase mu 11p13.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
10451VAV3-vav guanine nucleotide exchange factor 31p13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1435CSF1CSF-1 | MCSFcolony stimulating factor 11p13.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
1952CELSR2ADGRC2 | CDHF10 | EGFL2 | Flamingo1 | MEGF3cadherin EGF LAG seven-pass G-type receptor 21p21CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
55599RNPC3RBM40 | RNP | SNRNP65RNA binding region (RNP1, RRM) containing 31p21CV:PGCnp
DMG:Jaffe_2016
163786SASS6MCPH14 | SAS-6 | SAS6SAS-6 centriolar assembly protein1p21.2CV:PGCnp
DMG:Jaffe_2016
148534TMEM56-transmembrane protein 561p21.3CV:PGCnp
DMG:Wockner_2014
1486CTBSCTBchitobiase1p22CV:PGCnp
PMID:cooccur
94236DNAJA1P5HEJ1DnaJ heat shock protein family (Hsp40) member A1 pseudogene 51p22CV:PGCnp
2634GBP2-guanylate binding protein 21p22.2CV:PGCnp
DEG:Sanders_2013
58511DNASE2BDLADdeoxyribonuclease II beta1p22.3CV:PGCnp
DNM:Gulsuner_2013
55283MCOLN3TRP-ML3 | TRPML3mucolipin 31p22.3CV:PGCnp
1491CTH-cystathionine gamma-lyase1p31.1CV:GWAScat
CV:PGCnp
GSMA_IIA
PMID:cooccur
83941TM2D1BBPTM2 domain containing 11p31.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
9829DNAJC6DJC6 | PARK19DnaJ heat shock protein family (Hsp40) member C61p31.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
57685CACHD1-cache domain containing 11p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
Ascano FMRP targets
4774NFIACTF | NF-I/A | NF1-A | NFI-A | NFI-Lnuclear factor I/A1p31.3-p31.2CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
10420TESK2-testis-specific kinase 21p32CV:PGCnp
DMG:Jaffe_2016
1376CPT2CPT1 | CPTASE | IIAE4carnitine palmitoyltransferase 21p32CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
51361HOOK1HK1hook microtubule-tethering protein 11p32.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
23648SSBP3CSDP | SSDP | SSDP1single stranded DNA binding protein 31p32.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
4520MTF1MTF-1 | ZRFmetal-regulatory transcription factor 11p33CV:PGCnp
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
3633INPP5B5PTaseinositol polyphosphate-5-phosphatase B1p34CV:PGCnp
64121RRAGCGTR2 | RAGC | TIB929Ras related GTP binding C1p34CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7388UQCRHQCR6 | UQCR8ubiquinol-cytochrome c reductase hinge protein1p34.1CV:PGCnp
728621CCDC30PFD6L | PFDN6Lcoiled-coil domain containing 301p34.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
200172SLFNL1-schlafen like 11p34.2CV:PGCnp
DMG:Wockner_2014
54933RHBDL2RRP2rhomboid, veinlet-like 2 (Drosophila)1p34.3CV:PGCnp
GO_Annotation
57648KIAA1522-KIAA15221p35.1CV:PGCnp
2140EYA3-EYA transcriptional coactivator and phosphatase 31p36CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
65018PINK1BRPK | PARK6PTEN induced putative kinase 11p36DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
57822GRHL3SOM | TFCP2L4 | VWS2grainyhead like transcription factor 31p36.11CV:GWASdb
CV:PGCnp
115572FAM46B-family with sequence similarity 46 member B1p36.11CV:PGCnp
50809HP1BP3HP1-BP74 | HP1BP74heterochromatin protein 1 binding protein 31p36.12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
57185NIPAL3DJ462O23.2 | NPAL3NIPA like domain containing 31p36.12-p35.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
3399ID3HEIR-1 | bHLHb25inhibitor of DNA binding 3, HLH protein1p36.13-p36.12CV:PGCnp
PMID:cooccur
978CDACDDcytidine deaminase1p36.2-p35CV:PGCnp
DMG:Montano_2016
PMID:cooccur
55092TMEM51C1orf72transmembrane protein 511p36.21CV:GWASdb
CV:PGCnp
23254KAZNKAZkazrin, periplakin interacting protein1p36.21CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
26232FBXO2FBG1 | FBX2 | Fbs1 | NFB42 | OCP1F-box protein 21p36.22CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
80176SPSB1SSB-1 | SSB1splA/ryanodine receptor domain and SOCS box containing 11p36.22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
8863PER3GIG13period circadian clock 31p36.23Association
CV:PGCnp
PMID:cooccur
8514KCNAB2AKR6A5 | HKvbeta2 | HKvbeta2.1 | HKvbeta2.2 | KCNA2B | KV-BETA-2potassium voltage-gated channel subfamily A regulatory beta subunit 21p36.3CV:PGCnp
DMG:Wockner_2014
EXCITABILITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
388585HES5bHLHb38hes family bHLH transcription factor 51p36.32CV:PGCnp
GO_Annotation
PMID:cooccur
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
8515ITGA10PRO827integrin subunit alpha 101q21CNV:YES
GSMA_I
GSMA_IIA
7059THBS3TSP3thrombospondin 31q21CV:PGCnp
GSMA_I
GSMA_IIA
6279S100A860B8AG | CAGA | CFAG | CGLA | CP-10 | L1Ag | MA387 | MIF | MRP8 | NIF | P8S100 calcium binding protein A81q21GSMA_I
GSMA_IIA
PMID:cooccur
58497PRUNEDRES-17 | DRES17 | HTCD37prune exopolyphosphatase1q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
1942EFNA1B61 | ECKLG | EFL1 | EPLG1 | LERK-1 | LERK1 | TNFAIP4ephrin-A11q21-q22CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
6707SPRR3-small proline rich protein 31q21-q22DMG:Wockner_2014
GSMA_I
GSMA_IIA
200035NUDT17-nudix hydrolase 171q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
9939RBM8ABOV-1A | BOV-1B | BOV-1C | C1DELq21.1 | DEL1q21.1 | MDS014 | RBM8 | RBM8B | TAR | Y14 | ZNRP | ZRNP1RNA binding motif protein 8A1q21.1CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
55204GOLPH3LGPP34Rgolgi phosphoprotein 3 like1q21.3CV:PGCnp
GSMA_I
GSMA_IIA
90780PYGO21190004M21Rikpygopus family PHD finger 21q21.3CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
55793FAM63A-family with sequence similarity 63 member A1q21.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
GSMA_IIA
2224FDPSFPPS | FPS | POROK9farnesyl diphosphate synthase1q22CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
2153F5FVL | PCCF | RPRGL1 | THPH2coagulation factor V1q23CV:PGCnp
PMID:cooccur
5087PBX1-pre-B-cell leukemia homeobox 11q23CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
477ATP1A2FHM2 | MHP2ATPase Na+/K+ transporting subunit alpha 21q23.2CV:GWAScat
CV:PGCnp
GSMA_I
GSMA_IIA
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
57216VANGL2LPP1 | LTAP | STB1 | STBM | STBM1VANGL planar cell polarity protein 21q23.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
126823KLHDC9KARCA1kelch domain containing 91q23.3DMG:Jaffe_2016
GSMA_IIA
6675UAP1AGX | AGX1 | AGX2 | SPAG2UDP-N-acetylglucosamine pyrophosphorylase 11q23.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
9462RASAL2NGAPRAS protein activator like 21q24CV:PGCnp
DMG:Nishioka_2013
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
81563C1orf21PIG13chromosome 1 open reading frame 211q25CV:PGCnp
DMG:Jaffe_2016
126859AXDND1C1orf125axonemal dynein light chain domain containing 11q25.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
259266ASPMASP | Calmbp1 | MCPH5abnormal spindle microtubule assembly1q31CV:PGCnp
GO_Annotation
PMID:cooccur
7832BTG2PC3 | TIS21BTG family member 21q32CV:PGCnp
PMID:cooccur
5317PKP1B6Pplakophilin 11q32CV:PGCnp
DMG:Wockner_2014
23380SRGAP2ARHGAP34 | FNBP2 | SRGAP2A | SRGAP3SLIT-ROBO Rho GTPase activating protein 21q32.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
81788NUAK2SNARKNUAK family kinase 21q32.1CV:PGCnp
DMG:Wockner_2014
5877RABIFMSS4 | RASGFR3 | RASGRF3RAB interacting factor1q32.1DMG:Jaffe_2016INTRACELLULAR TRAFFICKING
376693RPS10P7RPS10_2_147ribosomal protein S10 pseudogene 71q32.1CV:PGCnp
DMG:Jaffe_2016
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
5362PLXNA2OCT | PLXN2plexin A21q32.2Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
54583EGLN1C1orf12 | ECYT3 | HALAH | HIF-PH2 | HIFPH2 | HPH-2 | HPH2 | PHD2 | SM20 | ZMYND6egl-9 family hypoxia-inducible factor 11q42.1CV:PGCnp
PMID:cooccur
2052EPHX1EPHX | EPOX | HYL1 | MEHepoxide hydrolase 11q42.1CV:PGCnp
DMG:Wockner_2014
23219FBXO28CENP-30 | Fbx28F-box protein 281q42.11CV:PGCnp
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3775KCNK1DPK | HOHO | K2P1 | K2p1.1 | KCNO1 | TWIK-1 | TWIK1potassium two pore domain channel subfamily K member 11q42.2CV:PGCnp
DMG:Wockner_2014
Expression
128061C1orf131-chromosome 1 open reading frame 1311q42.2CV:PGCnp
DMG:Jaffe_2016
7678ZNF124HZF-16 | HZF16 | ZK7zinc finger protein 1241q44CV:GWAScat
CV:PGCnp
163882CNSTC1orf71 | PPP1R64consortin, connexin sorting protein1q44CV:PGCnp
DMG:Jaffe_2016
4821NKX2-2NKX2.2 | NKX2BNK2 homeobox 220p11.22CV:PGCnp
GO_Annotation
PMID:cooccur
23236PLCB1EIEE12 | PI-PLC | PLC-154 | PLC-I | PLC-beta-1 | PLC154 | PLCB1A | PLCB1Bphospholipase C beta 120p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
55304SPTLC3C20orf38 | LCB2B | LCB3 | SPT3 | SPTLC2L | dJ718P11 | dJ718P11.1 | hLCB2bserine palmitoyltransferase long chain base subunit 320p12.1CV:GWASdb
CV:PGCnp
GSMA_I
60493FASTKD5dJ1187M17.5FAST kinase domains 520p13DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
2036EPB41L14.1N | MRD11erythrocyte membrane protein band 4.1-like 120q11.2-q12CV:PGCnp
DNM:Fromer_2014
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11264PXMP4PMP24peroxisomal membrane protein 420q11.22CV:PGCnp
DMG:Nishioka_2013
58476TP53INP2C20orf110 | DOR | PINH | dJ1181N3.1tumor protein p53 inducible nuclear protein 220q11.22CV:PGCnp
DMG:vanEijk_2014
83737ITCHADMFD | AIF4 | AIP4 | NAPP1itchy E3 ubiquitin protein ligase20q11.22CV:PGCnp
PMID:cooccur
81610FAM83DC20orf129 | CHICA | dJ616B8.3family with sequence similarity 83 member D20q11.23CV:PGCnp
84181CHD6CHD-6 | CHD5 | RIGBchromodomain helicase DNA binding protein 620q12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
128486FITM2C20orf142 | Fit2 | dJ881L22.2fat storage-inducing transmembrane protein 220q13.12CV:PGCnp
DMG:Jaffe_2016
Expression
63935PCIF1C20orf67 | PPP1R121PDX1 C-terminal inhibiting factor 120q13.12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9825SPATA2PD1 | PPP1R145 | tamospermatogenesis associated 220q13.13DMG:Nishioka_2013
128553TSHZ2C20orf17 | OVC10-2 | TSH2 | ZABC2 | ZNF218teashirt zinc finger homeobox 220q13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
284756C20orf197-chromosome 20 open reading frame 19720q13.33DNM:Fromer_2014CompositeSet
11083DIDO1BYE1 | C20orf158 | DATF-1 | DATF1 | DIDO2 | DIDO3 | DIO-1 | DIO1 | dJ885L7.8death inducer-obliterator 120q13.33CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
54149C21orf91C21orf14 | C21orf38 | CSSG1 | EURL | YG81chromosome 21 open reading frame 9121q21.1CV:PGCnp
337973KRTAP19-6KAP19.6keratin associated protein 19-621q22.1CV:PGCnp
3455IFNAR2IFN-R | IFN-alpha-REC | IFNABR | IFNARB | IMD45interferon alpha and beta receptor subunit 221q22.11CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
54014BRWD1C21orf107 | DCAF19 | N143 | WDR9bromodomain and WD repeat domain containing 121q22.2CV:PGCnp
DEG:Sanders_2013
DMG:Nishioka_2013
Expression
6285S100BNEF | S100 | S100-B | S100betaS100 calcium binding protein B21q22.3Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
25966C2CD2C21orf25 | C21orf258 | TMEM24LC2 calcium-dependent domain containing 221q22.3CV:PGCnp
51816CECR1ADA2 | ADGF | IDGFL | PAN | SNEDScat eye syndrome chromosome region, candidate 122q11.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
6576SLC25A1CTP | D2L2AD | SEA | SLC20A3solute carrier family 25 member 122q11.21CNV:YES
CV:PGCnp
DNM:Gulsuner_2013
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
8220DGCR14DGCR13 | DGS-H | DGS-I | DGSH | DGSI | ES2 | Es2elDiGeorge syndrome critical region gene 1422q11.21|22q11.2Association
CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
23780APOL2APOL-II | APOL3apolipoprotein L222q12CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
23760PITPNBPI-TP-beta | PtdInsTP | VIB1Bphosphatidylinositol transfer protein beta22q12.1CV:PGCnp
Expression
GSMA_I
150274HSCBDNAJC20 | HSC20 | JAC1HscB mitochondrial iron-sulfur cluster co-chaperone22q12.1CV:PGCnp
GSMA_I
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
266629SEC14L3TAP2SEC14 like lipid binding 322q12.2CV:PGCnp
GSMA_I
8508NIPSNAP1-nipsnap homolog 1 (C. elegans)22q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
113791PIK3IP1HGFL | hHGFL(S)phosphoinositide-3-kinase interacting protein 122q12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3985LIMK2-LIM domain kinase 222q12.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
91445RNF185-ring finger protein 18522q12.2CV:PGCnp
GSMA_I
7078TIMP3HSMRK222 | K222 | K222TA2 | SFDTIMP metallopeptidase inhibitor 322q12.3Association
CV:PGCnp
GSMA_I
57591MKL1BSAC | MAL | MRTF-Amegakaryoblastic leukemia (translocation) 122q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
10043TOM1-target of myb1 membrane trafficking protein22q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
23492CBX7-chromobox 722q13.1CV:PGCnp
DMG:Nishioka_2013
25809TTLL1C22orf7 | HS323M22Btubulin tyrosine ligase like 122q13.1CV:PGCnp
DMG:Jaffe_2016
10521DDX17P72 | RH70DEAD-box helicase 1722q13.1CV:PGCnp
DMG:Nishioka_2013
8398PLA2G6CaI-PLA2 | GVI | INAD1 | IPLA2-VIA | NBIA2 | NBIA2A | NBIA2B | PARK14 | PLA2 | PNPLA9 | iPLA2 | iPLA2betaphospholipase A2 group VI22q13.1Association
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
6767ST13AAG2 | FAM10A1 | FAM10A4 | HIP | HOP | HSPABP | HSPABP1 | P48 | PRO0786 | SNC6suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)22q13.2CV:PGCnp
PMID:cooccur
10766TOB2TOB4 | TOBL | TROB2transducer of ERBB2, 222q13.2CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
9620CELSR1ADGRC1 | CDHF9 | FMI2 | HFMI2 | ME2cadherin EGF LAG seven-pass G-type receptor 122q13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Ascano FMRP targets
400935IL17REL-interleukin 17 receptor E-like22q13.33CV:PGCnp
29781NCAPH2CAPH2non-SMC condensin II complex subunit H222q13.33CV:PGCnpAscano FMRP targets
23209MLC1LVM | MLC | VLmegalencephalic leukoencephalopathy with subcortical cysts 122q13.33Association
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
23654PLXNB2MM1 | Nbla00445 | PLEXB2 | dJ402G11.3plexin B222q13.33CV:PGCnp
GO_Annotation
Ascano FMRP targets
7844RNF103HKF-1 | KF-1 | KF1 | ZFP-103 | ZFP103ring finger protein 1032p11.2CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GO_Annotation
GSMA_I
55818KDM3AJHDM2A | JHMD2A | JMJD1 | JMJD1A | TSGAlysine demethylase 3A2p11.2CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
Chromatin Remodeling Genes
3099HK2HKII | HXK2hexokinase 22p13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
5966RELC-Relv-rel avian reticuloendotheliosis viral oncogene homolog2p13-p12CV:GWASdb
CV:PGCnp
CV:PheWAS
Network
PMID:cooccur
56603CYP26B1CYP26A2 | P450RAI-2 | P450RAI2 | RHFCAcytochrome P450 family 26 subfamily B member 12p13.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
23233EXOC6BSEC15B | SEC15L2exocyst complex component 6B2p13.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
4211MEIS1-Meis homeobox 12p14CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23177CEP68KIAA0582centrosomal protein 68kDa2p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10936GPR75GPRchr2 | WI31133G protein-coupled receptor 752p16CV:PGCnp
129285PPP1R21CCDC128 | KLRAQ1protein phosphatase 1 regulatory subunit 212p16.3CV:GWAScat
CV:GWASdb
CV:PGCnp
5581PRKCEPKCE | nPKC-epsilonprotein kinase C epsilon2p21CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
84450ZNF512-zinc finger protein 5122p23CV:GWASdb
CV:PGCnp
245711SPDYARINGO3 | RINGOA | SPDY1 | SPY1speedy/RINGO cell cycle regulator family member A2p23.2CV:PGCnp
79745CLIP4RSNL2CAP-Gly domain containing linker protein family member 42p23.2CV:PGCnp
PMID:cooccur
64080RBKSRBSKribokinase2p23.3CV:PGCnp
DMG:Wockner_2014
130502TTC32-tetratricopeptide repeat domain 322p24.1CV:PGCnp
DMG:Jaffe_2016
9781RNF144ARNF144 | UBCE7IP4ring finger protein 144A2p25.2CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
23040MYT1LMRD39 | NZF1 | ZC2HC4Bmyelin transcription factor 1 like2p25.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
93082NEURL3LINCRneuralized E3 ubiquitin protein ligase 32q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
200407CREG2-cellular repressor of E1A stimulated genes 22q11.2CV:PGCnp
GSMA_I
3899AFF3LAF4 | MLLT2-likeAF4/FMR2 family member 32q11.2-q12CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
10018BCL2L11BAM | BIM | BODBCL2 like 112q13CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
84910TMEM87B-transmembrane protein 87B2q13CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
CompositeSet
205251LINC00116NCRNA00116long intergenic non-protein coding RNA 1162q13CV:PGCnp
29842TFCP2L1CRTR1 | LBP-9 | LBP9transcription factor CP2-like 12q14CV:PGCnp
DNM:McCarthy_2014
Expression
GSMA_I
GSMA_IIA
100151683RNU4ATACMOPD1 | RFMN | RNU4ATAC1 | TALS | U4ATACRNA, U4atac small nuclear (U12-dependent splicing)2q14.2PMID:cooccur
10746MAP3K2MEKK2 | MEKK2Bmitogen-activated protein kinase kinase kinase 22q14.3GSMA_I
GSMA_IIA
129684CNTNAP5caspr5contactin associated protein-like 52q14.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
6332SCN7ANaG | Nav2.1 | Nav2.2 | SCN6Asodium voltage-gated channel alpha subunit 72q21-q23CV:PGCnp
GSMA_IIA
PMID:cooccur
905CCNT2CYCT2cyclin T22q21.3CV:PGCnp
GSMA_I
GSMA_IIA
339745SPOPLBTBD33speckle type BTB/POZ protein like2q22.1CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
55777MBD5MRD1methyl-CpG binding domain protein 52q23.1CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
64135IFIH1AGS7 | Hlcd | IDDM19 | MDA-5 | MDA5 | RLR-2 | SGMRT1interferon induced, with helicase C domain 12q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
6335SCN9AETHA | FEB3B | GEFSP7 | HSAN2D | NE-NA | NENA | Nav1.7 | PN1 | SFNPsodium voltage-gated channel alpha subunit 92q24CV:PGCnp
GSMA_IIA
EXCITABILITY
130940CCDC148-coiled-coil domain containing 1482q24.1CV:PGCnp
GSMA_IIA
10010TANKI-TRAF | ITRAF | TRAF2TRAF family member associated NFKB activator2q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
Network
PMID:cooccur
27347STK39DCHT | PASK | SPAKserine/threonine kinase 392q24.3CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
2571GAD1CPSQ1 | GAD | SCPglutamate decarboxylase 12q31Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
79901CYBRD1CYB561A2 | DCYTB | FRRS3cytochrome b reductase 12q31.1CV:PGCnp
151126ZNF385BZNF533zinc finger protein 385B2q31.2-q31.3CV:PGCnp
DMG:Jaffe_2016
57703CWC22EIF4GL | NCM | fSAPbCWC22 homolog, spliceosome-associated protein2q31.3CV:PGCnpAscano FMRP targets
1386ATF2CRE-BP1 | CREB-2 | CREB2 | HB16 | TREB7activating transcription factor 22q32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
165215FAM171BKIAA1946family with sequence similarity 171 member B2q32.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
142679DUSP19DUSP17 | LMWDSP3 | SKRP1 | TS-DSP1dual specificity phosphatase 192q32.1CV:PGCnp
DMG:Nishioka_2013
6775STAT4SLEB11signal transducer and activator of transcription 42q32.2-q32.3CV:PGCnp
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
843CASP10ALPS2 | FLICE2 | MCH4caspase 102q33-q34CV:PGCnp
DMG:Wockner_2014
65065NBEAL1A530083I02Rik | ALS2CR16 | ALS2CR17neurobeachin like 12q33.2CV:PGCnp
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
1385CREB1CREB | CREB-1cAMP responsive element binding protein 12q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
4133MAP2MAP2A | MAP2B | MAP2Cmicrotubule associated protein 22q34-q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3577CXCR1C-C | C-C-CKR-1 | CD128 | CD181 | CDw128a | CKR-1 | CMKAR1 | IL8R1 | IL8RA | IL8RBAC-X-C motif chemokine receptor 12q35CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
55139ANKZF1ZNF744ankyrin repeat and zinc finger domain containing 12q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
79411GLB1L-galactosidase beta 1 like2q35CV:PGCnp
GSMA_IIA
GSMA_IIE
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
2043EPHA4HEK8 | SEK | TYRO1EPH receptor A42q36.1CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
130888FBXO36Fbx36F-box protein 362q36.3CV:PGCnp
DMG:Jaffe_2016
51665ASB1ASB-1ankyrin repeat and SOCS box containing 12q37CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
54658UGT1A1BILIQTL1 | GNT1 | HUG-BR1 | UDPGT | UDPGT 1-1 | UGT1 | UGT1AUDP glucuronosyltransferase family 1 member A12q37CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
250ALPPALP | PALP | PLAP | PLAP-1alkaline phosphatase, placental2q37CV:PGCnp
251ALPPL2ALPG | ALPPL | GCAPalkaline phosphatase, placental like 22q37CV:PGCnp
55230USP40-ubiquitin specific peptidase 402q37.1CV:PGCnp
DMG:Wockner_2014
5449POU1F1CPHD1 | GHF-1 | PIT1 | POU1F1a | Pit-1POU class 1 homeobox 13p11CV:PGCnp
GSMA_IIA
GSMA_IIE
23429RYBPAAP1 | APAP-1 | DEDAF | YEAF1RING1 and YY1 binding protein3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
200845KCTD6KCASH3potassium channel tetramerization domain containing 63p14.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
7318UBA7D8 | UBA1B | UBE1L | UBE2ubiquitin like modifier activating enzyme 73p21CV:PGCnp
1230CCR1CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1C-C motif chemokine receptor 13p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55802DCP1AHSA275986 | Nbla00360 | SMAD4IP1 | SMIFdecapping mRNA 1A3p21.1CV:PGCnp
DMG:Jaffe_2016
Network
56920SEMA3Gsem2semaphorin 3G3p21.1CV:PGCnp
LK:YES
6314ATXN7ADCAII | OPCA3 | SCA7ataxin 73p21.1-p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
54585LZTFL1BBS17leucine zipper transcription factor like 13p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
10181RBM5G15 | H37 | LUCA15 | RMB5RNA binding motif protein 53p21.3CV:PGCnpAscano FMRP targets
1951CELSR3ADGRC3 | CDHF11 | EGFL1 | FMI1 | HFMI1 | MEGF2 | RESDA1cadherin EGF LAG seven-pass G-type receptor 33p21.31CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
375341C3orf62-chromosome 3 open reading frame 623p21.31CV:PGCnp
DMG:Wockner_2014
91392ZNF502-zinc finger protein 5023p21.31CV:PGCnp
5364PLXNB1PLEXIN-B1 | PLXN5 | SEPplexin B13p21.31CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
115560ZNF501ZNF | ZNF52zinc finger protein 5013p21.31CV:PGCnp
64147KIF9-kinesin family member 93p21.31CV:PGCnp
DMG:Jaffe_2016
Expression
54681P4HTMEGLN4 | HIFPH4 | P4H-TM | PH-4 | PH4 | PHD4prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)3p21.31|3p21.3CV:PGCnp
DMG:Jaffe_2016
5210PFKFB4-6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 43p22-p21DEG:Zhao_2015
5333PLCD1NDNC3 | PLC-IIIphospholipase C delta 13p22-p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
9852EPM2AIP1-EPM2A (laforin) interacting protein 13p22.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
4336MOBP-myelin-associated oligodendrocyte basic protein3p22.1CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
344787ZNF860-zinc finger protein 8603p23CV:PGCnp
116135LRRC3BLRP15leucine rich repeat containing 3B3p24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8850KAT2BCAF | P/CAF | PCAFlysine acetyltransferase 2B3p24CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
27303RBMS3-RNA binding motif, single stranded interacting protein 33p24-p23CV:GWASdb
CV:PGCnp
GSMA_I
132014IL17RE-interleukin 17 receptor E3p25.3CV:GWASdb
CV:PGCnp
285220EPHA6EHK-2 | EHK2 | EK12 | EPA6 | HEK12 | PRO57066EPH receptor A63q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
PMID:cooccur
5627PROS1PROS | PS21 | PS22 | PS23 | PS24 | PS25 | PSA | THPH5 | THPH6protein S (alpha)3q11.2CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
57337SENP7-SUMO1/sentrin specific peptidase 73q12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
1295COL8A1C3orf7collagen type VIII alpha 13q12.3GSMA_IIA
GSMA_IIE
PMID:cooccur
29114TAGLN3NP22 | NP24 | NP25transgelin 33q13.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_IIA
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
151887CCDC80DRO1 | SSG1 | URB | okuribincoiled-coil domain containing 803q13.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
1475CSTAAREI | PSS4 | STF1 | STFAcystatin A3q21CV:PGCnp
DMG:vanEijk_2014
2960GTF2E1FE | TF2E1 | TFIIE-Ageneral transcription factor IIE subunit 13q21-q24CV:PGCnp
DEG:Zhao_2015
79663HSPBAP1PASS1HSPB1 associated protein 13q21.1CV:PGCnp
151636DTX3LBBAPdeltex 3 like, E3 ubiquitin ligase3q21.1CV:PGCnp
DMG:Wockner_2014
57493HEG1HEG | MST112 | MSTP112heart development protein with EGF like domains 13q21.2CV:PGCnp
8971H1FXH1.10 | H1XH1 histone family member X3q21.3CV:PGCnp
DMG:Nishioka_2013
53833IL20RBDIRS1 | FNDC6 | IL-20R2interleukin 20 receptor subunit beta3q22.3CV:PGCnp
CV:PheWAS
344838PAQR9-progestin and adipoQ receptor family member IX3q23CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
57088PLSCR4TRA1phospholipid scramblase 43q24CV:PGCnp
PMID:cooccur
4311MMECALLA | CD10 | NEP | SFEmembrane metallo-endopeptidase3q25.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
285315C3orf33AC3-33chromosome 3 open reading frame 333q25.31CV:PGCnp
DMG:Jaffe_2016
5918RARRES1LXNL | PERG-1 | TIG1retinoic acid receptor responder (tazarotene induced) 13q25.32CV:PGCnp
DMG:Wockner_2014
56925LXNECI | TCIlatexin3q25.32DMG:vanEijk_2014
8743TNFSF10APO2L | Apo-2L | CD253 | TL2 | TNLG6A | TRAILtumor necrosis factor superfamily member 103q26CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
5337PLD1-phospholipase D13q26CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
165679SPTSSBADMP | C3orf57 | SSSPTBserine palmitoyltransferase small subunit B3q26.1CV:PGCnp
5274SERPINI1PI12 | neuroserpinserpin peptidase inhibitor, clade I (neuroserpin), member 13q26.1CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
57709SLC7A14PPP1R142solute carrier family 7 member 143q26.2CV:GWAScat
CV:GWASdb
CV:PGCnp
254827NAALADL2-N-acetylated alpha-linked acidic dipeptidase-like 23q26.31CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
64778FNDC3BFAD104 | PRO4979 | YVTM2421fibronectin type III domain containing 3B3q26.31CV:PGCnp
Expression
79718TBL1XR1C21 | DC42 | IRA1 | TBLR1transducin (beta)-like 1 X-linked receptor 13q26.32CV:GWASdb
CV:PGCnp
23200ATP11BATPIF | ATPIRATPase phospholipid transporting 11B (putative)3q27CV:PGCnp
DMG:Jaffe_2016
604BCL6BCL5 | BCL6A | LAZ3 | ZBTB27 | ZNF51B-cell CLL/lymphoma 63q27CV:PGCnp
DMG:Jaffe_2016
10644IGF2BP2IMP-2 | IMP2 | VICKZ2insulin like growth factor 2 mRNA binding protein 23q27.2CV:PGCnp
PMID:cooccur
401105FLJ42393AVPC1948uncharacterized LOC4011053q27.3CV:PGCnp
6480ST6GAL1SIAT1 | ST6GalI | ST6NST6 beta-galactosamide alpha-2,6-sialyltranferase 13q27.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
84984CEP19C3orf34 | MOSPGFcentrosomal protein 19kDa3q29CNV:YES
CV:PGCnp
Expression
323APBB2FE65L | FE65L1amyloid beta precursor protein binding family B member 24p13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
54502RBM47NET18RNA binding motif protein 474p14CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
7096TLR1CD281 | TIL | TIL. LPRS5 | rsc786toll like receptor 14p14CV:PGCnp
PMID:cooccur
57728WDR19ATD5 | CED4 | DYF-2 | IFT144 | NPHP13 | ORF26 | Oseg6 | PWDMP | SRTD5WD repeat domain 194p14DMG:Jaffe_2016Ascano FMRP targets
54876DCAF16C4orf30DDB1 and CUL4 associated factor 164p15.31CV:PGCnp
Expression
64151NCAPGCAPG | CHCG | NY-MEL-3 | YCG1non-SMC condensin I complex subunit G4p15.33CV:PGCnpAscano FMRP targets
768239PSAPL1-prosaposin-like 1 (gene/pseudogene)4p16.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
57537SORCS2-sortilin related VPS10 domain containing receptor 24p16.1CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GO_Annotation
10608MXD4MAD4 | MST149 | MSTP149 | bHLHc12MAX dimerization protein 44p16.3CV:PGCnp
10336PCGF3DONG1 | RNF3 | RNF3Apolycomb group ring finger 34p16.3CV:PGCnp
DMG:Wockner_2014
2868GRK4GPRK2L | GPRK4 | GRK4a | IT11G protein-coupled receptor kinase 44p16.3CV:PGCnp
DMG:Nishioka_2013
353497POLNPOL4Ppolymerase (DNA) nu4p16.3CV:PGCnp
DMG:Wockner_2014
166793ZBTB49ZNF509zinc finger and BTB domain containing 494p16.3CV:PGCnp
DMG:Jaffe_2016
6002RGS12-regulator of G-protein signaling 124p16.3CV:PGCnp
DMG:Wockner_2014
DNM:Guipponi_2014
DNM:Xu_2012
Network
PMID:cooccur
CompositeSet
64854USP46-ubiquitin specific peptidase 464q12PMID:cooccur
9662CEP135CEP4 | KIAA0635 | MCPH8centrosomal protein 135kDa4q12CV:PGCnp
DMG:Jaffe_2016
27284SULT1B1ST1B1 | ST1B2 | SULT1B2sulfotransferase family 1B member 14q13.3CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
2921CXCL3CINC-2b | GRO3 | GROg | MIP-2b | MIP2B | SCYB3C-X-C motif chemokine ligand 34q21CV:PGCnp
DMG:Jaffe_2016
5470PPEF2PPP7CBprotein phosphatase with EF-hand domain 24q21.1CV:PGCnp
PMID:cooccur
8987STBD1GENEX3414 | GENX-3414starch binding domain 14q21.1CV:PGCnp
11275KLHL2ABP-KELCH | MAV | MAYVENkelch like family member 24q21.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
79966SCD5ACOD4 | FADS4 | HSCD5 | SCD2 | SCD4stearoyl-CoA desaturase 54q21.22CV:PGCnp
DEG:Zhao_2015
Expression
132989C4orf36-chromosome 4 open reading frame 364q21.3CV:PGCnp
5783PTPN13FAP-1 | PNP1 | PTP-BAS | PTP-BL | PTP1E | PTPL1 | PTPLE | hPTP1Eprotein tyrosine phosphatase, non-receptor type 134q21.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10855HPSEHPA | HPA1 | HPR1 | HPSE1 | HSE1heparanase4q21.3CV:PGCnp
DMG:Jaffe_2016
127ADH4ADH-2 | HEL-S-4alcohol dehydrogenase 4 (class II), pi polypeptide4q22PMID:cooccur
83478ARHGAP24FILGAP | RC-GAP72 | RCGAP72 | p73 | p73RhoGAPRho GTPase activating protein 244q22.1CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
5602MAPK10JNK3 | JNK3A | PRKM10 | SAPK1b | p493F12 | p54bSAPKmitogen-activated protein kinase 104q22.1-q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanNRC
Potential synaptic genes
54790TET2KIAA1546 | MDStet methylcytosine dioxygenase 24q24CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
80216ALPK18430410J10Rik | LAKalpha kinase 14q25CV:PGCnp
DMG:Wockner_2014
27071DAPP1BAM32dual adaptor of phosphotyrosine and 3-phosphoinositides4q25-q27CV:PGCnp
55212BBS7BBS2L1Bardet-Biedl syndrome 74q27CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
132332TMEM155-transmembrane protein 1554q27CV:PGCnp
84109QRFPRAQ27 | GPR103 | SP9155pyroglutamylated RFamide peptide receptor4q27CV:PGCnp
PMID:cooccur
79633FAT4CDHF14 | CDHR11 | FAT-J | FATJ | HKLLS2 | NBLA00548 | VMLDS2FAT atypical cadherin 44q28.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
201798TIGD4-tigger transposable element derived 44q31.3CV:GWASdb
CV:PGCnp
56034PDGFCFALLOTEIN | SCDGFplatelet derived growth factor C4q32CV:PGCnp
DMG:Jaffe_2016
1363CPECPHcarboxypeptidase E4q32.3CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
80817CEP44KIAA1712 | PS1TP3centrosomal protein 44kDa4q34CV:PGCnp
DMG:Jaffe_2016
Expression
Network
8819SAP30-Sin3A associated protein 30kDa4q34.1CV:PGCnp
DEG:Maycox_2009
7098TLR3CD283 | IIAE2toll like receptor 34q35CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
2195FAT1CDHF7 | CDHR8 | FAT | ME5 | hFat1FAT atypical cadherin 14q35CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
348980HCN1BCNG-1 | BCNG1 | EIEE24 | HAC-2hyperpolarization activated cyclic nucleotide gated potassium channel 15p12CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
6507SLC1A3EA6 | EAAT1 | GLAST | GLAST1solute carrier family 1 member 35p13CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
2533FYBADAP | PRO0823 | SLAP-130 | SLAP130FYN binding protein5p13.1CV:GWASdb
CV:PGCnp
GO_Annotation
9180OSMROSMRB | PLCA1oncostatin M receptor5p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
84674CARD6CINCIN1caspase recruitment domain family member 65p13.1CV:PGCnp
DNM:Xu_2012
CompositeSet
23548TTC33OSRFtetratricopeptide repeat domain 335p13.1CV:GWASdb
CV:PGCnp
2668GDNFATF1 | ATF2 | HFB1-GDNF | HSCR3glial cell derived neurotrophic factor5p13.1-p12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
50834TAS2R1T2R1 | TRB7taste 2 receptor member 15p15CV:PGCnp
79722ANKRD55-ankyrin repeat domain 555q11.2CV:PGCnp
PMID:cooccur
5144PDE4DACRDYS2 | DPDE3 | HSPDE4D | PDE43 | PDE4DN2 | STRK1phosphodiesterase 4D5q12CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
55789DEPDC1BBRCC3 | XTP1DEP domain containing 1B5q12.1CV:PGCnp
1161ERCC8CKN1 | CSA | UVSS2excision repair cross-complementation group 85q12.1CV:PGCnp
375449MAST4-microtubule associated serine/threonine kinase family member 45q12.3CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3350HTR1A5-HT-1A | 5-HT1A | 5HT1a | ADRB2RL1 | ADRBRL1 | G-21 | PFMCD5-hydroxytryptamine receptor 1A5q12.3ADT:Sun_2012
Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
SEROTONIN
5295PIK3R1AGM7 | GRB1 | IMD36 | p85 | p85-ALPHAphosphoinositide-3-kinase regulatory subunit 15q13.1CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
PMID:cooccur
115548FCHO2-FCH domain only 25q13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9765ZFYVE16PPP1R69zinc finger FYVE-type containing 165q14CV:PGCnp
DMG:Jaffe_2016
5066PAMPAL | PHMpeptidylglycine alpha-amidating monooxygenase5q14-q21CV:GWASdb
CV:PGCnp
Expression
GR_Ng
PMID:cooccur
57561ARRDC3TLIMParrestin domain containing 35q14.3CV:PGCnp
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
285600KIAA0825C5orf36KIAA08255q15CV:PGCnp
DMG:Jaffe_2016
2241FERPPP1R74 | TYK3 | p94-FerFER tyrosine kinase5q21CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
Network
PMID:cooccur
1946EFNA5AF1 | EFL5 | EPLG7 | GLC1M | LERK7 | RAGSephrin-A55q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
4163MCCMCC1mutated in colorectal cancers5q21CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
64097EPB41L4AEPB41L4 | NBL4erythrocyte membrane protein band 4.1 like 4A5q21.3CV:GWASdb
CV:PGCnp
1657DMXL1-Dmx like 15q22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
153733CCDC112MBC1coiled-coil domain containing 1125q22.3CV:PGCnp
995CDC25CCDC25 | PPP1R60cell division cycle 25C5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
56144PCDHA4CNR1 | CNRN1 | CRNR1 | PCDH-ALPHA4protocadherin alpha 45q31CV:PGCnp
GO_Annotation
GSMA_I
Network
CompositeSet
Darnell FMRP targets
492311IGIPC5orf53IgA-inducing protein5q31CV:PGCnp
GSMA_I
57113TRPC7TRP7transient receptor potential cation channel subfamily C member 75q31.1CV:GWASdb
CV:PGCnp
GSMA_I
26045LRRTM2-leucine rich repeat transmembrane neuronal 25q31.2CV:PGCnp
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
4888NPY6RNPY1RL | NPY6RP | PP2 | Y2Bneuropeptide Y receptor Y6 (pseudogene)5q31.2CV:PGCnp
51523CXXC5CF5 | HSPC195 | RINF | WIDCXXC finger protein 55q31.2CV:PGCnp
GSMA_I
9812KIAA0141DELEKIAA01415q31.3CV:PGCnp
GSMA_I
972CD74DHLAG | HLADG | II | Ia-GAMMACD74 molecule5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
11346SYNPO-synaptopodin5q33.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2196FAT2CDHF8 | CDHR9 | HFAT2 | MEGF1FAT atypical cadherin 25q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
8817FGF18FGF-18 | ZFGF5fibroblast growth factor 185q34Association
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
92181UBTD2DCUBPubiquitin domain containing 25q35.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
57179KIAA1191p33MONOX | p60MONOXKIAA11915q35.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
79930DOK3DOKLdocking protein 35q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
51149C5orf45-chromosome 5 open reading frame 455q35.3CV:PGCnp
DMG:Wockner_2014
51715RAB23HSPC137RAB23, member RAS oncogene family6p11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
55227LRRC1LANO | dJ523E19.1leucine rich repeat containing 16p12.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GSMA_IIE
57691KIAA1586-KIAA15866p12.1CV:PGCnp
81578COL21A1COLA1L | FP633collagen type XXI alpha 16p12.3-p11.2|6p12.3-p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
387032ZKSCAN4P1P373C6 | ZNF307 | ZNF427 | ZSCAN36zinc finger with KRAB and SCAN domains 46p21CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
9587MAD2L1BPCMT2MAD2L1 binding protein6p21.1CV:PGCnp
GSMA_IIE
Network
25844YIPF3C6orf109 | FinGER3 | KLIP1 | dJ337H4.3Yip1 domain family member 36p21.1CV:PGCnp
GSMA_IIE
55809TRERF1BCAR2 | HSA277276 | RAPA | TREP132 | TReP-132 | dJ139D8.5transcriptional regulating factor 16p21.1-p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
5467PPARDFAAR | NR1C2 | NUC1 | NUCI | NUCII | PPARBperoxisome proliferator activated receptor delta6p21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
PMID:cooccur
60685ZFAND3TEX27zinc finger AN1-type containing 36p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
7941PLA2G7LDL-PLA2 | LP-PLA2 | PAFAD | PAFAHphospholipase A2 group VII6p21.2-p12CV:PGCnp
GSMA_IIE
PMID:cooccur
629CFBAHUS4 | ARMD14 | BF | BFD | CFAB | CFBD | FB | FBI12 | GBG | H2-Bf | PBF2complement factor B6p21.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
3108HLA-DMAD6S222E | DMA | HLADM | RING6major histocompatibility complex, class II, DM alpha6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
3112HLA-DOBDOBmajor histocompatibility complex, class II, DO beta6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
6048RNF5RING5 | RMA1ring finger protein 5, E3 ubiquitin protein ligase6p21.3CV:PGCnp
Expression
GSMA_I
Network
PMID:cooccur
170954PPP1R18HKMT1098 | KIAA1949protein phosphatase 1 regulatory subunit 186p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10384BTN3A3BTF3 | BTN3.3butyrophilin subfamily 3 member A36p21.3CV:PGCnp
GSMA_I
PMID:cooccur
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
1041CDSNHTSS | HTSS1 | HYPT2 | PSS | PSS1 | Scorneodesmosin6p21.3CV:PGCnp
GSMA_I
1388ATF6BCREB-RP | CREBL1 | G13activating transcription factor 6 beta6p21.3Association
CV:PGCnp
780DDR1CAK | CD167 | DDR | EDDR1 | HGK2 | MCK10 | NEP | NTRK4 | PTK3 | PTK3A | RTK6 | TRKEdiscoidin domain receptor tyrosine kinase 16p21.3Association
CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
3305HSPA1LHSP70-1L | HSP70-HOM | HSP70T | hum70theat shock protein family A (Hsp70) member 1 like6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3008HIST1H1EH1.4 | H1E | H1F4 | H1s-4 | dJ221C16.5histone cluster 1, H1e6p21.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23564DDAH2DDAH | DDAHII | G6a | HEL-S-277 | NG30dimethylarginine dimethylaminohydrolase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
534ATP6V1G2ATP6G | ATP6G2 | NG38 | VMA10ATPase H+ transporting V1 subunit G26p21.3GO_Annotation
GSMA_I
ION BALANCE
CompositeSet
7923HSD17B8D6S2245E | FABG | FABGL | H2-KE6 | HKE6 | KE6 | RING2 | SDR30C1 | dJ1033B10.9hydroxysteroid (17-beta) dehydrogenase 86p21.3CV:PGCnp
GSMA_I
578BAK1BAK | BAK-LIKE | BCL2L7 | CDN1BCL2 antagonist/killer 16p21.3Association
CV:PGCnp
GSMA_I
3077HFEHFE1 | HH | HLA-H | MVCD7 | TFQTL2hemochromatosis6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
58496LY6G5BC6orf19 | G5blymphocyte antigen 6 complex, locus G5B6p21.3CV:PGCnp
GSMA_I
221504ZBTB9ZNF919zinc finger and BTB domain containing 96p21.32CV:PGCnp
DMG:Wockner_2014
GSMA_I
389376SFTA2GSGL541 | SFTPG | SP-G | UNQ541surfactant associated 26p21.33CV:PGCnp
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
253018HCG27bCX101P6.9 | bPG299F13.9 | bQB115I13.2HLA complex group 27 (non-protein coding)6p21.33CV:PGCnp
GSMA_I
55937APOMG3a | HSPC336 | NG20 | apo-Mapolipoprotein M6p21.33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
1871E2F3E2F-3E2F transcription factor 36p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
81797OR12D3hs6M1-27olfactory receptor family 12 subfamily D member 36p22.1CV:GWASdb
CV:PGCnp
GSMA_I
79692ZNF322HCG12 | ZNF322A | ZNF388 | ZNF489zinc finger protein 3226p22.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
692092SNORD32BU32Bsmall nucleolar RNA, C/D box 32B6p22.1CV:PGCnp
11118BTN3A2BT3.2 | BTF4 | BTN3.2 | CD277butyrophilin subfamily 3 member A26p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8354HIST1H3IH3.f | H3/f | H3FFhistone cluster 1, H3i6p22.1CV:PGCnp
GSMA_I
55604LRRC16ACARMIL | CARMIL1 | CARMIL1a | LRRC16 | dJ501N12.1 | dJ501N12.5leucine rich repeat containing 16A6p22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
26531OR11A16M1-18 | OR11A2 | dJ994E9.6 | hs6M1-18olfactory receptor family 11 subfamily A member 16p22.2-p21.31CV:PGCnp
GSMA_I
221662RBM24RNPC6 | dJ259A10.1RNA binding motif protein 246p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
255488RNF144BIBRDC2 | PIR2 | bA528A10.3 | p53RFPring finger protein 144B6p22.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
81697OR2B2OR2B2Q | OR2B9 | OR6-1 | dJ193B12.4 | hs6M1-10olfactory receptor family 2 subfamily B member 26p22.3-p21.3CV:PGCnp
GSMA_I
63971KIF13ARBKIN | bA500C11.2kinesin family member 13A6p23CV:PGCnp
GSMA_I
PMID:cooccur
7020TFAP2AAP-2 | AP-2alpha | AP2TF | BOFS | TFAP2transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)6p24CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
3096HIVEP1CIRIP | CRYBP1 | GAAP | MBP-1 | PRDII-BF1 | Schnurri-1 | ZAS1 | ZNF40 | ZNF40Ahuman immunodeficiency virus type I enhancer binding protein 16p24-p22.3CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_I
CompositeSet
Darnell FMRP targets
7280TUBB2ACDCBM5 | TUBB | TUBB2tubulin beta 2A class IIa6p25CV:PGCnp
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
6239RREB1FINB | HNT | LZ321 | RREB-1 | Zep-1ras responsive element binding protein 16p25CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
9425CDYLCDYL1chromodomain protein, Y-like6p25.1CV:PGCnp
GSMA_I
51299NRN1NRN | dJ380B8.2neuritin 16p25.1CV:PGCnp
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
8737RIPK1RIP | RIP-1 | RIP1receptor interacting serine/threonine kinase 16p25.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9324HMGN3PNAS-24 | PNAS-25 | TRIP7high mobility group nucleosomal binding domain 36q14.1CV:PGCnp
DMG:Wockner_2014
1081CGACG-ALPHA | FSHA | GPHA1 | GPHa | HCG | LHA | TSHAglycoprotein hormones, alpha polypeptide6q14.3CV:PGCnp
PMID:cooccur
10957PNRC1B4-2 | PNAS-145 | PROL2 | PRR2proline rich nuclear receptor coactivator 16q15CV:GWASdb
CV:PGCnp
84154RPF2BXDC1 | bA397G5.4ribosome production factor 2 homolog6q21CV:PGCnpAscano FMRP targets
256380SCML4dJ47M23.1sex comb on midleg-like 4 (Drosophila)6q21CV:GWASdb
CV:PGCnp
11149BVESHBVES | LGMD2X | POP1 | POPDC1blood vessel epicardial substance6q21CV:PGCnp
DMG:Wockner_2014
2444FRKGTK | PTK5 | RAKfyn related Src family tyrosine kinase6q21-q22.3CV:PGCnp
DMG:Wockner_2014
7164TPD52L1D53tumor protein D52-like 16q22-q23CV:PGCnp
DMG:Wockner_2014
5796PTPRKR-PTP-kappaprotein tyrosine phosphatase, receptor type K6q22.2-q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
79632FAM184AC6orf60family with sequence similarity 184 member A6q22.31CV:PGCnp
8417STX7-syntaxin 76q23.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
64577ALDH8A1ALDH12 | DJ352A20.2aldehyde dehydrogenase 8 family member A16q23.2CV:PGCnp
9287TAAR2GPR58 | taR-2trace amine associated receptor 26q24CV:GWASdb
PMID:cooccur
54516MTRF1LHMRF1L | MRF1L | mtRF1amitochondrial translational release factor 1 like6q25-q26CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
10090UST2OSTuronyl 2-sulfotransferase6q25.1CV:GWASdb
CV:PGCnp
6648SOD2IPOB | MNSOD | MVCD6superoxide dismutase 2, mitochondrial6q25.3Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
117289TAGAPARHGAP47 | FKSG15 | IDDM21 | TAGAP1T-cell activation RhoGTPase activating protein6q25.3CV:PGCnp
DMG:Wockner_2014
5340PLG-plasminogen6q26CV:PGCnp
GO_Annotation
Network
PMID:cooccur
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
10320IKZF1Hs.54452 | IK1 | IKAROS | LYF1 | LyF-1 | PPP1R92 | PRO0758 | ZNFN1A1IKAROS family zinc finger 17p12.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GO_Annotation
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
8621CDK13CDC2L | CDC2L5 | CHED | hCDK13cyclin-dependent kinase 137p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
23386NUDCD3NudCLNudC domain containing 37p13-p12CV:PGCnpAscano FMRP targets
23080AVL9KIAA0241AVL9 cell migration associated7p14.3CV:PGCnp
DMG:Jaffe_2016
168667BMPERCRIM3 | CV-2 | CV2BMP binding endothelial regulator7p14.3CV:PGCnp
DMG:Jaffe_2016
8887TAX1BP1CALCOCO3 | T6BP | TXBP151Tax1 (human T-cell leukemia virus type I) binding protein 17p15CV:PGCnp
DMG:Jaffe_2016
9586CREB5CRE-BPA | CREB-5cAMP responsive element binding protein 57p15.1CV:PGCnp
DEG:Zhao_2015
9734HDAC9HD7 | HD7b | HD9 | HDAC | HDAC7 | HDAC7B | HDAC9B | HDAC9FL | HDRP | MITRhistone deacetylase 97p21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
113263GLCCI1FAM117C | GCTR | GIG18 | TSSN1glucocorticoid induced 17p21.3CV:PGCnp
DMG:Wockner_2014
5154PDGFAPDGF-A | PDGF1platelet derived growth factor subunit A7p22DMG:Jaffe_2016
Expression
7559ZNF12GIOT-3 | HZF11 | KOX3 | ZNF325zinc finger protein 127p22.1CV:PGCnp
Expression
3955LFNGSCDO3LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase7p22.2CV:PGCnp
DMG:Wockner_2014
1365CLDN3C7orf1 | CPE-R2 | CPETR2 | HRVP1 | RVP1claudin 37q11.23CNV:YES
CV:PGCnp
GO_Annotation
57639CCDC146-coiled-coil domain containing 1467q11.23CV:PGCnp
9569GTF2IRD1BEN | CREAM1 | GTF3 | MUSTRD1 | RBAP2 | WBS | WBSCR11 | WBSCR12 | hMusTRD1alpha1GTF2I repeat domain containing 17q11.23CNV:YES
CV:PGCnp
DMG:Wockner_2014
DNM:Ambalavanan_2016
PMID:cooccur
Ascano FMRP targets
9275BCL7B-B-cell CLL/lymphoma 7B7q11.23CNV:YES
2770GNAI1GiG protein subunit alpha i17q21CV:PGCnp
Network
PMID:cooccur
CANABINOID
G-PROTEIN RELAY
SEROTONIN
Potential synaptic genes
1021CDK6MCPH12 | PLSTIREcyclin-dependent kinase 67q21-q22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
10142AKAP9AKAP-9 | AKAP350 | AKAP450 | CG-NAP | HYPERION | LQT11 | MU-RMS-40.16A | PPP1R45 | PRKA9 | YOTIAOA-kinase anchoring protein 97q21-q22CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1577CYP3A5CP35 | CYPIIIA5 | P450PCN3 | PCN3cytochrome P450 family 3 subfamily A member 57q21.1ADT:Sun_2012
CV:PGCnp
PMID:cooccur
11257TP53TG1LINC00096 | NCRNA00096 | P53TG1 | P53TG1-D | TP53AP1TP53 target 1 (non-protein coding)7q21.1CV:PGCnp
9723SEMA3EM-SEMAH | M-SemaK | SEMAH | coll-5semaphorin 3E7q21.11CV:GWASdb
CV:PGCnp
GO_Annotation
5166PDK4-pyruvate dehydrogenase kinase 47q21.3CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
Expression
64598MOSPD3CDS3 | NET30motile sperm domain containing 37q22DMG:Wockner_2014
64599GIGYF1GYF1 | PERQ1GRB10 interacting GYF protein 17q22CV:PGCnp
10156RASA4CAPRI | GAPLRAS p21 protein activator 47q22Expression
10135NAMPT1110035O14Rik | PBEF | PBEF1 | VF | VISFATINnicotinamide phosphoribosyltransferase7q22.3CV:GWASdb
CV:PGCnp
26959HBP1-HMG-box transcription factor 17q22.3CV:PGCnp
PMID:cooccur
2861GPR37EDNRBL | PAELR | hET(B)R-LPG protein-coupled receptor 377q31CV:PGCnp
DMG:Jaffe_2016
154743C7orf60-chromosome 7 open reading frame 607q31.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
50831TAS2R3T2R3taste 2 receptor member 37q31.3-q32DNM:Fromer_2014CompositeSet
100128553CTAGE4cTAGE-4CTAGE family member 47q35CV:PGCnp
26047CNTNAP2AUTS15 | CASPR2 | CDFE | NRXN4 | PTHSL1contactin associated protein-like 27q35CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
6604SMARCD3BAF60C | CRACD3 | Rsc6pSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 37q35-q36CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
Chromatin Remodeling Genes
59339PLEKHA2TAPP2pleckstrin homology domain containing A28p11.22CV:PGCnp
DMG:Jaffe_2016
11030RBPMSHERMESRNA binding protein with multiple splicing8p12CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
5327PLATT-PA | TPAplasminogen activator, tissue type8p12CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
Potential synaptic genes
23303KIF13BGAKINkinesin family member 13B8p12CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Ascano FMRP targets
665BNIP3LBNIP3a | NIXBCL2/adenovirus E1B 19kDa interacting protein 3-like8p21CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
8797TNFRSF10AAPO2 | CD261 | DR4 | TRAILR-1 | TRAILR1tumor necrosis factor receptor superfamily member 10a8p21CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
55756INTS9CPSF2L | INT9 | RC74integrator complex subunit 98p21.1CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
649BMP1OI13 | PCOLC | PCP | PCP2 | TLDbone morphogenetic protein 18p21.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
23362PSD3EFA6D | EFA6R | HCA67pleckstrin and Sec7 domain containing 38p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
80346REEP4C8orf20 | PP432 | Yip2creceptor accessory protein 48p21.3DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
5533PPP3CCCALNA3 | CNA3 | PP2Bgammaprotein phosphatase 3 catalytic subunit gamma8p21.3Association
Core
CV:PGCnp
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
57509MTUS1ATBP | ATIP | ICIS | MP44 | MTSG1microtubule associated tumor suppressor 18p22CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
5108PCM1PTC4 | RET/PCM-1pericentriolar material 18p22-p21.3Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
66036MTMR9C8orf9 | LIP-STYX | MTMR8myotubularin related protein 98p23-p22CV:GWAScat
CV:PGCnp
4482MSRAPMSRmethionine sulfoxide reductase A8p23.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
613209DEFB135DEFB136defensin beta 1358p23.1CV:PGCnp
9258MFHAS1LRRC65 | MASL1malignant fibrous histiocytoma amplified sequence 18p23.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
83595SOX7-SRY-box 78p23.1CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
9172MYOM2TTNAPmyomesin 28p23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
9821RB1CC1ATG17 | CC1 | FIP200 | PPP1R131RB1 inducible coiled-coil 18q11CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
115294PCMTD1-protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 18q11.23CV:PGCnp
8989TRPA1ANKTM1 | FEPStransient receptor potential cation channel subfamily A member 18q13CV:GWASdb
CV:PGCnp
137872ADHFE1ADH8 | HMFT2263 | HOTalcohol dehydrogenase, iron containing 18q13.1CV:PGCnp
64089SNX16-sorting nexin 168q21.13CV:GWASdb
CV:PGCnp
377677CA13CAXIIIcarbonic anhydrase XIII8q21.2CV:PGCnp
DMG:Jaffe_2016
64168NECAB1EFCBP1 | STIP-1N-terminal EF-hand calcium binding protein 18q21.3CV:PGCnp
DMG:Jaffe_2016
157657C8orf37CORD16 | RP64 | smalltalkchromosome 8 open reading frame 378q22.1CV:PGCnp
DMG:Wockner_2014
29967LRP12ST7LDL receptor related protein 128q22.2CV:PGCnp
Network
PMID:cooccur
51123ZNF706HSPC038 | PNAS-106 | PNAS-113zinc finger protein 7068q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9699RIMS2OBOE | RAB3IP3 | RIM2regulating synaptic membrane exocytosis 28q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
284ANGPT1AGP1 | AGPT | ANG1angiopoietin 18q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
4982TNFRSF11BOCIF | OPG | PDB5 | TR1tumor necrosis factor receptor superfamily member 11b8q24CV:PGCnp
CV:PheWAS
114907FBXO32Fbx32 | MAFbxF-box protein 328q24.13CV:PGCnp
DEG:Sanders_2013
DMG:vanEijk_2014
Expression
407033MIR30DMIRN30D | mir-30dmicroRNA 30d8q24.22CV:PGCnp
58500ZNF250ZFP647 | ZNF647zinc finger protein 2508q24.3CV:PGCnp
50626CYHR1CHRPcysteine/histidine-rich 18q24.3CV:PGCnp
DMG:Wockner_2014
1936EEF1DEF-1D | EF1D | FP1047eukaryotic translation elongation factor 1 delta8q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
573BAG1BAG-1 | HAP | RAP46BCL2 associated athanogene 19p12CV:PGCnp
Expression
PMID:cooccur
2683B4GALT1B4GAL-T1 | CDG2D | GGTB2 | GT1 | GTB | beta4Gal-T1UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 19p13CV:PGCnp
79937CNTNAP3CASPR3 | CNTNAP3Acontactin associated protein-like 39p13.1CV:PGCnp
GO_Annotation
PMID:cooccur
8434RECKST15reversion inducing cysteine rich protein with kazal motifs9p13.3CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
138724C9orf131-chromosome 9 open reading frame 1319p13.3CV:PGCnp
1029CDKN2AARF | CDK4I | CDKN2 | CMM2 | INK4 | INK4A | MLM | MTS-1 | MTS1 | P14 | P14ARF | P16 | P16-INK4A | P16INK4 | P16INK4A | P19 | P19ARF | TP16cyclin-dependent kinase inhibitor 2A9p21CV:PGCnp
DMG:Nishioka_2013
Network
203228C9orf72ALSFTD | FTDALS | FTDALS1chromosome 9 open reading frame 729p21.2CV:PGCnp
Expression
PMID:cooccur
554202MIR31HG-MIR31 host gene9p21.3CV:PGCnp
4300MLLT3AF9 | YEATS3myeloid/lymphoid or mixed-lineage leukemia; translocated to, 39p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
158219TTC39BC9orf52tetratricopeptide repeat domain 39B9p22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
11168PSIP1DFS70 | LEDGF | PAIP | PSIP2 | p52 | p75PC4 and SFRS1 interacting protein 19p22.3CV:PGCnp
81704DOCK8HEL-205 | MRD2 | ZIR8dedicator of cytokinesis 89p24.3CV:PGCnp
116224FAM122AC9orf42family with sequence similarity 122A9q21.11CV:PGCnp
5125PCSK5PC5 | PC6 | PC6A | SPC6proprotein convertase subtilisin/kexin type 59q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
1612DAPK1DAPKdeath-associated protein kinase 19q21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DNM:McCarthy_2014
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
83856FSD1LCCDC10 | CSDUFD1 | FSD1CL | FSD1NL | MIR1fibronectin type III and SPRY domain containing 1-like9q31CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
158401C9orf84-chromosome 9 open reading frame 849q31.3CV:PGCnp
1955MEGF9EGFL5multiple EGF like domains 99q32-q33.3CV:PGCnp
DMG:Jaffe_2016
2934GSNADF | AGELgelsolin9q33CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
727C5C5D | C5a | C5b | CPAMD4 | ECLZBcomplement component 59q33-q34CV:PGCnp
GO_Annotation
PMID:cooccur
153090DAB2IPAF9Q34 | AIP-1 | AIP1 | DIP1/2DAB2 interacting protein9q33.1-q33.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
11064CNTRLCEP1 | CEP110 | FAN | bA165P4.1centriolin9q33.2CV:PGCnp
10383TUBB4BBeta2 | TUBB2 | TUBB2Ctubulin beta 4B class IVb9q34CV:PGCnpSTRUCTURAL PLASTICITY
6136RPL12L12ribosomal protein L129q34CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
774CACNA1BBIII | CACNL1A5 | CACNN | Cav2.2 | DYT23calcium voltage-gated channel subunit alpha1 B9q34CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
2040STOMBND7 | EPB7 | EPB72stomatin9q34.1CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
57171DOLPP1LSFR2dolichyldiphosphatase 19q34.1CV:PGCnp
DMG:Jaffe_2016
10585POMT1LGMD2K | MDDGA1 | MDDGB1 | MDDGC1 | RTprotein O-mannosyltransferase 19q34.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
10444ZER1C9orf60 | ZYG | ZYG11BLzyg-11 related, cell cycle regulator9q34.11CV:PGCnpCompositeSet
Darnell FMRP targets
29941PKN3UTDP4-1protein kinase N39q34.11CV:PGCnp
DMG:Wockner_2014
9442MED27CRAP34 | CRSP34 | CRSP8 | MED3 | TRAP37mediator complex subunit 279q34.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
9329GTF3C4KAT12 | TF3C-delta | TFIII90 | TFIIIC290 | TFIIIC90 | TFIIICDELTAgeneral transcription factor IIIC subunit 49q34.13CV:GWASdb
CV:PGCnp
4851NOTCH1AOS5 | AOVD1 | TAN1 | hN1notch 19q34.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
5900RALGDSRGDS | RGF | RalGEFral guanine nucleotide dissociation stimulator9q34.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Guipponi_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
10013HDAC6CPBHM | HD6 | JM21 | PPP1R90histone deacetylase 6Xp11.23CV:PGCnp
DMG:vanEijk_2014
Chromatin Remodeling Genes
Potential synaptic genes
50943FOXP3AIID | DIETER | IPEX | JM2 | PIDX | XPIDforkhead box P3Xp11.23CV:PGCnp
PMID:cooccur
4128MAOAMAO-Amonoamine oxidase AXp11.3Association
CV:PGCnp
GO_Annotation
GR_Ng
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
6102RP2DELXp11.3 | NM23-H10 | NME10 | TBCCD2 | XRP2retinitis pigmentosa 2 (X-linked recessive)Xp11.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
80258EFHC2MRX74 | dJ1158H2.1EF-hand domain (C-terminal) containing 2Xp11.3CV:PGCnp
DMG:vanEijk_2014
7102TSPAN7A15 | CCG-B7 | CD231 | DXS1692E | MRX58 | MXS1 | TALLA-1 | TM4SF2 | TM4SF2btetraspanin 7Xp11.4CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8552INE1NCRNA00010inactivation escape 1 (non-protein coding)Xp11.4-p11.3PMID:cooccur
170302ARXCT121 | EIEE1 | ISSX | MRX29 | MRX32 | MRX33 | MRX36 | MRX38 | MRX43 | MRX54 | MRX76 | MRX87 | MRXS1 | PRTSaristaless related homeoboxXp21.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
6792CDKL5CFAP247 | EIEE2 | ISSX | STK9cyclin dependent kinase like 5Xp22CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5277PIGAGPI3 | MCAHS2 | PIG-A | PNH1phosphatidylinositol glycan anchor biosynthesis class AXp22.1DMG:vanEijk_2014
139411PTCHD1AUTSX4patched domain containing 1Xp22.11CV:PGCnp
PMID:cooccur
Potential synaptic genes
4810NHSCTRCT40 | CXN | SCML1NHS actin remodeling regulatorXp22.13CV:PGCnp
DNM:McCarthy_2014
PMID:cooccur
Ascano FMRP targets
54960GEMIN8FAM51A1gem nuclear organelle associated protein 8Xp22.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
2925GRPRBB2gastrin releasing peptide receptorXp22.2CV:PGCnp
PMID:cooccur
Potential synaptic genes
25878MXRA5-matrix-remodelling associated 5Xp22.33CV:GWASdb
CV:PGCnp
6473SHOXGCFX | PHOG | SHOXY | SSshort stature homeoboxXp22.33;Yp11.3PMID:cooccur
367ARAIS | AR8 | DHTR | HUMARA | HYSP1 | KD | NR3C4 | SBMA | SMAX1 | TFMandrogen receptorXq12Association
CV:PGCnp
GO_Annotation
GR_Ng
Network
PMID:cooccur
4674NAP1L2BPXnucleosome assembly protein 1 like 2Xq13DNM:Fromer_2014CompositeSet
538ATP7ADSMAX | MK | MNK | SMAX3ATPase copper transporting alphaXq21.1CV:PGCnp
GO_Annotation
PMID:cooccur
90293KLHL13BKLHD2kelch like family member 13Xq23-q24CV:GWASdb
CV:PGCnp
2747GLUD2GDH2 | GLUDP1glutamate dehydrogenase 2Xq24-q25CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
5365PLXNB3PLEXB3 | PLEXR | PLXN6plexin B3Xq28CV:PGCnp
PMID:cooccur
Potential synaptic genes