Gene Page: FEM1A
Summary ?
GeneID | 55527 |
Symbol | FEM1A |
Synonyms | EPRAP |
Description | fem-1 homolog a (C. elegans) |
Reference | MIM:613538|HGNC:HGNC:16934|HPRD:16888| |
Gene type | protein-coding |
Map location | 19p13.3 |
Pascal p-value | 0.329 |
Fetal beta | -0.516 |
DMG | 1 (# studies) |
eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Frontal Cortex BA9 Nucleus accumbens basal ganglia Putamen basal ganglia Meta |
Gene in Data Sources
Gene set name | Method of gene set | Description | Info |
---|---|---|---|
CV:PGCnp | Genome-wide Association Study | GWAS | |
DMG:Nishioka_2013 | Genome-wide DNA methylation analysis | The authors investigated the methylation profiles of DNA in peripheral blood cells from 18 patients with first-episode schizophrenia (FESZ) and from 15 normal controls. | 1 |
Section I. Genetics and epigenetics annotation
Differentially methylated gene
Probe | Chromosome | Position | Nearest gene | P (dis) | Beta (dis) | FDR (dis) | Study |
---|---|---|---|---|---|---|---|
cg26336164 | 19 | 4791680 | FEM1A | -0.022 | 0.65 | DMG:Nishioka_2013 |
eQTL annotation
Section II. Transcriptome annotation
General gene expression (GTEx)

Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
Top 10 positively co-expressed genes | ||
Gene | Pearson's Correlation | Spearman's Correlation |
ARVCF | 0.91 | 0.88 |
PRR14 | 0.91 | 0.88 |
MED25 | 0.91 | 0.88 |
ZNF446 | 0.90 | 0.90 |
RALGDS | 0.90 | 0.88 |
TELO2 | 0.89 | 0.87 |
GRAMD1A | 0.89 | 0.84 |
WIZ | 0.89 | 0.87 |
TOR2A | 0.89 | 0.85 |
KIAA1602 | 0.89 | 0.89 |
Top 10 negatively co-expressed genes | ||
Gene | Pearson's Correlation | Spearman's Correlation |
C5orf53 | -0.70 | -0.70 |
ACOT13 | -0.66 | -0.68 |
AF347015.27 | -0.66 | -0.73 |
S100B | -0.64 | -0.69 |
AF347015.31 | -0.64 | -0.72 |
MT-CO2 | -0.62 | -0.72 |
AF347015.21 | -0.61 | -0.79 |
AF347015.33 | -0.60 | -0.68 |
EAF2 | -0.60 | -0.66 |
AF347015.8 | -0.60 | -0.71 |
Section V. Pathway annotation
Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
---|---|---|---|
BIDUS METASTASIS UP | 214 | 134 | All SZGR 2.0 genes in this pathway |
BENPORATH NANOG TARGETS | 988 | 594 | All SZGR 2.0 genes in this pathway |
BENPORATH SOX2 TARGETS | 734 | 436 | All SZGR 2.0 genes in this pathway |
BYSTRYKH HEMATOPOIESIS STEM CELL QTL TRANS | 882 | 572 | All SZGR 2.0 genes in this pathway |
VIETOR IFRD1 TARGETS | 23 | 13 | All SZGR 2.0 genes in this pathway |
CHENG IMPRINTED BY ESTRADIOL | 110 | 68 | All SZGR 2.0 genes in this pathway |
ACEVEDO NORMAL TISSUE ADJACENT TO LIVER TUMOR DN | 354 | 216 | All SZGR 2.0 genes in this pathway |
BOCHKIS FOXA2 TARGETS | 425 | 261 | All SZGR 2.0 genes in this pathway |
ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY | 1839 | 928 | All SZGR 2.0 genes in this pathway |