Summary ?
GeneID7704
SymbolZBTB16
SynonymsPLZF|ZNF145
Descriptionzinc finger and BTB domain containing 16
ReferenceMIM:176797|HGNC:HGNC:12930|Ensembl:ENSG00000109906|HPRD:11762|Vega:OTTHUMG00000168243
Gene typeprotein-coding
Map location11q23.1
Pascal p-value0.733
Sherlock p-value0.64
Fetal beta-2.017
DMG1 (# studies)

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:GWASdbGenome-wide Association StudiesGWASdb records for schizophrenia
CV:PGCnpGenome-wide Association StudyGWAS
DMG:Jaffe_2016Genome-wide DNA methylation analysisThis dataset includes 2,104 probes/CpGs associated with SZ patients (n=108) compared to 136 controls at Bonferroni-adjusted P < 0.05. 1
GSMA_IGenome scan meta-analysisPsr: 0.006 
ExpressionMeta-analysis of gene expressionP value: 2.137 
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 

Section I. Genetics and epigenetics annotation

@Differentially methylated gene

ProbeChromosomePositionNearest geneP (dis)Beta (dis)FDR (dis)Study
cg0767313311113930011ZBTB161.22E-8-0.0154.99E-6DMG:Jaffe_2016


Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
GenePearson's Correlation Spearman's Correlation
DDX50.960.94
ZNF285B0.950.91
UIMC10.950.88
C1orf260.950.93
CEP570.950.93
HSF20.940.93
ZCCHC70.940.94
ZNF5860.940.88
WTAP0.940.94
TEX100.940.91
Top 10 negatively co-expressed genes
GenePearson's Correlation Spearman's Correlation
HLA-F-0.71-0.80
AIFM3-0.70-0.79
AF347015.31-0.69-0.87
AF347015.27-0.69-0.86
MT-CO2-0.68-0.87
FBXO2-0.68-0.70
PTH1R-0.68-0.74
C5orf53-0.67-0.72
IFI27-0.67-0.86
MT-CYB-0.67-0.86

Section III. Gene Ontology annotation

Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003677DNA bindingNAS9294197 
GO:0008270zinc ion bindingIEA-
GO:0016566specific transcriptional repressor activityIDA12802276 
GO:0042803protein homodimerization activityIDA8622986 
GO:0046872metal ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007417central nervous system developmentISSBrain (GO term level: 6)8541544 
GO:0001823mesonephros developmentISS8541544 
GO:0006350transcriptionIEA-
GO:0006511ubiquitin-dependent protein catabolic processIEA-
GO:0006915apoptosisNAS9294197 
GO:0045638negative regulation of myeloid cell differentiationISS8541544 
GO:0045892negative regulation of transcription, DNA-dependentIDA12802276 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005622intracellularIEA-
GO:0005634nucleusIDA9294197 
GO:0005730nucleolusIDA18029348 
GO:0016607nuclear speckIDA8541544 
GO:0016605PML bodyIDA9294197 
GO:0017053transcriptional repressor complexIDA12802276 

Section IV. Protein-protein interaction annotation

InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
AGTR1AG2S | AGTR1A | AGTR1B | AT1 | AT1B | AT1R | AT2R1 | AT2R1A | AT2R1B | HAT1Rangiotensin II receptor, type 1Reconstituted Complex
Two-hybrid
BioGRID14657020 
AGTR2AT2 | ATGR2 | MRX88angiotensin II receptor, type 2-HPRD14657020 
ANAPC5APC5anaphase promoting complex subunit 5Two-hybridBioGRID16169070 
BCL6BCL5 | BCL6A | LAZ3 | ZBTB27 | ZNF51B-cell CLL/lymphoma 6-HPRD,BioGRID11175338 
BMI1MGC12685 | PCGF4 | RNF51BMI1 polycomb ring finger oncogene-HPRD,BioGRID12408802 
CCDC109BFLJ20647coiled-coil domain containing 109BTwo-hybridBioGRID16169070 
CCDC130MGC10471coiled-coil domain containing 130Two-hybridBioGRID16169070 
CCDC85BDIPAcoiled-coil domain containing 85BTwo-hybridBioGRID16189514 
CD81S5.7 | TAPA1 | TSPAN28CD81 moleculeTwo-hybridBioGRID16169070 
CDC2CDC28A | CDK1 | DKFZp686L20222 | MGC111195cell division cycle 2, G1 to S and G2 to M-HPRD,BioGRID10497277 
CEP70BITE | FLJ13036centrosomal protein 70kDaTwo-hybridBioGRID16189514 
CEP72FLJ10565 | KIAA1519 | MGC5307centrosomal protein 72kDaTwo-hybridBioGRID16189514 
CIDEACIDE-Acell death-inducing DFFA-like effector aTwo-hybridBioGRID16169070 
COQ6CGI-10coenzyme Q6 homolog, monooxygenase (S. cerevisiae)Two-hybridBioGRID16169070 
DLSTDLTSdihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)Two-hybridBioGRID16169070 
DPM1CDGIE | MPDSdolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunitTwo-hybridBioGRID16169070 
EIF2S2DKFZp686L18198 | EIF2 | EIF2B | EIF2beta | MGC8508eukaryotic translation initiation factor 2, subunit 2 beta, 38kDaTwo-hybridBioGRID16169070 
ENOX1CNOX | FLJ10094 | PIG38 | bA64J21.1 | cCNOXecto-NOX disulfide-thiol exchanger 1Two-hybridBioGRID16189514 
EPN1-epsin 1-HPRD10791968 
ESR1DKFZp686N23123 | ER | ESR | ESRA | Era | NR3A1estrogen receptor 1-HPRD,BioGRID14521715 
FAM101BMGC45871family with sequence similarity 101, member BTwo-hybridBioGRID16169070 
FCHO1KIAA0290FCH domain only 1Two-hybridBioGRID16169070 
FHL2AAG11 | DRAL | SLIM3four and a half LIM domains 2-HPRD,BioGRID12145280 
GATA1ERYF1 | GF-1 | GF1 | NFE1GATA binding protein 1 (globin transcription factor 1)-HPRD,BioGRID12242665 
GATA2MGC2306 | NFE1BGATA binding protein 2-HPRD,BioGRID11964310 
GCSHGCE | NKHglycine cleavage system protein H (aminomethyl carrier)Two-hybridBioGRID16169070 
GSTM4GSTM4-4 | GTM4 | MGC131945 | MGC9247glutathione S-transferase mu 4Two-hybridBioGRID16169070 
HBEGFDTR | DTS | DTSF | HEGFLheparin-binding EGF-like growth factor-HPRD,BioGRID14597771 |15219838 
HBXIPMGC71071 | XIPhepatitis B virus x interacting proteinTwo-hybridBioGRID16169070 
HDAC1DKFZp686H12203 | GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 1-HPRD9627120 |15467736 
HDAC1DKFZp686H12203 | GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 1Affinity Capture-Western
Reconstituted Complex
BioGRID9627120 |9765306 
|15467736 
HDAC1DKFZp686H12203 | GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 1HDAC1 interacts with PLZF. This interaction was modelled on a demonstrated interaction between HDAC1 and PLZF from unspecified species.BIND9486654 
HDAC2RPD3 | YAF1histone deacetylase 2Reconstituted ComplexBioGRID15467736 
HDAC3HD3 | RPD3 | RPD3-2histone deacetylase 3Reconstituted ComplexBioGRID15467736 
HDAC4HA6116 | HD4 | HDAC-A | HDACA | KIAA0288histone deacetylase 4-HPRD,BioGRID11929873 |15467736 
HDAC5FLJ90614 | HD5 | NY-CO-9histone deacetylase 5-HPRD,BioGRID11929873 |15467736 
HDAC6FLJ16239 | HD6 | JM21histone deacetylase 6-HPRD,BioGRID15467736 
HDAC7DKFZp586J0917 | FLJ99588 | HD7A | HDAC7Ahistone deacetylase 7Reconstituted ComplexBioGRID11929873 
HDAC9DKFZp779K1053 | HD7 | HDAC | HDAC7 | HDAC7B | HDAC9B | HDAC9FL | HDRP | KIAA0744 | MITRhistone deacetylase 9-HPRD12590135 
HEATR2FLJ20397 | FLJ25564 | FLJ31671 | FLJ39381HEAT repeat containing 2Two-hybridBioGRID16169070 
KRTAP4-12KAP4.12 | KRTAP4.12keratin associated protein 4-12Two-hybridBioGRID16189514 
LDOC1BCUR1 | Mar7 | Mart7leucine zipper, down-regulated in cancer 1Two-hybridBioGRID16189514 
LMTK3KIAA1883 | LMR3 | TYKLM3lemur tyrosine kinase 3Two-hybridBioGRID16169070 
LSM2C6orf28 | G7b | YBL026W | snRNPLSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)Two-hybridBioGRID16169070 
LYARFLJ20425 | ZLYARLy1 antibody reactive homolog (mouse)Two-hybridBioGRID16169070 
MAGEA11MAGE-11 | MAGE11 | MAGEA-11 | MGC10511melanoma antigen family A, 11Two-hybridBioGRID16189514 
MAP3K3MAPKKK3 | MEKK3mitogen-activated protein kinase kinase kinase 3Two-hybridBioGRID16169070 
NCOR1KIAA1047 | MGC104216 | N-CoR | TRAC1 | hCIT529I10 | hN-CoRnuclear receptor co-repressor 1-HPRD,BioGRID9531570 
NCOR2CTG26 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC-1 | TRAC1nuclear receptor co-repressor 2-HPRD9256429 |14982881 
NCOR2CTG26 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC-1 | TRAC1nuclear receptor co-repressor 2Affinity Capture-Western
Reconstituted Complex
Two-hybrid
BioGRID9256429 |9765306 
|14982881 
NCOR2CTG26 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC-1 | TRAC1nuclear receptor co-repressor 2SMRT interacts with PLZF. This interaction was modelled on a demonstrated interaction between SMRT and PLZF from unspecified species.BIND9486654 
NR3C1GCCR | GCR | GR | GRLnuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)-HPRD,BioGRID14521715 
PAFAH1B3-platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDaTwo-hybridBioGRID16169070 
PGAM5BXLBv68 | MGC5352phosphoglycerate mutase family member 5Two-hybridBioGRID16169070 
PLSCR1MMTRA1Bphospholipid scramblase 1Two-hybridBioGRID16189514 
PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 1Two-hybridBioGRID16169070 
PMLMYL | PP8675 | RNF71 | TRIM19promyelocytic leukemia-HPRD,BioGRID9294197 |11175338 
PSMD11MGC3844 | Rpn6 | S9 | p44.5proteasome (prosome, macropain) 26S subunit, non-ATPase, 11Two-hybridBioGRID16169070 
PSMD2MGC14274 | P97 | Rpn1 | S2 | TRAP2proteasome (prosome, macropain) 26S subunit, non-ATPase, 2Two-hybridBioGRID16169070 
QTRT1FP3235 | TGTqueuine tRNA-ribosyltransferase 1Two-hybridBioGRID16169070 
RAB27AGS2 | HsT18676 | MGC117246 | RAB27 | RAMRAB27A, member RAS oncogene familyTwo-hybridBioGRID16169070 
RARANR1B1 | RARretinoic acid receptor, alpha-HPRD,BioGRID14521715 
RB1OSRC | RB | p105-Rb | pRb | pp110retinoblastoma 1pRB interacts with PLZF.BIND15949438 
RUNX1T1AML1T1 | CBFA2T1 | CDR | ETO | MGC2796 | MTG8 | MTG8b | ZMYND2runt-related transcription factor 1; translocated to, 1 (cyclin D-related)-HPRD,BioGRID10688654 |11090081 
RXRAFLJ00280 | FLJ00318 | FLJ16020 | FLJ16733 | MGC102720 | NR2B1retinoid X receptor, alpha-HPRD8622986 
SIN3ADKFZp434K2235 | FLJ90319 | KIAA0700SIN3 homolog A, transcription regulator (yeast)-HPRD9627120 |11719366 
SIN3ADKFZp434K2235 | FLJ90319 | KIAA0700SIN3 homolog A, transcription regulator (yeast)Affinity Capture-Western
Reconstituted Complex
Two-hybrid
BioGRID9627120 |9765306 
|11719366 
SIN3ADKFZp434K2235 | FLJ90319 | KIAA0700SIN3 homolog A, transcription regulator (yeast)Sin3A interacts with PLZF. This interaction was modelled on a demonstrated interaction between mSin3A and PLZF from unspecified species.BIND9486654 
SIN3BKIAA0700SIN3 homolog B, transcription regulator (yeast)-HPRD,BioGRID9627120 
SP1-Sp1 transcription factor-HPRD12004059 
SPOPTEF2speckle-type POZ proteinTwo-hybridBioGRID16189514 
TERF1FLJ41416 | PIN2 | TRBF1 | TRF | TRF1 | hTRF1-AS | t-TRF1telomeric repeat binding factor (NIMA-interacting) 1Two-hybridBioGRID16169070 
THNSL2FLJ10916 | THS2 | TSH2threonine synthase-like 2 (S. cerevisiae)Two-hybridBioGRID16169070 
TOLLIPFLJ33531 | IL-1RAcPIPtoll interacting proteinTwo-hybridBioGRID16169070 
TRAF2MGC:45012 | TRAP | TRAP3TNF receptor-associated factor 2Two-hybridBioGRID16189514 
TRIM27RFP | RNF76tripartite motif-containing 27Two-hybridBioGRID16189514 
TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein-HPRD,BioGRID12821938 
VDRNR1I1vitamin D (1,25- dihydroxyvitamin D3) receptor-HPRD,BioGRID11719366 |12460926 
|14521715 
VTA1C6orf55 | DRG-1 | DRG1 | FLJ27228 | HSPC228 | LIP5 | My012 | SBP1Vps20-associated 1 homolog (S. cerevisiae)Two-hybridBioGRID16189514 
WDR33FLJ11294 | WDC146WD repeat domain 33Two-hybridBioGRID16169070 
ZBTB16PLZF | ZNF145zinc finger and BTB domain containing 16-HPRD,BioGRID8622986 
ZBTB32FAXF | FAZF | Rog | TZFP | ZNF538zinc finger and BTB domain containing 32-HPRD,BioGRID10572087 
ZNF24KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191zinc finger protein 24Two-hybridBioGRID16169070 


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
KEGG PATHWAYS IN CANCER 328259All SZGR 2.0 genes in this pathway
KEGG ACUTE MYELOID LEUKEMIA 6047All SZGR 2.0 genes in this pathway
BIOCARTA EGFR SMRTE PATHWAY 1111All SZGR 2.0 genes in this pathway
REACTOME IMMUNE SYSTEM 933616All SZGR 2.0 genes in this pathway
REACTOME ADAPTIVE IMMUNE SYSTEM 539350All SZGR 2.0 genes in this pathway
REACTOME CLASS I MHC MEDIATED ANTIGEN PROCESSING PRESENTATION 251156All SZGR 2.0 genes in this pathway
REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION 212129All SZGR 2.0 genes in this pathway
TURASHVILI BREAST DUCTAL CARCINOMA VS LOBULAR NORMAL DN 6943All SZGR 2.0 genes in this pathway
CHARAFE BREAST CANCER LUMINAL VS BASAL DN 455304All SZGR 2.0 genes in this pathway
DOANE RESPONSE TO ANDROGEN UP 184125All SZGR 2.0 genes in this pathway
GRABARCZYK BCL11B TARGETS UP 8140All SZGR 2.0 genes in this pathway
TONKS TARGETS OF RUNX1 RUNX1T1 FUSION HSC DN 187115All SZGR 2.0 genes in this pathway
HAHTOLA SEZARY SYNDROM DN 4226All SZGR 2.0 genes in this pathway
HAHTOLA MYCOSIS FUNGOIDES DN 1610All SZGR 2.0 genes in this pathway
ENK UV RESPONSE EPIDERMIS DN 508354All SZGR 2.0 genes in this pathway
CHEBOTAEV GR TARGETS UP 7762All SZGR 2.0 genes in this pathway
GRAESSMANN APOPTOSIS BY SERUM DEPRIVATION DN 234147All SZGR 2.0 genes in this pathway
MARTIN INTERACT WITH HDAC 4431All SZGR 2.0 genes in this pathway
MYLLYKANGAS AMPLIFICATION HOT SPOT 23 2413All SZGR 2.0 genes in this pathway
FARMER BREAST CANCER APOCRINE VS BASAL 330217All SZGR 2.0 genes in this pathway
MARTORIATI MDM4 TARGETS FETAL LIVER UP 227137All SZGR 2.0 genes in this pathway
GOUYER TATI TARGETS UP 107All SZGR 2.0 genes in this pathway
BENPORATH SUZ12 TARGETS 1038678All SZGR 2.0 genes in this pathway
BENPORATH EED TARGETS 1062725All SZGR 2.0 genes in this pathway
BENPORATH ES WITH H3K27ME3 1118744All SZGR 2.0 genes in this pathway
BENPORATH PRC2 TARGETS 652441All SZGR 2.0 genes in this pathway
ONDER CDH1 TARGETS 2 UP 256159All SZGR 2.0 genes in this pathway
ONDER CDH1 TARGETS 1 UP 14085All SZGR 2.0 genes in this pathway
ONDER CDH1 TARGETS 3 UP 1711All SZGR 2.0 genes in this pathway
CERVERA SDHB TARGETS 1 DN 3822All SZGR 2.0 genes in this pathway
LE EGR2 TARGETS DN 10884All SZGR 2.0 genes in this pathway
FERRANDO LYL1 NEIGHBORS 1512All SZGR 2.0 genes in this pathway
SANSOM APC TARGETS UP 12684All SZGR 2.0 genes in this pathway
SANSOM APC TARGETS DN 366238All SZGR 2.0 genes in this pathway
WANG IMMORTALIZED BY HOXA9 AND MEIS1 DN 2415All SZGR 2.0 genes in this pathway
MATSUDA NATURAL KILLER DIFFERENTIATION 475313All SZGR 2.0 genes in this pathway
YAGI AML FAB MARKERS 191131All SZGR 2.0 genes in this pathway
BLALOCK ALZHEIMERS DISEASE UP 16911088All SZGR 2.0 genes in this pathway
CHEN LVAD SUPPORT OF FAILING HEART UP 10369All SZGR 2.0 genes in this pathway
BURTON ADIPOGENESIS 4 4832All SZGR 2.0 genes in this pathway
LEE CALORIE RESTRICTION NEOCORTEX DN 8858All SZGR 2.0 genes in this pathway
VARELA ZMPSTE24 TARGETS UP 4030All SZGR 2.0 genes in this pathway
SARTIPY NORMAL AT INSULIN RESISTANCE DN 2111All SZGR 2.0 genes in this pathway
SARRIO EPITHELIAL MESENCHYMAL TRANSITION DN 154101All SZGR 2.0 genes in this pathway
RIGGI EWING SARCOMA PROGENITOR UP 430288All SZGR 2.0 genes in this pathway
SMID BREAST CANCER LUMINAL A UP 8452All SZGR 2.0 genes in this pathway
SMID BREAST CANCER BASAL DN 701446All SZGR 2.0 genes in this pathway
BONOME OVARIAN CANCER POOR SURVIVAL UP 3122All SZGR 2.0 genes in this pathway
BONOME OVARIAN CANCER SURVIVAL SUBOPTIMAL DEBULKING 510309All SZGR 2.0 genes in this pathway
MATZUK SPERMATOGONIA 2417All SZGR 2.0 genes in this pathway
BOQUEST STEM CELL CULTURED VS FRESH UP 425298All SZGR 2.0 genes in this pathway
GRESHOCK CANCER COPY NUMBER UP 323240All SZGR 2.0 genes in this pathway
BOYLAN MULTIPLE MYELOMA C D DN 252155All SZGR 2.0 genes in this pathway
SWEET LUNG CANCER KRAS DN 435289All SZGR 2.0 genes in this pathway
SHEDDEN LUNG CANCER GOOD SURVIVAL A4 196124All SZGR 2.0 genes in this pathway
MIKKELSEN MCV6 HCP WITH H3K27ME3 435318All SZGR 2.0 genes in this pathway
BOYLAN MULTIPLE MYELOMA PCA1 UP 10166All SZGR 2.0 genes in this pathway
HAHTOLA CTCL CUTANEOUS 2619All SZGR 2.0 genes in this pathway
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 8 4936All SZGR 2.0 genes in this pathway
MARTENS BOUND BY PML RARA FUSION 456287All SZGR 2.0 genes in this pathway
PILON KLF1 TARGETS DN 19721213All SZGR 2.0 genes in this pathway
LEE BMP2 TARGETS UP 745475All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY 1839928All SZGR 2.0 genes in this pathway