Search results: The pahtway p4438 has 1972 genes in the original annotation. Currently, there are 1213 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
80314EPC1Epl1enhancer of polycomb homolog 110p11CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
6840SVIL-supervillin10p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
10006ABI1ABI-1 | ABLBP4 | E3B1 | NAP1BP | SSH3BP | SSH3BP1abl interactor 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
219771CCNYC10orf9 | CBCP1 | CCNX | CFP1cyclin Y10p11.21CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
5305PIP4K2API5P4KA | PIP5K2A | PIP5KII-alpha | PIP5KIIA | PIPKphosphatidylinositol-5-phosphate 4-kinase, type II, alpha10p12.2Association
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10659CELF2BRUNOL3 | CUGBP2 | ETR-3 | ETR3 | NAPORCUGBP, Elav-like family member 210p13CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
55691FRMD4ACCAFCA | FRMD4 | bA295P9.4FERM domain containing 4A10p13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
83641FAM107BC10orf45family with sequence similarity 107 member B10p13CV:GWASdb
CV:PGCnp
1316KLF6BCD1 | CBA1 | COPEB | CPBP | GBF | PAC1 | ST12 | ZF9Kruppel-like factor 610p15Association
CV:PGCnp
DMG:Jaffe_2016
2665GDI2HEL-S-46e | RABGDIBGDP dissociation inhibitor 210p15CV:PGCnpINTRACELLULAR TRAFFICKING
CompositeSet
7570ZNF22HKR-T1 | KOX15 | ZNF422 | Zfp422zinc finger protein 2210q11CV:PGCnp
23283CSTF2TCstF-64Tcleavage stimulation factor, 3' pre-RNA, subunit 2, tau variant10q11CV:PGCnp
240ALOX55-LO | 5-LOX | 5LPG | LOG5arachidonate 5-lipoxygenase10q11.2CV:PGCnp
DMG:Jaffe_2016
5599MAPK8JNK | JNK-46 | JNK1 | JNK1A2 | JNK21B1/2 | PRKM8 | SAPK1 | SAPK1cmitogen-activated protein kinase 810q11.22CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
57705WDFY4C10orf64WDFY family member 410q11.23CV:GWASdb
CV:PGCnp
221035REEP3C10orf74 | Yip2breceptor accessory protein 310q21.3CV:PGCnp
DMG:Wockner_2014
84890ADOC10orf222-aminoethanethiol (cysteamine) dioxygenase10q21.3CV:PGCnp
Expression
PMID:cooccur
23411SIRT1SIR2 | SIR2L1 | SIR2alphasirtuin 110q21.3CV:PGCnp
GO_Annotation
PMID:cooccur
Chromatin Remodeling Genes
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5532PPP3CBCALNA2 | CALNB | CNA2 | PP2Bbetaprotein phosphatase 3 catalytic subunit beta10q22.2PMID:cooccurINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
26985AP3M1-adaptor related protein complex 3 mu 1 subunit10q22.2CV:PGCnp
PMID:cooccur
170384FUT11-fucosyltransferase 11 (alpha (1,3) fucosyltransferase)10q22.2DMG:Jaffe_2016
57178ZMIZ1MIZ | RAI17 | TRAFIP10 | ZIMP10 | hZIMP10zinc finger MIZ-type containing 110q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
10285SMNDC1SMNR | SPF30 | TDRD16Csurvival motor neuron domain containing 110q23CV:PGCnp
DMG:Jaffe_2016
3416IDEINSULYSINinsulin degrading enzyme10q23-q25CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
81619TSPAN14DC-TM4F2 | TM4SF14tetraspanin 1410q23.1CV:PGCnp
DEG:Zhao_2015
3257HPS1BLOC3S1 | HPSHPS1, biogenesis of lysosomal organelles complex 3 subunit 110q23.1-q23.3CV:PGCnp
PMID:cooccur
5728PTEN10q23del | BZS | CWS1 | DEC | GLM2 | MHAM | MMAC1 | PTEN1 | TEP1phosphatase and tensin homolog10q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
57559STAMBPL1ALMalpha | AMSH-FP | AMSH-LP | bA399O19.2STAM binding protein like 110q23.31DMG:Jaffe_2016
53354PANK1PANKpantothenate kinase 110q23.31CV:PGCnp
10556RPP30TSG15ribonuclease P/MRP 30kDa subunit10q23.31CV:PGCnp
64318NOC3LAD24 | C10orf117 | FAD24NOC3 like DNA replication regulator10q23.33CV:PGCnp
3087HHEXHEX | HMPH | HOX11L-PEN | PRH | PRHXhematopoietically expressed homeobox10q23.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
9060PAPSS2ATPSK2 | BCYM4 | SK23'-phosphoadenosine 5'-phosphosulfate synthase 210q24CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
56889TM9SF3EP70-P-iso | SMBPtransmembrane 9 superfamily member 310q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
10613ERLIN1C10orf69 | Erlin-1 | KE04 | KEO4 | SPFH1 | SPG62ER lipid raft associated 110q24.31CV:PGCnp
DMG:Jaffe_2016
55280CWF19L1C19L1 | SCAR17CWF19-like 1, cell cycle control (S. pombe)10q24.31CV:PGCnp
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
51684SUFUPRO1280 | SUFUH | SUFUXLSUFU negative regulator of hedgehog signaling10q24.32CV:PGCnp
23082PPRC1PRCperoxisome proliferator-activated receptor gamma, coactivator-related 110q24.32CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
84108PCGF6MBLR | RNF134polycomb group ring finger 610q24.33CV:PGCnp
LK:YES
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
9446GSTO1GSTO 1-1 | GSTTLp28 | HEL-S-21 | P28 | SPG-Rglutathione S-transferase omega 110q25.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
119392SFR1C10orf78 | MEI5 | MEIR5 | bA373N18.1SWI5 dependent homologous recombination repair protein 110q25.1CV:GWASdb
CV:PGCnp
51703ACSL5ACS2 | ACS5 | FACL5acyl-CoA synthetase long-chain family member 510q25.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
57700FAM160B1KIAA1600 | bA106M7.3family with sequence similarity 160 member B110q25.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
5791PTPREHPTPE | PTPE | R-PTP-EPSILONprotein tyrosine phosphatase, receptor type E10q26CV:PGCnp
GSMA_IIA
PMID:cooccur
9184BUB3BUB3L | hBUB3BUB3 mitotic checkpoint protein10q26CV:GWAScat
CV:PGCnp
GSMA_IIA
399818METTL10C10orf138methyltransferase like 1010q26.13CV:PGCnp
55761TTC17-tetratricopeptide repeat domain 1711p11.2CV:PGCnp
DMG:Jaffe_2016
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
26273FBXO3FBA | FBX3F-box protein 311p13CV:PGCnp
DMG:Wockner_2014
143458LDLRAD3LRAD3low density lipoprotein receptor class A domain containing 311p13CV:PGCnp
DNM:McCarthy_2014
4005LMO2RBTN2 | RBTNL1 | RHOM2 | TTG2LIM domain only 211p13CV:PGCnp
DMG:Jaffe_2016
4076CAPRIN1GPIAP1 | GPIP137 | GRIP137 | M11S1 | RNG105 | p137GPIcell cycle associated protein 111p13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
406ARNTLBMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5aryl hydrocarbon receptor nuclear translocator like11p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
3767KCNJ11BIR | HHF2 | IKATP | KIR6.2 | MODY13 | PHHI | TNDM3potassium voltage-gated channel subfamily J member 1111p15.1CV:GWASdb
CV:PGCnp
PMID:cooccur
5140PDE3BHcGIP1 | cGIPDE1phosphodiesterase 3B11p15.1CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
54503ZDHHC13HIP14L | HIP3RPzinc finger DHHC-type containing 1311p15.1CV:PGCnp
DMG:Wockner_2014
10196PRMT3HRMT1L3protein arginine methyltransferase 311p15.1CV:PGCnp
DMG:Jaffe_2016
2965GTF2H1BTF2 | P62 | TFB1 | TFIIHgeneral transcription factor IIH subunit 111p15.1-p14CV:PGCnp
Network
PMID:cooccur
22800RRAS2TC21related RAS viral (r-ras) oncogene homolog 211p15.2CV:PGCnp
DMG:Wockner_2014
6881TAF10TAF2A | TAF2H | TAFII30TATA-box binding protein associated factor 1011p15.3CV:PGCnp
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
50862RNF141ZFP26 | ZNF230ring finger protein 14111p15.4|11p15CV:PGCnp
DMG:Jaffe_2016
8519IFITM19-27 | CD225 | DSPA2a | IFI17 | LEU13interferon induced transmembrane protein 111p15.5DMG:Montano_2016
Expression
PMID:cooccur
4046LSP1WP34 | pp52lymphocyte-specific protein 111p15.5CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79026AHNAKAHNAKRSAHNAK nucleoprotein11q12.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
79073TMEM109-transmembrane protein 10911q12.2DMG:vanEijk_2014
55048VPS37C-VPS37C, ESCRT-I subunit11q12.2CV:GWASdb
CV:PGCnp
221092HNRNPUL2HNRPUL2 | SAF-A2heterogeneous nuclear ribonucleoprotein U-like 211q12.3DMG:Jaffe_2016
80789INTS5INT5 | KIAA1698integrator complex subunit 511q12.3CV:PGCnp
DNM:McCarthy_2014
84447SYVN1DER3 | HRD1synoviolin 111q13CV:PGCnp
DNM:Fromer_2014
CompositeSet
81622UNC93B1IIAE1 | UNC93 | UNC93B | Unc-93B1unc-93 homolog B1 (C. elegans)11q13CV:GWASdb
CV:PGCnp
9600PITPNM1DRES9 | NIR2 | PITPNM | RDGB | RDGB1 | RDGBA | RDGBA1 | Rd9phosphatidylinositol transfer protein membrane associated 111q13CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
DNM:Xu_2012
GO_Annotation
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
221ALDH3B1ALDH4 | ALDH7aldehyde dehydrogenase 3 family member B111q13CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
254102EHBP1L1-EH domain binding protein 1 like 111q13.1CV:PGCnp
84153RNASEH2CAGS3 | AYP1ribonuclease H2 subunit C11q13.1CV:PGCnp
283130SLC25A45-solute carrier family 25 member 4511q13.1CV:PGCnp
DMG:Wockner_2014
4296MAP3K11MEKK11 | MLK-3 | MLK3 | PTK1 | SPRKmitogen-activated protein kinase kinase kinase 1111q13.1-q13.3CV:PGCnp
DMG:Nishioka_2013
374403TBC1D10CCARABIN | EPI64CTBC1 domain family member 10C11q13.2CV:PGCnp
DMG:vanEijk_2014
10432RBM14COAA | PSP2 | SIP | SYTIP1 | TMEM137RNA binding motif protein 1411q13.2CV:PGCnp
DMG:Nishioka_2013
65003MRPL11CGI-113 | L11MT | MRP-L11mitochondrial ribosomal protein L1111q13.3CV:PGCnp
DMG:Nishioka_2013
5138PDE2ACGS-PDE | PDE2A1 | PED2A4 | cGSPDEphosphodiesterase 2A11q13.4CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
55004LAMTOR1C11orf59 | PDRO | Ragulator1 | p18 | p27RF-Rholate endosomal/lysosomal adaptor, MAPK and MTOR activator 111q13.4CV:PGCnp
6188RPS3S3ribosomal protein S311q13.4CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
23201FAM168AKIAA0280 | TCRP1family with sequence similarity 168 member A11q13.4CV:PGCnp
5058PAK1PAKalphap21 protein (Cdc42/Rac)-activated kinase 111q13.5-q14.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
10714POLD3P66 | P68 | PPP1R128polymerase (DNA) delta 3, accessory subunit11q14CV:PGCnp
65987KCTD14-potassium channel tetramerization domain containing 1411q14.1CV:GWASdb
CV:PGCnp
92105INTS4INT4 | MST093integrator complex subunit 411q14.1CV:PGCnp
PMID:cooccur
79053ALG8CDG1HALG8, alpha-1,3-glucosyltransferase11q14.1CV:PGCnp
9846GAB2-GRB2 associated binding protein 211q14.1CV:PGCnp
DMG:Wockner_2014
84233TMEM126AOPA7transmembrane protein 126A11q14.1CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
51503CWC15AD002 | C11orf5 | Cwf15 | HSPC148 | ORF5CWC15 spliceosome-associated protein11q21CV:PGCnp
DMG:Jaffe_2016
143684FAM76B-family with sequence similarity 76 member B11q21CV:PGCnp
330BIRC3AIP1 | API2 | CIAP2 | HAIP1 | HIAP1 | MALT2 | MIHC | RNF49 | c-IAP2baculoviral IAP repeat containing 311q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
5805PTSPTPS6-pyruvoyltetrahydropterin synthase11q22.3GO_Annotation
GSMA_I
PMID:cooccur
5962RDXDFNB24radixin11q23CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_I
7704ZBTB16PLZF | ZNF145zinc finger and BTB domain containing 1611q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
6653SORL1C11orf32 | LR11 | LRP9 | SORLA | SorLA-1 | gp250sortilin-related receptor, L(DLR class) A repeats containing11q23.2-q24.2CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
2542SLC37A4G6PT1 | G6PT2 | G6PT3 | GSD1b | GSD1c | GSD1d | PRO0685 | TRG-19 | TRG19solute carrier family 37 member 411q23.3CV:PGCnp
GSMA_I
23387SIK3L19 | QSK | SIK-3SIK family kinase 311q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
1656DDX6HLR2 | P54 | RCKDEAD-box helicase 611q23.3CV:PGCnp
CV:PheWAS
GSMA_I
22897CEP164NPHP15centrosomal protein 164kDa11q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
2113ETS1ETS-1 | EWSR2 | c-ets-1 | p54ETS proto-oncogene 1, transcription factor11q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
867CBLC-CBL | CBL2 | FRA11B | NSLL | RNF55Cbl proto-oncogene, E3 ubiquitin protein ligase11q23.3CV:PGCnp
GSMA_I
Network
PMID:cooccur
84881RPUSD4-RNA pseudouridylate synthase domain containing 411q24.2CV:PGCnp
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
23310NCAPD3CAP-D3 | CAPD3 | hCAP-D3 | hHCP-6 | hcp-6non-SMC condensin II complex subunit D311q25CV:PGCnp
DNM:McCarthy_2014
58516FAM60AC12orf14 | L4 | TERAfamily with sequence similarity 60 member A12p11CV:PGCnp
DMG:Montano_2016
1663DDX11CHL1 | CHLR1 | KRG2 | WABSDEAD/H-box helicase 1112p11CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
3845KRASC-K-RAS | CFC2 | K-RAS2A | K-RAS2B | K-RAS4A | K-RAS4B | KI-RAS | KRAS1 | KRAS2 | NS | NS3 | RALD | RASK2Kirsten rat sarcoma viral oncogene homolog12p12.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanPSP
CompositeSet
121536AEBP2-AE binding protein 212p12.3CV:PGCnp
DMG:Jaffe_2016
11171STRAPMAWD | PT-WD | UNRIPserine/threonine kinase receptor associated protein12p12.3CV:PGCnp
PMID:cooccur
4257MGST1GST12 | MGST | MGST-Imicrosomal glutathione S-transferase 112p12.3-p12.1CV:PGCnp
2120ETV6TEL | TEL/ABL | THC5ETS variant 612p13CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
894CCND2KIAK0002 | MPPH3cyclin D212p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
79887PLBD1-phospholipase B domain containing 112p13.1CV:PGCnp
55110MAGOHBMGN2 | mago | magohmago homolog B, exon junction complex core component12p13.2DMG:Jaffe_2016
65125WNK1HSAN2 | HSN2 | KDP | PPP1R167 | PRKWNK1 | PSK | p65WNK lysine deficient protein kinase 112p13.3CV:PGCnp
DEG:Maycox_2009
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
51347TAOK3DPK | JIK | MAP3K18TAO kinase 312qCV:PGCnp
196528ARID2BAF200 | p200AT-rich interaction domain 212q12CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
51535PPHLN1CR | HSPC206 | HSPC232periphilin 112q12CV:PGCnp
DMG:Nishioka_2013
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
466ATF1EWS-ATF1 | FUS/ATF-1 | TREB36activating transcription factor 112q13CV:PGCnp
6667SP1-Sp1 transcription factor12q13.1CV:PGCnp
Network
PMID:cooccur
79022TMEM106C-transmembrane protein 106C12q13.1CV:PGCnp
29843SENP1SuPr-2SUMO1/sentrin specific peptidase 112q13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
81539SLC38A1ATA1 | NAT2 | SAT1 | SNAT1solute carrier family 38 member 112q13.11CV:PGCnp
GO_Annotation
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
91012CERS5LASS5 | Trh4ceramide synthase 512q13.12CV:PGCnp
1975EIF4BEIF-4B | PRO1843eukaryotic translation initiation factor 4B12q13.13CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
84975MFSD5hsMOT2major facilitator superfamily domain containing 512q13.13CV:PGCnp
10193RNF41FLRF | NRDP1 | SBBI03ring finger protein 4112q13.13CV:PGCnp
DMG:Jaffe_2016
2583B4GALNT1GALGT | GALNACT | GalNAc-T | SPG26beta-1,4-N-acetyl-galactosaminyltransferase 112q13.3CV:PGCnp
DMG:Wockner_2014
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
10728PTGES3P23 | TEBP | cPGESprostaglandin E synthase 312q13.3|12CV:PGCnp
Network
PMID:cooccur
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
5908RAP1BK-REV | RAL1BRAP1B, member of RAS oncogene family12q14CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
23592LEMD3MAN1LEM domain containing 312q14CV:PGCnp
DMG:Jaffe_2016
11260XPOTXPO3exportin for tRNA12q14.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
8445DYRK2-dual specificity tyrosine phosphorylation regulated kinase 212q15CV:PGCnp
DMG:Montano_2016
8091HMGA2BABL | HMGI-C | HMGIC | LIPO | STQTL9high mobility group AT-hook 212q15CV:PGCnp
PMID:cooccur
55266TMEM19-transmembrane protein 1912q21.1CV:PGCnp
23011RAB21-RAB21, member RAS oncogene family12q21.1CV:PGCnp
DMG:Nishioka_2013
INTRACELLULAR TRAFFICKING
11103KRR1HRB2 | RIP-1KRR1, small subunit (SSU) processome component, homolog (yeast)12q21.2CV:GWASdb
CV:PGCnp
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
144455E2F7-E2F transcription factor 712q21.2CV:PGCnp
DMG:Wockner_2014
8693GALNT4GALNAC-T4 | GALNACT4polypeptide N-acetylgalactosaminyltransferase 412q21.33CV:PGCnp
DNM:Ambalavanan_2016
51559NT5DC3TU12B1-TY | TU12B1TY5'-nucleotidase domain containing 312q22-q23.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
2004ELK3ERP | NET | SAP-2 | SAP2ELK3, ETS transcription factor12q23CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
64431ACTR6ARP6 | CDA12 | HSPC281 | MSTP136 | hARP6 | hARPXARP6 actin-related protein 6 homolog (yeast)12q23.1CV:PGCnp
DMG:Nishioka_2013
283431GAS2L3G2L3growth arrest specific 2 like 312q23.1CV:PGCnp
DMG:Nishioka_2013
400ARL1ARFL1ADP ribosylation factor like GTPase 112q23.2CV:PGCnp
DMG:Jaffe_2016
Network
51019CCDC53CGI-116coiled-coil domain containing 5312q23.2CV:PGCnp
DMG:Jaffe_2016
Network
79158GNPTABGNPTA | ICDN-acetylglucosamine-1-phosphate transferase alpha and beta subunits12q23.2CV:PGCnp
DMG:Wockner_2014
4801NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y subunit beta12q23.3CV:PGCnp
DMG:Jaffe_2016
10970CKAP4CLIMP-63 | ERGIC-63 | p63cytoskeleton-associated protein 412q23.3CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
10154PLXNC1CD232 | PLXN-C1 | VESPRplexin C112q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
51699VPS29DC15 | DC7 | PEP11VPS29, retromer complex component12q24CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
6404SELPLGCD162 | CLA | PSGL-1 | PSGL1selectin P ligand12q24CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
11113CITCRIK | STK21citron rho-interacting serine/threonine kinase12q24CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9612NCOR2CTG26 | N-CoR2 | SMAP270 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC | TRAC-1 | TRAC1nuclear receptor corepressor 212q24CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
CompositeSet
Darnell FMRP targets
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
9815GIT2CAT-2 | CAT2 | PKLGIT ArfGAP 212q24.1CV:PGCnp
DMG:Jaffe_2016
5501PPP1CCPP-1G | PP1C | PPP1Gprotein phosphatase 1 catalytic subunit gamma12q24.1-q24.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
88455ANKRD13AANKRD13 | NY-REN-25ankyrin repeat domain 13A12q24.11CV:PGCnp
Expression
80018NAA25C12orf30 | MDM20 | NAP1N(alpha)-acetyltransferase 25, NatB auxiliary subunit12q24.13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
605BCL7ABCL7B-cell CLL/lymphoma 7A12q24.13CV:PGCnp
Expression
10645CAMKK2CAMKK | CAMKKBcalcium/calmodulin-dependent protein kinase kinase 212q24.2CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
217ALDH2ALDH-E2 | ALDHI | ALDMaldehyde dehydrogenase 2 family (mitochondrial)12q24.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
CompositeSet
23389MED13LMRFACD | PROSIT240 | THRAP2 | TRAP240Lmediator complex subunit 13 like12q24.21CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
5037PEBP1HCNP | HCNPpp | HEL-210 | HEL-S-34 | HEL-S-96 | PBP | PEBP | PEBP-1 | RKIPphosphatidylethanolamine binding protein 112q24.23CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5901RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family12q24.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
6249CLIP1CLIP | CLIP-170 | CLIP170 | CYLN1 | RSNCAP-Gly domain containing linker protein 112q24.3CV:PGCnp
DMG:Wockner_2014
55206SBNO1MOP3 | Snostrawberry notch homolog 1 (Drosophila)12q24.31CV:PGCnp
DNM:Girard_2011
LK:YES
PMID:cooccur
CompositeSet
9761MLECKIAA0152malectin12q24.31CV:PGCnp
DMG:Jaffe_2016
8099CDK2AP1DOC1 | DORC1 | ST19 | doc-1 | p12DOC-1cyclin-dependent kinase 2 associated protein 112q24.31CV:PGCnp
LK:YES
PMID:cooccur
51329ARL6IP4SFRS20 | SR-25 | SRp25 | SRrp37ADP ribosylation factor like GTPase 6 interacting protein 412q24.31CV:PGCnp
LK:YES
22877MLXIPMIR | MONDOA | bHLHe36MLX interacting protein12q24.31CV:PGCnp
DMG:Montano_2016
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
84678KDM2BCXXC2 | FBXL10 | Fbl10 | JHDM1B | PCCX2lysine demethylase 2B12q24.31CV:PGCnp
DMG:Wockner_2014
DNM:Girard_2011
CompositeSet
Chromatin Remodeling Genes
55596ZCCHC8-zinc finger CCHC-type containing 812q24.31CV:PGCnp
23141ANKLE2KIAA0692 | LEMD7 | Lem4 | MCPH16ankyrin repeat and LEM domain containing 212q24.33CV:PGCnp
DMG:Wockner_2014
55743CHFRRNF116 | RNF196checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase12q24.33CV:PGCnp
9107MTMR6-myotubularin related protein 613q12CV:PGCnp
DMG:Jaffe_2016
241ALOX5APFLAParachidonate 5-lipoxygenase activating protein13q12CV:GWASdb
CV:PGCnp
253832ZDHHC204933421L13Rik | DHHC-20zinc finger DHHC-type containing 2013q12.11CV:PGCnp
DMG:Jaffe_2016
10284SAP182HOR0202 | SAP18PSin3A associated protein 18kDa13q12.11DMG:Jaffe_2016
10129FRY13CDNA73 | 214K23.2 | C13orf14 | CG003 | bA207N4.2 | bA37E23.1FRY microtubule binding protein13q13.1CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
29880ALG5bA421P11.2ALG5, dolichyl-phosphate beta-glucosyltransferase13q13.3CV:GWASdb
10161LPAR6ARWH1 | HYPT8 | LAH3 | P2RY5 | P2Y5lysophosphatidic acid receptor 613q14CV:PGCnp
10206TRIM13CAR | DLEU5 | LEU5 | RFP2 | RNF77tripartite motif containing 1313q14CV:PGCnp
2308FOXO1FKH1 | FKHR | FOXO1Aforkhead box O113q14.1CV:PGCnp
DMG:Montano_2016
DNM:Guipponi_2014
Network
PMID:cooccur
11193WBP4FBP21WW domain binding protein 413q14.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
253512SLC25A30KMCP1solute carrier family 25 member 3013q14.13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
81602CDADC1NYD-SP15 | bA103J18.1cytidine and dCMP deaminase domain containing 113q14.2CV:PGCnp
DMG:Jaffe_2016
8803SUCLA2A-BETA | MTDPS5 | SCS-betaAsuccinate-CoA ligase, ADP-forming, beta subunit13q14.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3839KPNA3IPOA4 | SRP1 | SRP1gamma | SRP4 | hSRP1karyopherin subunit alpha 313q14.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
51028VPS36C13orf9 | CGI-145 | EAP45vacuolar protein sorting 36 homolog (S. cerevisiae)13q14.3CV:PGCnp
DMG:Jaffe_2016
10562OLFM4GC1 | GW112 | OLM4 | OlfD | UNQ362 | bA209J19.1 | hGC-1 | hOLfDolfactomedin 413q14.3CV:PGCnp
23077MYCBP2Myc-bp2 | PAM | PhrMYC binding protein 2, E3 ubiquitin protein ligase13q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
440145MZT1C13orf37 | MOZART1mitotic spindle organizing protein 113q22.1CV:PGCnp
115207KCTD12C13orf2 | PFET1 | PFETINpotassium channel tetramerization domain containing 1213q22.3CV:PGCnp
PMID:cooccur
EXCITABILITY
CompositeSet
8428STK24HEL-S-95 | MST3 | MST3B | STE20 | STK3serine/threonine kinase 2413q31.2-q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10257ABCC4MOAT-B | MOATB | MRP4ATP binding cassette subfamily C member 413q32CV:GWASdb
CV:PGCnp
5611DNAJC3ACPHD | ERdj6 | HP58 | P58 | P58IPK | PRKRIDnaJ heat shock protein family (Hsp40) member C313q32.1CV:PGCnp
3843IPO5IMB3 | KPNB3 | Pse1 | RANBP5 | imp5importin 513q32.2Association
CV:PGCnp
DMG:Jaffe_2016
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
9375TM9SF2P76transmembrane 9 superfamily member 213q32.3CV:PGCnp
DMG:Jaffe_2016
79070KDELC1EP58 | ERp58 | KDEL1KDEL motif containing 113q33CV:PGCnp
DMG:Nishioka_2013
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
5911RAP2AK-REV | KREV | RAP2 | RbBP-30RAP2A, member of RAS oncogene family13q34CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
3621ING1p24ING1c | p33 | p33ING1 | p33ING1b | p47 | p47ING1ainhibitor of growth family member 113q34CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
23250ATP11AATPIH | ATPISATPase phospholipid transporting 11A13q34CV:PGCnp
DMG:Wockner_2014
Expression
55608ANKRD10-ankyrin repeat domain 1013q34CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
7528YY1DELTA | INO80S | NF-E1 | UCRBP | YIN-YANG-1YY1 transcription factor14qCV:PGCnp
Network
PMID:cooccur
328APEX1APE | APE1 | APEN | APEX | APX | HAP1 | REF1apurinic/apyrimidinic endodeoxyribonuclease 114q11.2DMG:Nishioka_2013
GSMA_I
Network
11035RIPK3RIP3receptor interacting serine/threonine kinase 314q11.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GSMA_I
Network
171546SPTSSAC14orf147 | SSSPTAserine palmitoyltransferase small subunit A14q13.1CV:GWASdb
CV:PGCnp
4860PNPNP | PRO1837 | PUNPpurine nucleoside phosphorylase14q13.1CV:GWAScat
GSMA_I
Network
PMID:cooccur
55012PPP2R3CC14orf10 | G4-1 | G5prprotein phosphatase 2 regulatory subunit B'', gamma14q13.2CV:PGCnp
11177BAZ1AACF1 | WALp1 | WCRF180 | hACF1bromodomain adjacent to zinc finger domain 1A14q13.2CV:GWASdb
CV:PGCnp
6655SOS2NS9SOS Ras/Rho guanine nucleotide exchange factor 214q21CV:PGCnp
DNM:Gulsuner_2013
4247MGAT2CDG2A | CDGS2 | GLCNACTII | GNT-II | GNT2mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase14q21CV:PGCnp
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
254170FBXO33BMND12 | Fbx33 | c14_5247F-box protein 3314q21.1CV:PGCnp
122769LRR14-1BBLRR | LRR-1 | PPIL5leucine rich repeat protein 114q21.3CV:PGCnp
382ARF6-ADP ribosylation factor 614q21.3CV:PGCnp
Network
PMID:cooccur
51199NINSCKL7ninein14q22.1CV:GWASdb
CV:PGCnp
CV:PheWAS
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
93487MAPK1IP1LC14orf32 | MISS | c14_5346mitogen-activated protein kinase 1 interacting protein 1-like14q22.3CV:PGCnp
5684PSMA3HC8 | PSC3proteasome subunit alpha 314q23CV:PGCnp
Network
7597ZBTB25C14orf51 | KUP | ZNF46zinc finger and BTB domain containing 2514q23-q24CV:PGCnp
DMG:Wockner_2014
5529PPP2R5E-protein phosphatase 2 regulatory subunit B', epsilon14q23.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
51528JKAMPC14orf100 | CDA06 | HSPC213 | HSPC327 | JAMPJNK1/MAPK8-associated membrane protein14q23.1CV:PGCnp
Expression
81537SGPP1SPPase1sphingosine-1-phosphate phosphatase 114q23.2CV:PGCnp
PMID:cooccur
22890ZBTB1ZNF909zinc finger and BTB domain containing 114q23.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
10243GPHNGEPH | GPH | GPHRYN | HKPX1 | MOCODCgephyrin14q23.3CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
26037SIPA1L1E6TP1signal-induced proliferation-associated 1 like 114q24.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
55333SYNJ2BPARIP2 | OMP25synaptojanin 2 binding protein14q24.2CV:PGCnp
2530FUT8-fucosyltransferase 8 (alpha (1,6) fucosyltransferase)14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10972TMED10P24(DELTA) | S31I125 | S31III125 | TMP21 | Tmp-21-I | p23 | p24d1transmembrane p24 trafficking protein 1014q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
51077FCF1Bka | C14orf111 | CGI-35 | UTP24FCF1 rRNA-processing protein14q24.3CV:PGCnp
Expression
10577NPC2EDDM1 | HE1Niemann-Pick disease, type C214q24.3CV:PGCnp
PMID:cooccur
87ACTN1BDPLT15actinin alpha 114q24|14q22-q24CV:PGCnp
CV:PheWAS
DMG:Nishioka_2013
DNM:Fromer_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
2957GTF2A1TF2A1 | TFIIA | TFIIA-42 | TFIIALgeneral transcription factor IIA 114q31.1CV:GWASdb
CV:PGCnp
1112FOXN3C14orf116 | CHES1 | PRO1635forkhead box N314q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
440193CCDC88CDAPLE | HKRP2 | KIAA1509 | SCA40coiled-coil domain containing 88C14q32.11CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
801CALM1CALML2 | CAMI | CPVT4 | DD132 | LQT14 | PHKD | caMcalmodulin 1 (phosphorylase kinase, delta)14q32.11ADT:Sun_2012
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_mGluR5
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
79890RIN3-Ras and Rab interactor 314q32.12CV:PGCnp
DMG:Wockner_2014
55727BTBD7FUP1BTB domain containing 714q32.12CV:PGCnp
DMG:vanEijk_2014
55148UBR7C14orf130ubiquitin protein ligase E3 component n-recognin 7 (putative)14q32.12CV:PGCnp
23405DICER1DCR1 | Dicer | Dicer1e | HERNA | K12H4.8-LIKE | MNG1 | RMSE2dicer 1 ribonuclease III14q32.13CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
23186RCOR1COREST | RCORREST corepressor 114q32.31CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
4140MARK3CTAK1 | KP78 | PAR1A | Par-1amicrotubule affinity regulating kinase 314q32.32CV:PGCnp
DMG:vanEijk_2014
Potential synaptic genes
207AKT1AKT | CWS6 | PKB | PKB-ALPHA | PRKBA | RAC | RAC-ALPHAv-akt murine thymoma viral oncogene homolog 114q32.32Association
Core
CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Fromer_2014
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7187TRAF3CAP-1 | CAP1 | CD40bp | CRAF1 | IIAE5 | LAP1TNF receptor associated factor 314q32.32CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
1396CRIP1CRHP | CRIP | CRP-1 | CRP1cysteine rich protein 114q32.33DMG:Wockner_2014
55038CDCA4HEPP | SEI-3/HEPPcell division cycle associated 414q32.33DMG:Wockner_2014
8554PIAS1DDXBP1 | GBP | GU/RH-II | ZMIZ3protein inhibitor of activated STAT 115qCV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
6218RPS17DBA4 | RPS17L | RPS17L1 | RPS17L2 | S17ribosomal protein S1715qPMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
23191CYFIP1P140SRA-1 | SHYC | SRA-1 | SRA1cytoplasmic FMR1 interacting protein 115q11CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
283742FAM98B-family with sequence similarity 98 member B15q14CV:PGCnp
55505NOP10DKCB1 | NOLA3 | NOP10PNOP10 ribonucleoprotein15q14-q15CV:PGCnp
3712IVDACAD2isovaleryl-CoA dehydrogenase15q14-q15CV:PGCnp
PMID:cooccur
27229TUBGCP476P | GCP-4 | GCP4 | Grip76 | MCCRP3tubulin gamma complex associated protein 415q15CV:PGCnp
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
7158TP53BP153BP1 | TDRD30 | TP53 | p202 | p53BP1tumor protein p53 binding protein 115q15-q21CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
23168RTF1GTL7 | KIAA0252RTF1 homolog, Paf1/RNA polymerase II complex component15q15.1CV:PGCnp
DMG:Jaffe_2016
54617INO80INO80A | INOC1 | hINO80INO80 complex subunit15q15.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
79968WDR76CDW14WD repeat domain 7615q15.3CV:PGCnp
Expression
4236MFAP1-microfibrillar associated protein 115q15.3CV:PGCnpAscano FMRP targets
51496CTDSPL2HSPC058 | HSPC129CTD small phosphatase like 215q15.3-q21.1CV:PGCnp
54778RNF111ARKring finger protein 11115q21CV:PGCnp
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
84888SPPL2AIMP3 | PSL2signal peptide peptidase like 2A15q21.2CV:PGCnp
PMID:cooccur
2553GABPB1BABPB2 | E4TF1 | E4TF1-47 | E4TF1-53 | E4TF1B | GABPB | GABPB-1 | GABPB2 | NRF2B1 | NRF2B2GA binding protein transcription factor beta subunit 115q21.2CV:PGCnp
DMG:Jaffe_2016
29766TMOD3UTMODtropomodulin 315q21.2CV:PGCnp
DMG:Jaffe_2016
10776ARPP19ARPP-16 | ARPP-19 | ARPP16 | ENSALcAMP regulated phosphoprotein 19kDa15q21.2CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
Expression
GO_Annotation
64864RFX7RFXDC2regulatory factor X715q21.3CV:PGCnp
DMG:Jaffe_2016
102ADAM10AD10 | AD18 | CD156c | CDw156 | HsT18717 | MADM | RAK | kuzADAM metallopeptidase domain 1015q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10116FEM1BF1A-ALPHA | F1AA | FEM1-betafem-1 homolog b (C. elegans)15q22DMG:Nishioka_2013
114294LACTBG24 | MRPL56lactamase beta15q22.1CV:PGCnp
51762RAB8B-RAB8B, member RAS oncogene family15q22.2CV:PGCnpINTRACELLULAR TRAFFICKING
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
84191FAM96A-family with sequence similarity 96 member A15q22.31CV:PGCnp
Expression
10933MORF4L1Eaf3 | FWP006 | HsT17725 | MEAF3 | MORFRG15 | MRG15 | S863-6mortality factor 4 like 115q24CV:PGCnp
DMG:Wockner_2014
53339BTBD1C15orf1 | NS5ATP8BTB domain containing 115q24CV:PGCnp
53346TM6SF1-transmembrane 6 superfamily member 115q24-q26CV:PGCnp
23102TBC1D2B-TBC1 domain family member 2B15q24.3-q25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
11214AKAP13AKAP-13 | AKAP-Lbc | ARHGEF13 | BRX | HA-3 | Ht31 | LBC | PRKA13 | PROTO-LB | PROTO-LBC | c-lbc | p47A-kinase anchoring protein 1315q25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4122MAN2A2MANA2Xmannosidase alpha class 2A member 215q26.1CV:PGCnpCompositeSet
Darnell FMRP targets
9055PRC1ASE1protein regulator of cytokinesis 115q26.1CV:PGCnp
140460ASB7-ankyrin repeat and SOCS box containing 715q26.3CV:PGCnp
DMG:Jaffe_2016
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
6627SNRPA1Lea1small nuclear ribonucleoprotein polypeptide A'15q26.3CV:PGCnp
DMG:Wockner_2014
2521FUSALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLSFUS RNA binding protein16p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
64319FBRSFBS | FBS1fibrosin16p11.2DMG:Jaffe_2016
GSMA_IIE
6693SPNCD43 | GALGP | GPL115 | LSNsialophorin16p11.2CNV:YES
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
29108PYCARDASC | CARD5 | TMS | TMS-1 | TMS1PYD and CARD domain containing16p11.2CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
CompositeSet
283897C16orf54-chromosome 16 open reading frame 5416p11.2CNV:YES
CV:PGCnp
GSMA_IIE
27327TNRC6ACAGH26 | GW1 | GW182 | TNRC6trinucleotide repeat containing 6A16p11.2CV:PGCnp
GSMA_IIE
5579PRKCBPKC-beta | PKCB | PRKCB1 | PRKCB2protein kinase C beta16p11.2CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
22928SEPHS2SPS2 | SPS2bselenophosphate synthetase 216p11.2CV:PGCnp
GSMA_IIE
3683ITGALCD11A | LFA-1 | LFA1Aintegrin subunit alpha L16p11.2CV:PGCnp
GO_Annotation
GSMA_IIE
25970SH2B1PSM | SH2BSH2B adaptor protein 116p11.2CV:PGCnp
Expression
GSMA_IIE
PMID:cooccur
1201CLN3BTS | JNCLceroid-lipofuscinosis, neuronal 316p12.1DMG:Jaffe_2016
DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
PMID:cooccur
51108METTL9CGI-81 | DREV | DREV1 | PAP1methyltransferase like 916p12.2CV:PGCnp
GSMA_IIE
10261IGSF6DORAimmunoglobulin superfamily member 616p12.2CV:PGCnp
GSMA_IIE
112479ERI2EXOD1 | ZGRF5ERI1 exoribonuclease family member 216p12.3CV:PGCnp
GSMA_IIE
55623THUMPD1Tan1THUMP domain containing 116p12.3CV:PGCnp
GSMA_IIE
4363ABCC1ABC29 | ABCC | GS-X | MRP | MRP1ATP binding cassette subfamily C member 116p13.1CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
54820NDE1HOM-TES-87 | LIS4 | MHAC | NDE | NUDE | NUDE1nudE neurodevelopment protein 116p13.11CNV:YES
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
10607TBL3SAZD | UTP13transducin (beta)-like 316p13.3CV:PGCnp
10921RNPS1E5.1RNA binding protein S1, serine-rich domain16p13.3CV:PGCnp
DMG:Nishioka_2013
9742IFT140MZSDS | SRTD9 | WDTC2 | c305C8.4 | c380F5.1 | gs114intraflagellar transport 14016p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
79585CORO70610011B16Rik | CRN7 | POD1coronin 716p13.3CV:PGCnp
DMG:Wockner_2014
55692LUC7LLUC7B1 | Luc7 | SR+89 | hLuc7B1LUC7-like16p13.3CV:PGCnp
90861HN1LC16orf34 | L11hematological and neurological expressed 1-like16p13.3CV:PGCnp
DMG:Wockner_2014
8312AXIN1AXIN | PPP1R49axin 116p13.3CV:PGCnp
DMG:Wockner_2014
Network
Ascano FMRP targets
7874USP7HAUSP | TEF1ubiquitin specific peptidase 7 (herpes virus-associated)16p13.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
Ascano FMRP targets
57407NMRAL1HSCARG | SDR48A1NmrA-like family domain containing 116p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79801SHCBP1PALSHC SH2-domain binding protein 116q11.2CV:PGCnp
GSMA_IIE
55737VPS35MEM3 | PARK17VPS35, retromer complex component16q12CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
113ADCY7AC7adenylate cyclase 716q12.1CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
124460SNX20SLIC1sorting nexin 2016q12.1CV:PGCnp
1540CYLDBRSS | CDMT | CYLD1 | CYLDI | EAC | MFT | MFT1 | SBS | TEM | USPL2CYLD lysine 63 deubiquitinase16q12.1CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
10294DNAJA2CPR3 | DJ3 | DJA2 | DNAJ | DNJ3 | HIRIP4 | PRO3015 | RDJ2DnaJ heat shock protein family (Hsp40) member A216q12.1CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
5934RBL2P130 | Rb2retinoblastoma-like 216q12.2CV:PGCnp
89970RSPRY1SEMDFAring finger and SPRY domain containing 116q13CV:PGCnp
1459CSNK2A2CK2A2 | CK2alpha' | CSNK2A1casein kinase 2 alpha 216q21CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
23019CNOT1AD-005 | CDC39 | NOT1 | NOT1HCCR4-NOT transcription complex subunit 116q21CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
51388NIP7CGI-37 | HSPC031 | KD93NIP7, nucleolar pre-rRNA processing protein16q22.1CV:PGCnp
DNM:McCarthy_2014
10204NUTF2NTF2 | PP15nuclear transport factor 216q22.1CV:PGCnp
1783DYNC1LI2DNCLI2 | LIC2dynein cytoplasmic 1 light intermediate chain 216q22.1CV:PGCnpCompositeSet
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
5699PSMB10LMP10 | MECL1 | beta2iproteasome subunit beta 1016q22.1CV:PGCnp
Expression
80262C16orf70C16orf6 | LIN10 | lin-10chromosome 16 open reading frame 7016q22.1CV:PGCnp
PMID:cooccur
23659PLA2G15ACS | GXVPLA2 | LLPL | LPLA2 | LYPLA3phospholipase A2 group XV16q22.1CV:PGCnpAscano FMRP targets
3240HPBP | HP2ALPHA2 | HPA1Shaptoglobin16q22.2Association
Core
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
164AP1G1ADTG | CLAPG1adaptor related protein complex 1 gamma 1 subunit16q23CV:PGCnp
DMG:Jaffe_2016
55159RFWD3RNF201ring finger and WD repeat domain 316q23.1CV:PGCnp
863CBFA2T3ETO2 | MTG16 | MTGR2 | ZMYND4core-binding factor, runt domain, alpha subunit 2; translocated to, 316q24CV:PGCnp
DMG:Wockner_2014
5336PLCG2APLAID | FCAS3 | PLC-IV | PLC-gamma-2phospholipase C gamma 216q24.1CV:GWASdb
CV:PGCnp
PMID:cooccur
3394IRF8H-ICSBP | ICSBP | ICSBP1 | IMD32A | IMD32B | IRF-8interferon regulatory factor 816q24.1CV:PGCnp
11216AKAP10AKAP-10 | D-AKAP-2 | D-AKAP2 | PRKA10A-kinase anchoring protein 1017p11.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
224ALDH3A2ALDH10 | FALDH | SLSaldehyde dehydrogenase 3 family member A217p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1352COX10-COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor17p12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
409ARRB2ARB2 | ARR2 | BARR2arrestin, beta 217p13CV:PGCnp
DNM:Guipponi_2014
PMID:cooccur
359845FAM101BCFM1family with sequence similarity 101 member B17p13CV:GWASdb
CV:PGCnp
84316NAA38LSMD1 | PFAAP2N(alpha)-acetyltransferase 38, NatC auxiliary subunit17p13.1CV:PGCnp
DMG:Jaffe_2016
7326UBE2G1E217K | UBC7 | UBE2Gubiquitin conjugating enzyme E2 G117p13.2CV:PGCnp
23140ZZEF1ZZZ4zinc finger ZZ-type and EF-hand domain containing 117p13.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
56919DHX33DDX33DEAH-box helicase 3317p13.2CV:PGCnpAscano FMRP targets
64359NXNNRX | TRG-4nucleoredoxin17p13.3CV:PGCnp
DMG:Wockner_2014
23108RAP1GAP2GARNL4 | RAP1GA3RAP1 GTPase activating protein 217p13.3CV:PGCnp
DMG:Montano_2016
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5306PITPNAHEL-S-36 | PI-TPalpha | PITPN | VIB1Aphosphatidylinositol transfer protein alpha17p13.3CV:PGCnp
DMG:Wockner_2014
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
51479ANKFY1ANKHZN | BTBD23 | ZFYVE14ankyrin repeat and FYVE domain containing 117p13.3CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Ascano FMRP targets
7531YWHAE14-3-3E | HEL2 | KCIP-1 | MDCR | MDStyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon17p13.3Association
CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
9527GOSR1GOLIM2 | GOS-28 | GOS28 | GOS28/P28 | GS28 | P28golgi SNAP receptor complex member 117q11CV:PGCnp
GO_Annotation
3927LASP1Lasp-1 | MLN50LIM and SH3 protein 117q11-q21.3CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
6776STAT5AMGF | STAT5signal transducer and activator of transcription 5A17q11.2CV:PGCnp
DMG:Wockner_2014
Network
55813UTP6C17orf40 | HCA66UTP6, small subunit processome component17q11.2CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
85464SSH2SSH-2 | SSH-2Lslingshot protein phosphatase 217q11.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
5469MED1CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2mediator complex subunit 117q12CV:PGCnp
84961FBXL20Fbl2 | Fbl20F-box and leucine-rich repeat protein 2017q12CV:PGCnpPotential synaptic genes
1267CNPCNP12',3'-cyclic nucleotide 3' phosphodiesterase17q21Association
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
31ACACAACAC | ACACAD | ACC | ACC1 | ACCAacetyl-CoA carboxylase alpha17q21CNV:YES
CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
1655DDX5G17P1 | HLR1 | HUMP68 | p68DEAD-box helicase 517q21CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
6155RPL27L27ribosomal protein L2717q21CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
6605SMARCE1BAF57SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 117q21.2CV:PGCnp
Network
PMID:cooccur
Chromatin Remodeling Genes
4830NME1AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1NME/NM23 nucleoside diphosphate kinase 117q21.3CV:PGCnpCELL METABOLISM
CompositeSet
56970ATXN7L3-ataxin 7 like 317q21.31DMG:Jaffe_2016
79877DCAKD-dephospho-CoA kinase domain containing17q21.31CV:GWASdb
CV:PGCnp
23131GPATCH8GPATC8 | KIAA0553G-patch domain containing 817q21.31CV:PGCnp
9343EFTUD2MFDGA | MFDM | SNRNP116 | Snrp116 | Snu114 | U5-116KDelongation factor Tu GTP binding domain containing 217q21.31CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
55181SMG8C17orf71SMG8 nonsense mediated mRNA decay factor17q22CV:PGCnp
51649MRPS23CGI-138 | HSPC329 | MRP-S23mitochondrial ribosomal protein S2317q22CV:PGCnp
DMG:Jaffe_2016
9110MTMR4FYVE-DSP2 | ZFYVE11myotubularin related protein 417q22CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
8161COILCLN80 | p80-coilincoilin17q22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
7716VEZF1DB1 | ZNF161vascular endothelial zinc finger 117q22CV:PGCnp
DMG:Jaffe_2016
348235SKA2FAM33Aspindle and kinetochore associated complex subunit 217q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
64750SMURF2-SMAD specific E3 ubiquitin protein ligase 217q22-q23CV:PGCnp
DMG:Jaffe_2016
8493PPM1DPP2C-DELTA | WIP1protein phosphatase, Mg2+/Mn2+ dependent 1D17q23.2DMG:Nishioka_2013
DMG:Wockner_2014
10513APPBP2APP-BP2 | HS.84084 | PAT1amyloid beta precursor protein binding protein 217q23.2CV:PGCnp
DMG:Jaffe_2016
4215MAP3K3MAPKKK3 | MEKK3mitogen-activated protein kinase kinase kinase 317q23.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
55852TEX2HT008 | TMEM96testis expressed 217q23.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5635PRPSAP1PAP39phosphoribosyl pyrophosphate synthetase-associated protein 117q24-q25CV:PGCnp
DMG:Jaffe_2016
26207PITPNC1M-RDGB-beta | MRDGBbeta | RDGB-BETA | RDGBB | RDGBB1phosphatidylinositol transfer protein, cytoplasmic 117q24.2CV:PGCnp
DMG:Wockner_2014
10672GNA13G13G protein subunit alpha 1317q24.3CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
1453CSNK1DASPS | CKIdelta | FASPS2 | HCKIDcasein kinase 1 delta17q25DMG:Wockner_2014
Network
PMID:cooccur
146722CD300LFCD300f | CLM-1 | CLM1 | IREM-1 | IREM1 | IgSF13 | LMIR3 | NKIRCD300 molecule like family member f17q25.1CV:PheWAS
Expression
124599CD300LBCD300b | CLM-7 | CLM7 | CMRF35-A2 | IREM-3 | IREM3 | TREM-5 | TREM5CD300 molecule like family member b17q25.1CV:PGCnp
DMG:vanEijk_2014
9368SLC9A3R1EBP50 | NHERF | NHERF-1 | NHERF1 | NPHLOP2SLC9A3 regulator 117q25.1DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
ION BALANCE
CompositeSet
9775EIF4A3DDX48 | MUK34 | NMP265 | NUK34 | RCPS | eIF4AIIIeukaryotic translation initiation factor 4A317q25.3CV:PGCnp
PMID:cooccur
57690TNRC6C-trinucleotide repeat containing 6C17q25.3CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
84733CBX2CDCA6 | M33 | SRXY5chromobox 217q25.3CV:GWASdb
CV:PGCnp
Expression
Ascano FMRP targets
Chromatin Remodeling Genes
339230CCDC137RaRFcoiled-coil domain containing 13717q25.3CV:PGCnp
DNM:Girard_2011
CompositeSet
6904TBCDSSD-1 | tfcDtubulin folding cofactor D17q25.3CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
3613IMPA2-inositol(myo)-1(or 4)-monophosphatase 218p11.2Association
CV:PGCnp
CV:PheWAS
PMID:cooccur
65258MPPE1PGAP5metallophosphoesterase 118p11.21CV:PGCnp
DMG:Nishioka_2013
56984PSMG2CLAST3 | HCCA3 | HsT1707 | MDS003 | PAC2 | TNFSF5IP1proteasome (prosome, macropain) assembly chaperone 218p11.21CV:GWASdb
CV:PGCnp
57132CHMP1BC10orf2 | C18-ORF2 | C18orf2 | CHMP1.5 | Vps46-2 | Vps46B | hVps46-2charged multivesicular body protein 1B18p11.21CV:PGCnp
9989PPP4R1MEG1 | PP4(Rmeg) | PP4R1protein phosphatase 4 regulatory subunit 118p11.22CV:PGCnpAscano FMRP targets
11031RAB31Rab22BRAB31, member RAS oncogene family18p11.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression
INTRACELLULAR TRAFFICKING
103910MYL12BMLC-B | MRLC2myosin light chain 12B18p11.31CV:GWASdb
CV:PGCnp
Potential synaptic genes
9331B4GALT6B4Gal-T6 | beta4Gal-T6UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 618q11CV:PGCnp
PMID:cooccur
8780RIOK3SUDDRIO kinase 318q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
10982MAPRE2CSCSC2 | EB1 | EB2 | RP1microtubule associated protein RP/EB family member 218q12.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
55197RPRD1AHsT3101 | P15RSregulation of nuclear pre-mRNA domain containing 1A18q12.2CV:PGCnp
25800SLC39A6LIV-1 | ZIP6solute carrier family 39 member 618q12.2CV:PGCnp
125476INO80CC18orf37 | IES6 | hIes6INO80 complex subunit C18q12.2CV:PGCnp
4152MBD1CXXC3 | PCM1 | RFTmethyl-CpG binding domain protein 118q21CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
4087SMAD2JV18 | JV18-1 | MADH2 | MADR2 | hMAD-2 | hSMAD2SMAD family member 218q21.1CV:PGCnp
Network
PMID:cooccur
4089SMAD4DPC4 | JIP | MADH4 | MYHRSSMAD family member 418q21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
2531KDSRDHSR | FVT1 | SDR35C13-ketodihydrosphingosine reductase18q21.3CV:PGCnp
3998LMAN1ERGIC-53 | ERGIC53 | F5F8D | FMFD1 | MCFD1 | MR60 | gp58lectin, mannose binding 118q21.3-q22CV:GWASdb
CV:PGCnp
90701SEC11CSEC11L3 | SPC21 | SPCS4CSEC11 homolog C, signal peptidase complex subunit18q21.32CV:GWASdb
CV:PGCnp
GO_Annotation
54495TMX3PDIA13 | TXNDC10thioredoxin related transmembrane protein 318q22CV:GWAScat
CV:GWASdb
CV:PGCnp
10194TSHZ1CAA | NY-CO-33 | SDCCAG33 | TSH1teashirt zinc finger homeobox 118q22.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
55628ZNF407-zinc finger protein 40718q23CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
4155MBP-myelin basic protein18q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
10907TXNL4ABMKS | DIB1 | DIM1 | SNRNP15 | TXNL4 | U5-15kDthioredoxin like 4A18q23CV:PGCnp
4772NFATC1NF-ATC | NF-ATc1.2 | NFAT2 | NFATcnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 118q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
Network
57153SLC44A2CTL2 | PP1292solute carrier family 44 member 219p13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
79016DDA1C19orf58 | PCIA1DET1 and DDB1 associated 119p13.11CV:PGCnp
DMG:Wockner_2014
79939SLC35E1-solute carrier family 35 member E119p13.11DMG:Nishioka_2013
5976UPF1HUPF1 | NORF1 | RENT1 | pNORF1 | smg-2UPF1, RNA helicase and ATPase19p13.11CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
54815GATAD2Ap66alphaGATA zinc finger domain containing 2A19p13.11CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Wockner_2014
LK:YES
8907AP1M1AP47 | CLAPM2 | CLTNM | MU-1Aadaptor related protein complex 1 mu 1 subunit19p13.12CV:PGCnpENDOCYTOSIS
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
55621TRMT1TRM1tRNA methyltransferase 119p13.2CV:PGCnp
84337ELOF1ELF1elongation factor 1 homolog19p13.2CV:PGCnp
DMG:Jaffe_2016
255809C19orf38HIDE1chromosome 19 open reading frame 3819p13.2CV:PGCnp
DMG:Wockner_2014
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
90007MIDN-midnolin19p13.3DMG:Jaffe_2016
DMG:vanEijk_2014
84939MUM1EXPAND1 | HSPC211 | MUM-1melanoma associated antigen (mutated) 119p13.3CV:PGCnp
DMG:Jaffe_2016
29128UHRF1ICBP90 | Np95 | RNF106 | TDRD22 | hNP95 | hUHRF1 | huNp95ubiquitin like with PHD and ring finger domains 119p13.3CV:PGCnp
DMG:Wockner_2014
10148EBI3IL-27B | IL27BEpstein-Barr virus induced 319p13.3CV:PGCnp
DMG:Wockner_2014
23526HMHA1ARHGAP45 | HA-1 | HLA-HA1histocompatibility (minor) HA-119p13.3CV:PGCnp
DEG:Zhao_2015
9667SAFB2-scaffold attachment factor B219p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
126308MOB3AMOB1C | MOBKL2A | moblakMOB kinase activator 3A19p13.3DEG:Zhao_2015
2867FFAR2FFA2R | GPR43free fatty acid receptor 219q13.1CV:PGCnp
DMG:Wockner_2014
7040TGFB1CED | DPD1 | LAP | TGFB | TGFbetatransforming growth factor beta 119q13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
56915EXOSC5RRP41B | RRP46 | Rrp46p | hRrp46p | p12Bexosome component 519q13.1CV:PGCnp
26065LSM14AC19orf13 | FAM61A | RAP55 | RAP55ALSM14A mRNA processing body assembly factor19q13.11CV:PGCnp
9710KIAA0355-KIAA035519q13.11CV:PGCnp
DMG:Montano_2016
1155TBCBCG22 | CKAP1 | CKAPItubulin folding cofactor B19q13.11-q13.12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
7305TYROBPDAP12 | KARAP | PLOSLTYRO protein tyrosine kinase binding protein19q13.12PMID:cooccur
84807NFKBIDIkappaBNS | TA-NFKBHNFKB inhibitor delta19q13.12PMID:cooccur
23094SIPA1L3CTRCT45 | SPAL3 | SPAR3signal-induced proliferation-associated 1 like 319q13.13CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
126432RINL-Ras and Rab interactor like19q13.2CV:PGCnp
DMG:Wockner_2014
945CD33SIGLEC-3 | SIGLEC3 | p67CD33 molecule19q13.3CV:GWASdb
CV:PGCnp
PMID:cooccur
6510SLC1A5AAAT | ASCT2 | ATBO | M7V1 | M7VS1 | R16 | RDRCsolute carrier family 1 member 519q13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10055SAE1AOS1 | HSPC140 | SUA1 | UBLE1ASUMO1 activating enzyme subunit 119q13.32CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
8993PGLYRP1PGLYRP | PGRP | PGRP-S | PGRPS | TAG7 | TNFSF3Lpeptidoglycan recognition protein 119q13.32DMG:Wockner_2014
9476NAPSAKAP | Kdap | NAP1 | NAPA | SNAPAnapsin A aspartic peptidase19q13.33CV:PGCnp
10155TRIM28KAP1 | PPP1R157 | RNF96 | TF1B | TIF1Btripartite motif containing 2819q13.4CV:PGCnpAscano FMRP targets
6203RPS9S9ribosomal protein S919q13.4CV:PGCnpRNA AND PROTEIN SYNTHESIS
4818NKG7GIG1 | GMP-17 | p15-TIA-1natural killer cell granule protein 719q13.41DMG:vanEijk_2014
5518PPP2R1AMRD36 | PP2A-Aalpha | PP2AAALPHA | PR65Aprotein phosphatase 2 regulatory subunit A, alpha19q13.41CV:GWASdb
CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
342945ZSCAN22HKR2 | ZNF50zinc finger and SCAN domain containing 2219q13.43CV:PGCnp
6195RPS6KA1HU-1 | MAPKAPK1A | RSK | RSK1 | p90Rskribosomal protein S6 kinase A11pCV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
26227PHGDH3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERAphosphoglycerate dehydrogenase1p12CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
963CD53MOX44 | TSPAN25CD53 molecule1p13CV:GWASdb
CV:PGCnp
GSMA_I
4853NOTCH2AGS2 | HJCYS | hN2notch 21p13-p11CV:PGCnp
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
4893NRASALPS4 | CMNS | N-ras | NCMS | NRAS1 | NS6neuroblastoma RAS viral (v-ras) oncogene homolog1p13.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
284611FAM102BSYM-3Bfamily with sequence similarity 102 member B1p13.3CV:PGCnp
DMG:Montano_2016
5906RAP1AC21KG | G-22K | KREV-1 | KREV1 | RAP1 | SMGP21RAP1A, member of RAS oncogene family1p13.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
29957SLC25A24APC1 | SCAMC-1solute carrier family 25 member 241p13.3CV:PGCnp
23443SLC35A3AMRSsolute carrier family 35 member A31p21CV:PGCnp
DMG:Wockner_2014
178AGLGDEamylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase1p21CV:PGCnp
DMG:Jaffe_2016
2135EXTL2EXTR2exostosin-like glycosyltransferase 21p21CV:PGCnp
148867SLC30A7ZNT7 | ZnT-7 | ZnTL2solute carrier family 30 member 71p21.2CV:PGCnp
CV:PheWAS
ION BALANCE
8915BCL10CARMEN | CIPER | CLAP | IMD37 | c-E10 | mE10B-cell CLL/lymphoma 101p22CV:PGCnp
GO_Annotation
388650FAM69A-family with sequence similarity 69 member A1p22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
55144LRRC8DLRRC5leucine-rich repeat containing 8 family member D1p22.2CV:PGCnp
34ACADMACAD1 | MCAD | MCADHacyl-CoA dehydrogenase, C-4 to C-12 straight chain1p31CV:PGCnp
GSMA_IIA
26135SERBP1CGI-55 | CHD3IP | HABP4L | PAI-RBP1 | PAIRBP1SERPINE1 mRNA binding protein 11p31CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
26009ZZZ3ATAC1zinc finger ZZ-type containing 31p31.1CV:PGCnp
GSMA_IIA
55631LRRC40dJ677H15.1leucine rich repeat containing 401p31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
55970GNG12-G protein subunit gamma 121p31.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
54741LEPROTLEPR | OB-RGRP | OBRGRP | VPS55leptin receptor overlapping transcript1p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
5538PPT1CLN1 | INCL | PPTpalmitoyl-protein thioesterase 11p32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
6342SCP2NLTP | NSL-TP | SCP-2 | SCP-CHI | SCP-X | SCPXsterol carrier protein 21p32CV:PGCnp
DMG:Wockner_2014
4116MAGOHMAGOH1 | MAGOHAmago homolog, exon junction complex core component1p32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
54987C1orf123-chromosome 1 open reading frame 1231p32.3CV:PGCnp
DMG:Jaffe_2016
26292MYCBPAMY-1MYC binding protein1p33-p32.2DMG:Nishioka_2013
7805LAPTM5CLAST6lysosomal protein transmembrane 51p34CV:PGCnp
3633INPP5B5PTaseinositol polyphosphate-5-phosphatase B1p34CV:PGCnp
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
3065HDAC1GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 11p34CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
64834ELOVL1CGI-88 | Ssc1ELOVL fatty acid elongase 11p34.2CV:PGCnp
4725NDUFS5CI-15k | CI15KNADH:ubiquinone oxidoreductase subunit S51p34.2-p33CV:GWASdb
CV:PGCnp
10946SF3A3PRP9 | PRPF9 | SAP61 | SF3a60splicing factor 3a subunit 31p34.3CV:PGCnp
79647AKIRIN1C1orf108 | STRF2akirin 11p34.3CV:GWASdb
CV:PGCnp
9967THRAP3TRAP150thyroid hormone receptor associated protein 31p34.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
79830ZMYM1MYMzinc finger MYM-type containing 11p34.3CV:PGCnp
DMG:vanEijk_2014
6118RPA2REPA2 | RP-A p32 | RP-A p34 | RPA32replication protein A21p35CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
51441YTHDF2CAHL | HGRG8 | NY-REN-2YTH N(6)-methyladenosine RNA binding protein 21p35CV:PGCnp
1441CSF3RCD114 | GCSFRcolony stimulating factor 3 receptor1p35-p34.3CV:PGCnp
DNM:Gulsuner_2013
200081TXLNAIL14 | TXLNtaxilin alpha1p35.1CV:PGCnp
DMG:vanEijk_2014
9410SNRNP4040K | HPRP8BP | PRP8BP | PRPF8BP | SPF38 | WDR57small nuclear ribonucleoprotein U5 subunit 401p35.2CV:PGCnp
DMG:Wockner_2014
10691GMEB1P96PIF | PIF96glucocorticoid modulatory element binding protein 11p35.3CV:PGCnp
5511PPP1R8ARD-1 | ARD1 | NIPP-1 | NIPP1 | PRO2047protein phosphatase 1 regulatory subunit 81p35.3CV:PGCnp
DMG:Wockner_2014
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
23400ATP13A2CLN12 | HSA9947 | KRPPD | PARK9ATPase 13A21p36CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
11332ACOT7ACH1 | ACT | BACH | CTE-II | LACH | LACH1 | hBACHacyl-CoA thioesterase 71p36CV:PGCnp
DMG:Jaffe_2016
11079RER1-retention in endoplasmic reticulum sorting receptor 11p36CV:PGCnp
1870E2F2E2F-2E2F transcription factor 21p36CV:GWASdb
DMG:Wockner_2014
998CDC42CDC42Hs | G25K | TKScell division cycle 421p36.1CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
832CAPZBCAPB | CAPPB | CAPZcapping actin protein of muscle Z-line beta subunit1p36.1CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
6924TCEB3EloA | SIII | SIII p110 | TCEB3Atranscription elongation factor B subunit 31p36.1CV:PGCnp
DMG:Jaffe_2016
55629PNRC2-proline rich nuclear receptor coactivator 21p36.11DMG:Wockner_2014
26119LDLRAP1ARH | ARH1 | ARH2 | FHCB1 | FHCB2low density lipoprotein receptor adaptor protein 11p36.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
84243ZDHHC18DHHC-18 | DHHC18zinc finger DHHC-type containing 181p36.11CV:PGCnp
55721IQCC-IQ motif containing C1p36.11-p34.2CV:GWASdb
DMG:Nishioka_2013
DMG:Wockner_2014
50809HP1BP3HP1-BP74 | HP1BP74heterochromatin protein 1 binding protein 31p36.12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
84196USP48RAP1GA1 | USP31ubiquitin specific peptidase 481p36.12CV:PGCnp
10236HNRNPRHNRPR | hnRNP-Rheterogeneous nuclear ribonucleoprotein R1p36.12CV:PGCnp
DMG:Jaffe_2016
8672EIF4G3eIF-4G 3 | eIF4G 3 | eIF4GIIeukaryotic translation initiation factor 4 gamma 31p36.12CV:GWAScat
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
55707NECAP2-NECAP endocytosis associated 21p36.13CV:PGCnp
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2475MTORFRAP | FRAP1 | FRAP2 | RAFT1 | RAPT1 | SKSmechanistic target of rapamycin1p36.2CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
79180EFHD2SWS1EF-hand domain family member D21p36.21CV:PGCnp
PMID:cooccur
CompositeSet
90231KIAA2013-KIAA20131p36.22CV:PGCnp
5226PGD6PGDphosphogluconate dehydrogenase1p36.22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
199953TMEM201NET5transmembrane protein 2011p36.22CV:PGCnp
DNM:Fromer_2014
CompositeSet
473REREARG | ARP | ATN1L | DNB1arginine-glutamic acid dipeptide (RE) repeats1p36.23CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:PheWAS
DMG:vanEijk_2014
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
8514KCNAB2AKR6A5 | HKvbeta2 | HKvbeta2.1 | HKvbeta2.2 | KCNA2B | KV-BETA-2potassium voltage-gated channel subfamily A regulatory beta subunit 21p36.3CV:PGCnp
DMG:Wockner_2014
EXCITABILITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
79707NOL9Grc3 | NET6nucleolar protein 91p36.31CV:PGCnp
PMID:cooccur
51150SDF4Cab45 | SDF-4stromal cell derived factor 41p36.33CV:PGCnp
DNM:Girard_2011
Expression
CompositeSet
65220NADKdJ283E3.1NAD kinase1p36.33CV:PGCnp
DMG:Wockner_2014
4209MEF2D-myocyte enhancer factor 2D1q12-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
10401PIAS3ZMIZ5protein inhibitor of activated STAT 31q21CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
3570IL6RCD126 | IL-6R-1 | IL-6RA | IL6Q | IL6RA | IL6RQ | gp80interleukin 6 receptor1q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
6281S100A1042C | ANX2L | ANX2LG | CAL1L | CLP11 | Ca[1] | GP11 | P11 | p10S100 calcium binding protein A101q21CV:PGCnp
DEG:Sanders_2013
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
6282S100A11HEL-S-43 | MLN70 | S100CS100 calcium binding protein A111q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
607BCL9LGSB-cell CLL/lymphoma 91q21CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
8407TAGLN2HA1756transgelin 21q21-q25CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
Network
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
9129PRPF3HPRP3 | HPRP3P | PRP3 | Prp3p | RP18 | SNRNP90pre-mRNA processing factor 31q21.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
Ascano FMRP targets
27246RNF115BCA2 | ZNF364ring finger protein 1151q21.1CNV:YES
CV:PGCnp
9554SEC22BERS-24 | SEC22L1SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)1q21.1CNV:YES
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9939RBM8ABOV-1A | BOV-1B | BOV-1C | C1DELq21.1 | DEL1q21.1 | MDS014 | RBM8 | RBM8B | TAR | Y14 | ZNRP | ZRNP1RNA binding motif protein 8A1q21.1CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
79630C1orf54-chromosome 1 open reading frame 541q21.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
1163CKS1BCKS1 | PNAS-16 | PNAS-18 | ckshs1CDC28 protein kinase regulatory subunit 1B1q21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
7170TPM3CAPM1 | CFTD | HEL-189 | HEL-S-82p | NEM1 | OK/SW-cl.5 | TM-5 | TM3 | TM30 | TM30nm | TM5 | TPMsk3 | TRK | hscp30tropomyosin 31q21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23126POGZMRD37 | WHSUS | ZNF280E | ZNF635 | ZNF635mpogo transposable element with ZNF domain1q21.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
CompositeSet
2029ENSAARPP-19eendosulfine alpha1q21.3CV:PGCnp
DEG:Zhao_2015
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
23557SNAPINBLOC1S7 | BLOS7 | BORCS3 | SNAPAPSNAP associated protein1q21.3GO_Annotation
GSMA_IIA
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
23248RPRD2HSPC099 | KIAA0460regulation of nuclear pre-mRNA domain containing 21q21.3CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
962CD48BCM1 | BLAST | BLAST1 | MEM-102 | SLAMF2 | hCD48 | mCD48CD48 molecule1q21.3-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
64218SEMA4ACORD10 | RP35 | SEMAB | SEMBsemaphorin 4A1q22CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
54865GPATCH4GPATC4G-patch domain containing 41q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
2153F5FVL | PCCF | RPRGL1 | THPH2coagulation factor V1q23CV:PGCnp
PMID:cooccur
2212FCGR2ACD32 | CD32A | CDw32 | FCG2 | FCGR2 | FCGR2A1 | FcGR | IGFR2Fc fragment of IgG receptor IIa1q23CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIA
261726TIPRLTIP | TIP41TOR signaling pathway regulator1q23.2CV:PGCnp
DMG:Jaffe_2016
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
481ATP1B1ATP1BATPase Na+/K+ transporting subunit beta 11q24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8674VAMP4VAMP-4 | VAMP24vesicle associated membrane protein 41q24-q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
EXOCYTOSIS
54499TMCO1HP10122 | PCIA3 | PNAS-136 | TMCC4transmembrane and coiled-coil domains 11q24.1CV:PGCnp
PMID:cooccur
26092TOR1AIP1LAP1 | LAP1Btorsin 1A interacting protein 11q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
6646SOAT1ACACT | ACAT | ACAT-1 | ACAT1 | SOAT | STATsterol O-acyltransferase 11q25CV:PGCnp
DNM:Fromer_2014
CompositeSet
81563C1orf21PIG13chromosome 1 open reading frame 211q25CV:PGCnp
DMG:Jaffe_2016
116496FAM129AC1orf24 | GIG39 | NIBANfamily with sequence similarity 129 member A1q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9887SMG7C1orf16 | EST1C | SGA56MSMG7 nonsense mediated mRNA decay factor1q25CV:PGCnp
DMG:Jaffe_2016
9917FAM20Bgxk1family with sequence similarity 20 member B1q25CV:PGCnp
DMG:Jaffe_2016
9213XPR1IBGC6 | SYG1 | X3xenotropic and polytropic retrovirus receptor 11q25.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
10228STX6-syntaxin 61q25.3CV:PGCnp
CV:PheWAS
DEG:Sanders_2013
INTRACELLULAR TRAFFICKING
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
5321PLA2G4APLA2G4 | cPLA2 | cPLA2-alphaphospholipase A2 group IVA1q31.1Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
140609NEK7-NIMA related kinase 71q31.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
947CD34-CD34 molecule1q32CV:GWASdb
CV:PGCnp
PMID:cooccur
2005ELK4SAP1ELK4, ETS transcription factor1q32CV:PGCnp
DMG:Wockner_2014
51377UCHL5CGI-70 | INO80R | UCH-L5 | UCH37ubiquitin C-terminal hydrolase L51q32CV:PGCnp
DMG:Jaffe_2016
23380SRGAP2ARHGAP34 | FNBP2 | SRGAP2A | SRGAP3SLIT-ROBO Rho GTPase activating protein 21q32.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
55705IPO9Imp9importin 91q32.1CV:PGCnp
DMG:Jaffe_2016
5877RABIFMSS4 | RASGFR3 | RASGRF3RAB interacting factor1q32.1DMG:Jaffe_2016INTRACELLULAR TRAFFICKING
1116CHI3L1ASRT7 | CGP-39 | GP-39 | GP39 | HC-gp39 | HCGP-3P | YKL-40 | YKL40 | YYL-40 | hCGP-39chitinase 3 like 11q32.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
PMID:cooccur
83593RASSF5Maxp1 | NORE1 | NORE1A | NORE1B | RAPL | RASSF3Ras association domain family member 51q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
5525PPP2R5AB56A | PR61Aprotein phosphatase 2 regulatory subunit B', alpha1q32.2-q32.3CV:PGCnp
DMG:Wockner_2014
56950SMYD2HSKM-B | KMT3C | ZMYND14SET and MYND domain containing 21q32.3CV:GWASdb
CV:PGCnp
64853AIDAC1orf80axin interactor, dorsalization associated1q41CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
PMID:cooccur
2590GALNT2GalNAc-T2polypeptide N-acetylgalactosaminyltransferase 21q41-q42CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
142PARP1ADPRT | ADPRT 1 | ADPRT1 | ARTD1 | PARP | PARP-1 | PPOL | pADPRT-1poly(ADP-ribose) polymerase 11q41-q42CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
7257TSNAXTRAXtranslin-associated factor X1q42.1Association
DNM:Fromer_2014
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
2271FHFMRD | HLRCC | LRCC | MCL | MCUL1fumarate hydratase1q42.1CV:PGCnp
PMID:cooccur
9725TMEM63AKIAA0792transmembrane protein 63A1q42.12CV:PGCnp
DMG:Wockner_2014
Expression
64746ACBD3GCP60 | GOCAP1 | GOLPH1 | PAP7acyl-CoA binding domain containing 31q42.12CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
81559TRIM11BIA1 | RNF92tripartite motif containing 111q42.13CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
128061C1orf131-chromosome 1 open reading frame 1311q42.2CV:PGCnp
DMG:Jaffe_2016
359948IRF2BP2-interferon regulatory factor 2 binding protein 21q42.3CV:PGCnp
DMG:Wockner_2014
64216TFB2MHkp1 | mtTFB2transcription factor B2, mitochondrial1q44CV:PGCnp
DMG:Jaffe_2016
3192HNRNPUHNRNPU-AS1 | HNRPU | SAF-A | SAFA | U21.1 | hnRNP Uheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)1q44DMG:Jaffe_2016
159ADSSADEH | ADSS 2adenylosuccinate synthase1q44CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
22803XRN2-5'-3' exoribonuclease 220p11.2-p11.1CV:PGCnp
Network
PMID:cooccur
1471CST3ARMD11 | HEL-S-2cystatin C20p11.21Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
57325CSRP2BPATAC2 | CRP2BP | KAT14 | PRO1194 | dJ717M23.1CSRP2 binding protein20p11.23CV:PGCnp
DEG:Sanders_2013
GSMA_I
51126NAA20NAT3 | NAT3P | NAT5 | NAT5P | dJ1002M8.1N(alpha)-acetyltransferase 20, NatB catalytic subunit20p11.23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6629SNRPB2Msl1small nuclear ribonucleoprotein polypeptide B20p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
2280FKBP1AFKBP-12 | FKBP-1A | FKBP1 | FKBP12 | PKC12 | PKCI2 | PPIASEFK506 binding protein 1A20p13NetworkRNA AND PROTEIN SYNTHESIS
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
6628SNRPBCCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-Bsmall nuclear ribonucleoprotein polypeptides B and B120p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
25939SAMHD1CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88SAM domain and HD domain 120pter-q12CV:PGCnp
DMG:Jaffe_2016
171023ASXL1BOPS | MDSadditional sex combs like 1, transcriptional regulator20q11CV:PGCnp
DNM:Fromer_2014
CompositeSet
Chromatin Remodeling Genes
23054NCOA6AIB3 | ASC2 | NRC | PRIP | RAP250 | TRBPnuclear receptor coactivator 620q11CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
22919MAPRE1EB1microtubule associated protein RP/EB family member 120q11.1-q11.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
5933RBL1CP107 | PRB1 | p107retinoblastoma-like 120q11.2CV:PGCnp
DMG:Jaffe_2016
6789STK4KRS2 | MST1 | TIIAC | YSK3serine/threonine kinase 420q11.2-q13.2CV:GWASdb
CV:PGCnp
83737ITCHADMFD | AIF4 | AIP4 | NAPP1itchy E3 ubiquitin protein ligase20q11.22CV:PGCnp
PMID:cooccur
3929LBPBPIFD2lipopolysaccharide binding protein20q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
6431SRSF6B52 | HEL-S-91 | SFRS6 | SRP55serine/arginine-rich splicing factor 620q12-q13.1CV:PGCnp
Expression
1434CSE1LCAS | CSE1 | XPO2CSE1 chromosome segregation 1-like (yeast)20q13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
7529YWHABGW128 | HEL-S-1 | HS1 | KCIP-1 | YWHAAtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta20q13.1CV:PGCnp
DMG:Wockner_2014
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
128486FITM2C20orf142 | Fit2 | dJ881L22.2fat storage-inducing transmembrane protein 220q13.12CV:PGCnp
DMG:Jaffe_2016
Expression
23613ZMYND8PRKCBP1 | PRO2893 | RACK7zinc finger MYND-type containing 820q13.12CV:PGCnp
Network
51604PIGTCGI-06 | MCAHS3 | NDAP | PNH2phosphatidylinositol glycan anchor biosynthesis class T20q13.12CV:PGCnp
DMG:Jaffe_2016
55959SULF2HSULF-2sulfatase 220q13.12CV:PGCnp
DNM:Fromer_2014
CompositeSet
57580PREX1P-REX1phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 120q13.13CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
7335UBE2V1CIR1 | CROC-1 | CROC1 | UBE2V | UEV-1 | UEV1 | UEV1Aubiquitin conjugating enzyme E2 V120q13.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
10139ARFRP1ARL18 | ARP | Arp1ADP ribosylation factor related protein 120q13.3CV:PGCnp
DMG:Wockner_2014
8675STX16SYN16syntaxin 1620q13.32CV:PGCnp
GO_Annotation
INTRACELLULAR TRAFFICKING
1522CTSZCTSXcathepsin Z20q13.32CV:PGCnp
DMG:vanEijk_2014
26205GMEB2GMEB-2 | P79PIF | PIF79glucocorticoid modulatory element binding protein 220q13.33CV:PGCnpAscano FMRP targets
6874TAF4TAF2C | TAF2C1 | TAF4A | TAFII130 | TAFII135TATA-box binding protein associated factor 420q13.33CV:PGCnp
54149C21orf91C21orf14 | C21orf38 | CSSG1 | EURL | YG81chromosome 21 open reading frame 9121q21.1CV:PGCnp
6651SONBASS1 | C21orf50 | DBP-5 | NREBP | SON3SON DNA binding protein21q22.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
3455IFNAR2IFN-R | IFN-alpha-REC | IFNABR | IFNARB | IMD45interferon alpha and beta receptor subunit 221q22.11CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
26046LTN1C21orf10 | C21orf98 | RNF160 | ZNF294listerin E3 ubiquitin protein ligase 121q22.11CV:GWASdb
CV:PGCnp
10069RWDD2BC21orf6 | GL011RWD domain containing 2B21q22.11CV:PGCnp
DMG:Wockner_2014
10694CCT8C21orf112 | Cctq | D21S246 | PRED71chaperonin containing TCP1 subunit 821q22.11CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2618GARTAIRS | GARS | GARTF | PAIS | PGFT | PRGSphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase21q22.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
757TMEM50BC21orf4 | HCVP7TP3transmembrane protein 50B21q22.11CV:PGCnp
DMG:vanEijk_2014
7074TIAM1-T-cell lymphoma invasion and metastasis 121q22.11CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
54069MIS18AB28 | C21orf45 | C21orf46 | FASP1 | MIS18alpha | hMis18alphaMIS18 kinetochore protein A21q22.11CV:PGCnp
DMG:Jaffe_2016
571BACH1BACH-1 | BTBD24BTB and CNC homology 1, basic leucine zipper transcription factor 121q22.11CV:PGCnp
DMG:Jaffe_2016
23515MORC3NXP2 | ZCW5 | ZCWCC3MORC family CW-type zinc finger 321q22.13CV:PGCnp
3150HMGN1HMG14high mobility group nucleosome binding domain 121q22.2CV:PGCnp
8867SYNJ1INPP5G | PARK20synaptojanin 121q22.2CV:PGCnp
GO_Annotation
Network
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
7327UBE2G2UBC7ubiquitin conjugating enzyme E2 G221q22.3CV:PGCnp
8888MCM3APGANP | MAP80 | SAC3minichromosome maintenance complex component 3 associated protein21q22.3CV:PGCnp
7109TRAPPC10EHOC-1 | EHOC1 | GT334 | TMEM1 | TRS130 | TRS30trafficking protein particle complex 1021q22.3DMG:Wockner_2014CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8624PSMG1C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1proteasome (prosome, macropain) assembly chaperone 121q22.3CV:PGCnp
3689ITGB2CD18 | LAD | LCAMB | LFA-1 | MAC-1 | MF17 | MFI7integrin subunit beta 221q22.3CV:PGCnp
DMG:vanEijk_2014
Network
6612SUMO3SMT3A | SMT3H1 | SUMO-3 | Smt3Bsmall ubiquitin-like modifier 321q22.3DEG:Zhao_2015
56478EIF4ENIF14E-T | Clast4eukaryotic translation initiation factor 4E nuclear import factor 122q11.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
PMID:cooccur
CompositeSet
27443CECR2-cat eye syndrome chromosome region, candidate 222q11.2CV:GWASdb
CV:PGCnp
GSMA_I
150223YDJC-YdjC homolog (bacterial)22q11.21DMG:Jaffe_2016
5594MAPK1ERK | ERK-2 | ERK2 | ERT1 | MAPK2 | P42MAPK | PRKM1 | PRKM2 | p38 | p40 | p41 | p41mapk | p42-MAPKmitogen-activated protein kinase 122q11.21CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
27037TRMT2AHTF9CtRNA methyltransferase 2 homolog A22q11.21Association
CNV:YES
CV:PGCnp
GR_WM
9647PPM1FCAMKP | CaMKPase | FEM-2 | POPX2 | hFEM-2protein phosphatase, Mg2+/Mn2+ dependent 1F22q11.22CV:GWASdb
CV:PGCnp
GSMA_I
613BCRALL | BCR1 | CML | D22S11 | D22S662 | PHLbreakpoint cluster region22q11.23CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23760PITPNBPI-TP-beta | PtdInsTP | VIB1Bphosphatidylinositol transfer protein beta22q12.1CV:PGCnp
Expression
GSMA_I
150275CCDC117dJ366L4.1coiled-coil domain containing 11722q12.1CV:PGCnp
GSMA_I
157ADRBK2BARK2 | GRK3adrenergic, beta, receptor kinase 222q12.1CV:PGCnp
GSMA_I
PMID:cooccur
7494XBP1TREB-5 | TREB5 | XBP-1 | XBP2X-box binding protein 122q12.1|22q12Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
55000TUG1LINC00080 | NCRNA00080 | TI-227Htaurine up-regulated 1 (non-protein coding)22q12.2CV:PGCnp
2130EWSR1EWS | EWS-FLI1 | bK984G1.4EWS RNA binding protein 122q12.2CV:PGCnp
GSMA_I
Network
23598PATZ1MAZR | PATZ | RIAZ | ZBTB19 | ZNF278 | ZSG | dJ400N23POZ/BTB and AT hook containing zinc finger 122q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
29775CARD10BIMP1 | CARMA3caspase recruitment domain family member 1022q13.1CV:PGCnp
DMG:Montano_2016
11020IFT27BBS19 | RABL4 | RAYLintraflagellar transport 2722q13.1CV:GWASdb
CV:PGCnp
1439CSF2RBCD131 | CDw131 | IL3RB | IL5RB | SMDP5colony stimulating factor 2 receptor beta common subunit22q13.1Association
CV:GWASdb
CV:PGCnp
GR_Ng
GR_WM
Network
PMID:cooccur
9582APOBEC3BA3B | APOBEC1L | ARCD3 | ARP4 | DJ742C19.2 | PHRBNL | bK150C2.2apolipoprotein B mRNA editing enzyme catalytic subunit 3B22q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6767ST13AAG2 | FAM10A1 | FAM10A4 | HIP | HOP | HSPABP | HSPABP1 | P48 | PRO0786 | SNC6suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)22q13.2CV:PGCnp
PMID:cooccur
10766TOB2TOB4 | TOBL | TROB2transducer of ERBB2, 222q13.2CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
706TSPOBPBS | BZRP | DBI | IBP | MBR | PBR | PBS | PKBS | PTBR | mDRC | pk18translocator protein22q13.31ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
64098PARVG-parvin gamma22q13.31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
83746L3MBTL2H-l(3)mbt-l | L3MBTl(3)mbt-like 2 (Drosophila)22q13.31-q13.33CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
23774BRD1BRL | BRPF1 | BRPF2bromodomain containing 122q13.33Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
9801MRPL19L19mt | MRP-L15 | MRP-L19 | MRPL15 | RLX1 | RPML15mitochondrial ribosomal protein L192p11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
388969C2orf68HCRCN81chromosome 2 open reading frame 682p11.2CV:PGCnp
DEG:Zhao_2015
10713USP3965K | CGI-21 | HSPC332 | SAD1 | SNRNP65ubiquitin specific peptidase 392p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
822CAPGAFCP | HEL-S-66 | MCPcapping actin protein, gelsolin like2p11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
22934RPIARPI | RPIADribose 5-phosphate isomerase A2p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9451EIF2AK3PEK | PERK | WRSeukaryotic translation initiation factor 2 alpha kinase 32p12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
26505CNNM3ACDP3cyclin and CBS domain divalent metal cation transport mediator 32p12-p11.2CV:PGCnp
DEG:Zhao_2015
DNM:Fromer_2014
GSMA_I
CompositeSet
8446DUSP11PIR1dual specificity phosphatase 112p13.1CV:PGCnp
64395GMCL1BTBD13 | GCL | GCL1 | SPATA29germ cell-less, spermatogenesis associated 12p13.3CV:PGCnp
4190MDH1HEL-S-32 | MDH-s | MDHA | MGC:1375 | MOR2malate dehydrogenase 12p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CELL METABOLISM
CompositeSet
9792SERTAD2Sei-2 | TRIP-Br2SERTA domain containing 22p14CV:PGCnp
DMG:Jaffe_2016
10097ACTR2ARP2ARP2 actin-related protein 2 homolog (yeast)2p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7360UGP2UDPG | UDPGP | UDPGP2 | UGP1 | UGPP1 | UGPP2 | pHC379UDP-glucose pyrophosphorylase 22p14-p13CV:PGCnp
DMG:Jaffe_2016
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
4528MTIF2-mitochondrial translational initiation factor 22p16.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
53335BCL11ABCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856B-cell CLL/lymphoma 11A2p16.1CV:GWASdb
CV:PGCnp
PMID:cooccur
7444VRK2-vaccinia related kinase 22p16.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
129285PPP1R21CCDC128 | KLRAQ1protein phosphatase 1 regulatory subunit 212p16.3CV:GWAScat
CV:GWASdb
CV:PGCnp
80204FBXO11FBX11 | PRMT9 | UBR6 | UG063H01 | VIT1F-box protein 112p16.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
23683PRKD3EPK2 | PKC-NU | PKD3 | PRKCN | nPKC-NUprotein kinase D32p21CV:PGCnp
LK:YES
PMID:cooccur
6711SPTBN1ELF | HEL102 | SPTB2 | betaSpIIspectrin beta, non-erythrocytic 12p21CV:GWASdb
CV:PGCnp
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
805CALM2CAMII | LQT15 | PHKD | PHKD2 | caMcalmodulin 2 (phosphorylase kinase, delta)2p21CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
10602CDC42EP3BORG2 | CEP3 | UB1CDC42 effector protein 32p21CV:GWASdb
CV:PGCnp
PMID:cooccur
5281PIGF-phosphatidylinositol glycan anchor biosynthesis class F2p21-p16CV:PGCnp
PMID:cooccur
3344FOXN2HTLFforkhead box N22p22-p16CV:GWAScat
CV:GWASdb
CV:PGCnp
790CADCDG1Zcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase2p22-p21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
6432SRSF79G8 | AAG3 | SFRS7serine/arginine-rich splicing factor 72p22.1CV:PGCnp
79833GEMIN6-gem nuclear organelle associated protein 62p22.1CV:PGCnp
DMG:Nishioka_2013
6801STRNSG2NAstriatin2p22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
55622TTC27-tetratricopeptide repeat domain 272p22.3CV:GWASdb
CV:PGCnp
84272YIPF4FinGER4 | Nbla11189Yip1 domain family member 42p22.3CV:PGCnp
DEG:Zhao_2015
678ZFP36L2BRF2 | ERF-2 | ERF2 | RNF162C | TIS11DZFP36 ring finger protein-like 22p22.3-p21CV:PGCnp
DMG:Montano_2016
5500PPP1CBHEL-S-80p | PP-1B | PP1B | PP1beta | PPP1CDprotein phosphatase 1 catalytic subunit beta2p23CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
11321GPN1ATPBD1A | MBDIN | NTPBP | RPAP4 | XAB1GPN-loop GTPase 12p23.3CV:GWASdb
CV:PGCnp
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
57498KIDINS220ARMSkinase D-interacting substrate 220kDa2p24CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
28951TRIB2C5FW | GS3955 | TRB2tribbles pseudokinase 22p24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6868ADAM17ADAM18 | CD156B | CSVP | NISBD | NISBD1 | TACEADAM metallopeptidase domain 172p25CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
10130PDIA6ERP5 | P5 | TXNDC7protein disulfide isomerase family A member 62p25.1CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
55256ADI1APL1 | ARD | Fe-ARD | HMFT1638 | MTCBP1 | Ni-ARD | SIPL | mtnDacireductone dioxygenase 12p25.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
23397NCAPHBRRN1 | CAP-Hnon-SMC condensin I complex subunit H2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
11138TBC1D8AD3 | GRAMD8 | HBLP1 | TBC1D8A | VRPTBC1 domain family member 82q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
56910STARD7GTT1StAR related lipid transfer domain containing 72q11.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
8807IL18RAPACPL | CD218b | CDw218b | IL-18R-beta | IL-18RAcP | IL-18Rbeta | IL-1R-7 | IL-1R7 | IL-1RAcPL | IL18RBinterleukin 18 receptor accessory protein2q12Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
1622DBIACBD1 | ACBP | CCK-RP | EPdiazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)2q12-q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
64682ANAPC1APC1 | MCPR | TSG24anaphase promoting complex subunit 12q12.1CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
9392TGFBRAP1TRAP-1 | TRAP1 | VPS3transforming growth factor beta receptor associated protein 12q12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
150468CKAP2L-cytoskeleton associated protein 2 like2q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
5899RALB-v-ral simian leukemia viral oncogene homolog B2q14.2CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
Expression
GSMA_I
GSMA_IIA
23332CLASP1MAST1cytoplasmic linker associated protein 12q14.2-q14.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
92856IMP4BXDC4IMP4 homolog, U3 small nucleolar ribonucleoprotein2q21.1CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
130074FAM168BMANIfamily with sequence similarity 168 member B2q21.1CV:PGCnp
26469PTPN18BDP1 | PTP-HSCFprotein tyrosine phosphatase, non-receptor type 182q21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
1615DARSHBSL | aspRSaspartyl-tRNA synthetase2q21.3GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
55843ARHGAP15BM046Rho GTPase activating protein 152q22.2-q22.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
9839ZEB2HSPC082 | SIP-1 | SIP1 | SMADIP1 | ZFHX1Bzinc finger E-box binding homeobox 22q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
9111NMI-N-myc and STAT interactor2q23CV:PGCnp
GSMA_IIA
PMID:cooccur
26122EPC2EPC-LIKEenhancer of polycomb homolog 22q23.1CV:PGC128
CV:PGCnp
CV:PheWAS
GSMA_I
GSMA_IIA
51776ZAKAZK | MLK7 | MLT | MLTK | MRK | mlklak | pksterile alpha motif and leucine zipper containing kinase AZK2q24.2CV:PGCnp
5937RBMS1C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1RNA binding motif, single stranded interacting protein 12q24.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
10213PSMD14PAD1 | POH1 | RPN11proteasome 26S subunit, non-ATPase 142q24.2CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
253782CERS6CERS5 | LASS6ceramide synthase 62q24.3CV:PGCnp
GSMA_IIA
79809TTC21BATD4 | IFT139 | IFT139B | JBTS11 | NPHP12 | Nbla10696 | SRTD4 | THM1tetratricopeptide repeat domain 21B2q24.3CV:PGCnp
GSMA_IIA
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
83879CDCA7JPO1cell division cycle associated 72q31CV:PGCnp
DNM:Fromer_2014
CompositeSet
80856KIAA1715LNP | LNP1 | Ul | ulnalessKIAA17152q31CV:PGCnp
DMG:Jaffe_2016
Expression
Potential synaptic genes
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
5163PDK1-pyruvate dehydrogenase kinase 12q31.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1781DYNC1I2DIC74 | DNCI2 | IC2dynein cytoplasmic 1 intermediate chain 22q31.1CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
79828METTL8TIPmethyltransferase like 82q31.1CV:PGCnp
DMG:Jaffe_2016
8520HAT1KAT1histone acetyltransferase 12q31.2-q33.1CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
1386ATF2CRE-BP1 | CREB-2 | CREB2 | HB16 | TREB7activating transcription factor 22q32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10477UBE2E3UBCH9 | UbcM2ubiquitin conjugating enzyme E2 E32q32.1CV:PGCnp
DMG:Jaffe_2016
Network
54431DNAJC10ERdj5 | JPDI | MTHr | PDIA19DnaJ heat shock protein family (Hsp40) member C102q32.1CV:GWASdb
CV:PGCnp
6772STAT1CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91signal transducer and activator of transcription 12q32.2CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
54842MFSD6MMR2 | hMMR2major facilitator superfamily domain containing 62q32.2CV:PGCnp
9262STK17BDRAK2serine/threonine kinase 17b2q32.3CV:PGCnp
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
841CASP8ALPS2B | CAP4 | Casp-8 | FLICE | MACH | MCH5caspase 82q33-q34CV:GWASdb
CV:PGCnp
23451SF3B1Hsh155 | MDS | PRP10 | PRPF10 | SAP155 | SF3b155splicing factor 3b subunit 12q33.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
Ascano FMRP targets
25843MOB42C4D | CGI-95 | MOB1 | MOB3 | MOBKL3 | PHOCN | PREI3MOB family member 4, phocein2q33.1CV:PGCnp
Expression
91526ANKRD44PP6-ARS-Bankyrin repeat domain 442q33.1CV:GWASdb
CV:PGCnp
DNM:Guipponi_2014
54891INO80D-INO80 complex subunit D2q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3417IDH1HEL-216 | HEL-S-26 | IDCD | IDH | IDP | IDPC | PICDisocitrate dehydrogenase 1 (NADP+)2q33.3CV:PGCnp
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL METABOLISM
Chromatin Remodeling Genes
50485SMARCAL1HARP | HHARPSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
Chromatin Remodeling Genes
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
10056FARSBFARSLB | FRSB | HSPC173 | PheHB | PheRSphenylalanyl-tRNA synthetase beta subunit2q36.1CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
CompositeSet
65080MRPL44COXPD16 | L44MT | MRP-L44mitochondrial ribosomal protein L442q36.1DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
55619DOCK10DRIP2 | Nbla10300 | ZIZ3dedicator of cytokinesis 102q36.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
CompositeSet
51719CAB39CGI-66 | MO25calcium binding protein 392q37.1CV:PGCnp
DMG:Wockner_2014
9208LRRFIP1FLAP-1 | FLAP1 | FLIIAP1 | GCF-2 | GCF2 | HUFI-1 | TRIPleucine rich repeat (in FLII) interacting protein 12q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
51078THAP4CGI-36 | PP238THAP domain containing 42q37.3CV:PGCnp
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
23429RYBPAAP1 | APAP-1 | DEDAF | YEAF1RING1 and YY1 binding protein3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
151987PPP4R2PP4R2protein phosphatase 4 regulatory subunit 23p13CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
317649EIF4E3eIF-4E3 | eIF4E-3eukaryotic translation initiation factor 4E family member 33p14CV:PGCnp
GSMA_IIA
GSMA_IIE
9861PSMD6Rpn7 | S10 | SGA-113M | p42A | p44S10proteasome 26S subunit, non-ATPase 63p14.1CV:PGCnp
Network
80145THOC7NIF3L1BP1 | fSAP24 | hTREX30THO complex 73p14.1CV:PGCnp
DMG:Wockner_2014
27086FOXP112CC4 | HSPC215 | MFH | QRF1 | hFKH1Bforkhead box P13p14.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
54899PXKMONaKAPX domain containing serine/threonine kinase like3p14.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
11102RPP14HsHTD2 | P14ribonuclease P/MRP 14kDa subunit3p14.3CV:PGCnp
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
51099ABHD5CDS | CGI58 | IECN2 | NCIE2abhydrolase domain containing 53p21CV:PGCnp
DMG:Jaffe_2016
10201NME6IPIA-ALPHA | NDK 6 | NM23-H6NME/NM23 nucleoside diphosphate kinase 63p21CV:PGCnp
51517NCKIPSDAF3P21 | DIP | DIP1 | ORF1 | SPIN90 | VIP54 | WASLBP | WISHNCK interacting protein with SH3 domain3p21CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1230CCR1CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1C-C motif chemokine receptor 13p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
11344TWF2A6RP | A6r | MSTP011 | PTK9Ltwinfilin actin binding protein 23p21.1CV:PGCnp
DMG:Wockner_2014
LK:YES
375346TMEM110STIMATEtransmembrane protein 1103p21.1CV:PGCnp
LK:YES
55349CHDH-choline dehydrogenase3p21.1CV:PGCnp
DEG:Zhao_2015
55802DCP1AHSA275986 | Nbla00360 | SMAD4IP1 | SMIFdecapping mRNA 1A3p21.1CV:PGCnp
DMG:Jaffe_2016
Network
211ALAS1ALAS | ALAS-H | ALAS3 | ALASH | MIG45'-aminolevulinate synthase 13p21.1CV:PGCnp
DNM:Fromer_2014
LK:YES
CompositeSet
Ascano FMRP targets
132160PPM1MPP2C-eta | PP2CE | PP2Cetaprotein phosphatase, Mg2+/Mn2+ dependent 1M3p21.2CV:PGCnp
DMG:Wockner_2014
LK:YES
820CAMPCAP-18 | CAP18 | CRAMP | FALL-39 | FALL39 | HSD26 | LL37cathelicidin antimicrobial peptide3p21.3CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
7867MAPKAPK33PK | MAPKAP-K3 | MAPKAP3 | MAPKAPK-3 | MK-3mitogen-activated protein kinase-activated protein kinase 33p21.3CV:PGCnp
DMG:Jaffe_2016
8994LIMD1-LIM domains containing 13p21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
729230CCR2CC-CKR-2 | CCR-2 | CCR2A | CCR2B | CD192 | CKR2 | CKR2A | CKR2B | CMKBR2 | MCP-1-RC-C motif chemokine receptor 23p21.31CV:PGCnp
PMID:cooccur
55152DALRD3-DALR anticodon binding domain containing 33p21.31CV:PGCnp
9497SLC4A7NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6solute carrier family 4 member 73p22CV:PGCnp
GO_Annotation
GSMA_I
4615MYD88MYD88Dmyeloid differentiation primary response 883p22CV:PGCnp
GSMA_I
PMID:cooccur
112616CMTM7CKLFSF7CKLF like MARVEL transmembrane domain containing 73p22.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GSMA_I
201595STT3BCDG1X | SIMP | STT3-BSTT3B, catalytic subunit of the oligosaccharyltransferase complex3p23CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
8850KAT2BCAF | P/CAF | PCAFlysine acetyltransferase 2B3p24CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
55768NGLY1CDDG | CDG1V | PNG1 | PNGaseN-glycanase 13p24.2CV:PGCnp
Expression
GSMA_I
5868RAB5ARAB5RAB5A, member RAS oncogene family3p24.3CV:PGCnp
GSMA_I
Network
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
23228PLCL2PLCE2phospholipase C like 23p24.3CV:PGCnp
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
6533SLC6A6TAUTsolute carrier family 6 member 63p25.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_I
CELL METABOLISM
23225NUP210GP210 | POM210nucleoporin 210kDa3p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
CompositeSet
7862BRPF1BR140bromodomain and PHD finger containing 13p26-p25CV:PGCnp
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
3708ITPR1ACV | CLA4 | INSP3R1 | IP3R | IP3R1 | PPP1R94 | SCA15 | SCA16 | SCA29inositol 1,4,5-trisphosphate receptor type 13p26.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
63899NSUN3MST077 | MSTP077NOP2/Sun RNA methyltransferase family member 33q11.1CV:PGCnp
GSMA_IIA
GSMA_IIE
84864MINAMDIG | MINA53 | NO52 | ROXMYC induced nuclear antigen3q11.2CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
131544CRYBG3DKFZp667G2110 | vlAKAPcrystallin beta-gamma domain containing 33q11.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
CompositeSet
7372UMPSOPRTuridine monophosphate synthetase3q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
64422ATG3APG3 | APG3-LIKE | APG3L | PC3-96autophagy related 33q13.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
55032SLC35A5-solute carrier family 35 member A53q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
151888BTLABTLA1 | CD272B and T lymphocyte associated3q13.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
152185SPICE1CCDC52 | SPICEspindle and centriole associated protein 13q13.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
2932GSK3B-glycogen synthase kinase 3 beta3q13.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
116064LRRC58-leucine rich repeat containing 583q13.33CV:PGCnp
DMG:Jaffe_2016
7555CNBPCNBP1 | DM2 | PROMM | RNF163 | ZCCHC22 | ZNF9CCHC-type zinc finger, nucleic acid binding protein3q21CV:PGCnp
Network
8607RUVBL1ECP-54 | ECP54 | INO80H | NMP 238 | NMP238 | PONTIN | Pontin52 | RVB1 | TIH1 | TIP49 | TIP49ARuvB like AAA ATPase 13q21CV:PGCnp
4690NCK1NCK | NCKalpha | nck-1NCK adaptor protein 13q21CV:PGCnp
GO_Annotation
Network
151636DTX3LBBAPdeltex 3 like, E3 ubiquitin ligase3q21.1CV:PGCnp
DMG:Wockner_2014
56667MUC13DRCC1 | MUC-13mucin 13, cell surface associated3q21.2CV:PGCnp
2624GATA2DCML | IMD21 | MONOMAC | NFE1BGATA binding protein 23q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
PMID:cooccur
6184RPN1OST1 | RBPH1ribophorin I3q21.3CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5922RASA2GAP1MRAS p21 protein activator 23q22-q23CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9616RNF7CKBBP1 | ROC2 | SAGring finger protein 73q22-q24CV:PGCnp
PMID:cooccur
51163DBR1-debranching RNA lariats 13q22.3CV:PGCnp
DMG:Montano_2016
10274STAG1SA1 | SCC3Astromal antigen 13q22.3CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Xu_2012
CompositeSet
55167MSL2MSL-2 | MSL2L1 | RNF184male-specific lethal 2 homolog (Drosophila)3q22.3CV:PGCnp
483ATP1B3ATPB-3 | CD298ATPase Na+/K+ transporting subunit beta 33q23CV:PGCnp
DMG:Wockner_2014
9276COPB2beta'-COPcoatomer protein complex subunit beta 2 (beta prime)3q23CV:GWASdb
DMG:Jaffe_2016
Network
1359CPA3MC-CPAcarboxypeptidase A33q24CV:PGCnp
51714SELT-selenoprotein T3q25.1CV:PGCnp
DMG:Wockner_2014
3840KPNA4IPOA3 | QIP1 | SRP3karyopherin subunit alpha 43q25.33CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6498SKILSNO | SnoA | SnoI | SnoNSKI-like proto-oncogene3q26CV:PGCnp
Network
PMID:cooccur
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
6434TRA2BHtra2-beta | PPP1R156 | SFRS10 | SRFS10 | TRA2-BETA | TRAN2Btransformer 2 beta homolog (Drosophila)3q26.2-q27CV:PGCnp
79718TBL1XR1C21 | DC42 | IRA1 | TBLR1transducin (beta)-like 1 X-linked receptor 13q26.32CV:GWASdb
CV:PGCnp
23200ATP11BATPIF | ATPIRATPase phospholipid transporting 11B (putative)3q27CV:PGCnp
DMG:Jaffe_2016
55486PARLPRO2207 | PSARL | PSARL1 | PSENIP2 | RHBDS1presenilin associated, rhomboid-like3q27.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5437POLR2HRPABC3 | RPB17 | RPB8polymerase (RNA) II subunit H3q28DMG:Jaffe_2016
152137CCDC50C3orf6 | DFNA44 | YMERcoiled-coil domain containing 503q28CV:PGCnp
5504PPP1R2IPP-2 | IPP2protein phosphatase 1 regulatory inhibitor subunit 23q29CV:PGCnp
PMID:cooccur
84984CEP19C3orf34 | MOSPGFcentrosomal protein 19kDa3q29CNV:YES
CV:PGCnp
Expression
23527ACAP2CENTB2 | CNT-B2ArfGAP with coiled-coil, ankyrin repeat and PH domains 23q29CV:PGCnp
DMG:Jaffe_2016
5062PAK2PAK65 | PAKgammap21 protein (Cdc42/Rac)-activated kinase 23q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
200933FBXO45Fbx45F-box protein 453q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
57606SLAIN2KIAA1458SLAIN motif family member 24p11CV:PGCnp
54951COMMD8-COMM domain containing 84p12CV:PGCnp
DMG:Wockner_2014
51088KLHL5-kelch like family member 54p14CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
7358UGDHGDH | UDP-GlcDH | UDPGDH | UGDUDP-glucose 6-dehydrogenase4p15.1DMG:Wockner_2014
PMID:cooccur
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
57620STIM2-stromal interaction molecule 24p15.2CV:GWAScat
CV:PGCnp
29945ANAPC4APC4anaphase promoting complex subunit 44p15.2CV:PGCnp
5860QDPRDHPR | PKU2 | SDR33C1quinoid dihydropteridine reductase4p15.31CV:GWASdb
CV:PGCnp
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
51056LAP3HEL-S-106 | LAP | LAPEP | PEPSleucine aminopeptidase 34p15.32CV:PGCnp
9364RAB28CORD18RAB28, member RAS oncogene family4p15.33CV:PGCnp
DMG:Nishioka_2013
9948WDR1AIP1 | HEL-S-52 | NORI-1WD repeat domain 14p16.1CV:GWASdb
CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
8602NOP14C4orf9 | NOL14 | RES4-25 | RES425 | UTP2NOP14 nucleolar protein4p16.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Ascano FMRP targets
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
84286TMEM175hTMEM175transmembrane protein 1754p16.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5471PPATATASE | GPAT | PRATphosphoribosyl pyrophosphate amidotransferase4q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
3815KITC-Kit | CD117 | PBT | SCFRKIT proto-oncogene receptor tyrosine kinase4q12CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
55763EXOC1BM-102 | SEC3 | SEC3L1 | SEC3Pexocyst complex component 14q12CV:PGCnp
PMID:cooccur
EXOCYTOSIS
CompositeSet
26057ANKRD17GTAR | MASK2 | NY-BR-16ankyrin repeat domain 174q13.3CV:PGCnpCompositeSet
Darnell FMRP targets
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
4299AFF1AF4 | MLLT2 | PBM1AF4/FMR2 family member 14q21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
950SCARB2AMRF | CD36L2 | EPM4 | HLGP85 | LGP85 | LIMP-2 | LIMPII | SR-BIIscavenger receptor class B member 24q21.1CV:PGCnp
DMG:Wockner_2014
53371NUP54-nucleoporin 54kDa4q21.1DNM:Xu_2012CompositeSet
55752SEPT11-septin 114q21.1CV:GWASdb
CV:PGCnp
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
65008MRPL1BM022 | L1MT | MRP-L1mitochondrial ribosomal protein L14q21.1CV:PGCnp
DMG:Nishioka_2013
118429ANTXR2CMG-2 | CMG2 | HFS | ISH | JHFanthrax toxin receptor 24q21.21CV:GWAScat
CV:PGCnp
51316PLAC8C15 | DGIC | PNAS-144 | onzinplacenta specific 84q21.22CV:PGCnp
DMG:Jaffe_2016
22872SEC31AABP125 | ABP130 | HSPC275 | HSPC334 | SEC31L1SEC31 homolog A, COPII coat complex component4q21.22CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
DNM:McCarthy_2014
CompositeSet
10098TSPAN5NET-4 | NET4 | TM4SF9 | TSPAN-5tetraspanin 54q23CV:PGCnp
DMG:Jaffe_2016
128ADH5ADH-3 | ADHX | FALDH | FDH | GSH-FDH | GSNOR | HEL-S-60palcohol dehydrogenase 5 (class III), chi polypeptide4q23PMID:cooccur
23173METAP1MAP1A | MetAP1Amethionyl aminopeptidase 14q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4790NFKB1CVID12 | EBP-1 | KBF1 | NF-kB1 | NF-kappa-B | NF-kappaB | NFKB-p105 | NFKB-p50 | NFkappaB | p105 | p50nuclear factor of kappa light polypeptide gene enhancer in B-cells 14q24CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
4126MANBAMANB1mannosidase beta4q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
57117INTS12INT12 | PHF22 | SBBI22integrator complex subunit 124q24CV:PGCnp
7323UBE2D3E2(17)KB3 | UBC4/5 | UBCH5Cubiquitin conjugating enzyme E2 D34q24CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5530PPP3CACALN | CALNA | CALNA1 | CCN1 | CNA1 | PPP2Bprotein phosphatase 3 catalytic subunit alpha4q24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
54433GAR1NOLA1GAR1 ribonucleoprotein4q25DMG:Wockner_2014
27068PPA2HSPC124 | SID6-306pyrophosphatase (inorganic) 24q25CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
27071DAPP1BAM32dual adaptor of phosphotyrosine and 3-phosphoinositides4q25-q27CV:PGCnp
57721METTL14-methyltransferase like 144q26CV:PGCnp
DNM:Fromer_2014
CompositeSet
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
80854SETD7KMT7 | SET7 | SET7/9 | SET9SET domain containing lysine methyltransferase 74q28CV:PGCnpChromatin Remodeling Genes
166378SPATA5AFG2 | EHLMRS | SPAFspermatogenesis associated 54q28.1CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
CompositeSet
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
51809GALNT7GALNAC-T7 | GalNAcT7polypeptide N-acetylgalactosaminyltransferase 74q31.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
84068SLC10A7C4orf13 | P7solute carrier family 10 member 74q31.22CV:PGCnp
DMG:Jaffe_2016
57600FNIP2FNIPL | MAPO1folliculin interacting protein 24q32.1CV:PGCnp
1519CTSOCTSO1cathepsin O4q32.1CV:PGCnp
92345NAF1-nuclear assembly factor 1 ribonucleoprotein4q32.2CV:PGCnp
DMG:vanEijk_2014
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
8819SAP30-Sin3A associated protein 30kDa4q34.1CV:PGCnp
DEG:Maycox_2009
1635DCTD-dCMP deaminase4q35.1CV:GWASdb
CV:PGCnp
23530NNTGCCD4nicotinamide nucleotide transhydrogenase5p12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
23548TTC33OSRFtetratricopeptide repeat domain 335p13.1CV:GWASdb
CV:PGCnp
11044PAPD7LAK-1 | LAK1 | POLK | POLS | TRF4 | TRF4-1 | TRF41 | TUTASE5PAP associated domain containing 75p15CV:PGCnpAscano FMRP targets
54622ARL15ARFRP2ADP ribosylation factor like GTPase 155p15.2CV:GWASdb
CV:PGCnp
79888LPCAT1AGPAT10 | AGPAT9 | AYTL2 | PFAAP3 | lpcatlysophosphatidylcholine acyltransferase 15p15.33CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
133418EMBGP70embigin5q11.1CV:PGCnp
57688ZSWIM6AFNDzinc finger SWIM-type containing 65q12.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
5295PIK3R1AGM7 | GRB1 | IMD36 | p85 | p85-ALPHAphosphoinositide-3-kinase regulatory subunit 15q13.1CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
PMID:cooccur
6880TAF9MGC:5067 | STAF31/32 | TAF2G | TAFII-31 | TAFII-32 | TAFII31 | TAFII32 | TAFIID32TATA-box binding protein associated factor 95q13.2DNM:Fromer_2014CompositeSet
10087COL4A3BPCERT | CERTL | GPBP | MRD34 | STARD11collagen type IV alpha 3 binding protein5q13.3CV:PGCnp
10184LHFPL2-lipoma HMGIC fusion partner-like 25q14.1CV:PGCnp
DMG:Wockner_2014
6902TBCA-tubulin folding cofactor A5q14.1CV:PGCnp
DMG:Jaffe_2016
4208MEF2CC5DELq14.3 | DEL5q14.3myocyte enhancer factor 2C5q14.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
1070CETN3CDC31 | CEN3centrin 35q14.3CV:PGCnp
51752ERAP1A-LAP | ALAP | APPILS | ARTS-1 | ARTS1 | ERAAP | ERAAP1 | PILS-AP | PILSAPendoplasmic reticulum aminopeptidase 15q15CV:PGCnp
DMG:Jaffe_2016
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7903ST8SIA4PST | PST1 | SIAT8D | ST8SIA-IVST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 45q21CV:PGCnp
GO_Annotation
PMID:cooccur
9140ATG12APG12 | APG12L | FBR93 | HAPG12autophagy related 125q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
90355C5orf30-chromosome 5 open reading frame 305q21.1CV:GWASdb
CV:PGCnp
1456CSNK1G3CKI-gamma 3 | CSNK1G3Lcasein kinase 1 gamma 35q23CV:PGCnp
DMG:Nishioka_2013
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
6584SLC22A5CDSP | OCTN2solute carrier family 22 member 55q23.3CV:PGCnp
DEG:Zhao_2015
Expression
GSMA_I
10949HNRNPA0HNRPA0heterogeneous nuclear ribonucleoprotein A05q31CV:PGCnp
GSMA_I
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
6500SKP1EMC19 | OCP-II | OCP2 | SKP1A | TCEB1L | p19AS-phase kinase-associated protein 15q31DMG:Wockner_2014
Expression
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
7416VDAC1PORIN | VDAC-1voltage dependent anion channel 15q31CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_I
Network
PMID:cooccur
EXCITABILITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
10915TCERG1CA150 | TAF2S | Urn1transcription elongation regulator 15q31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
GSMA_IIE
7320UBE2BE2-17kDa | HHR6B | HR6B | RAD6B | UBC2ubiquitin conjugating enzyme E2 B5q31.1CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_I
9555H2AFYH2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2H2A histone family member Y5q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3313HSPA9CRP40 | CSA | EVPLS | GRP-75 | GRP75 | HEL-S-124m | HSPA9B | MOT | MOT2 | MTHSP75 | PBP74 | SAANheat shock protein family A (Hsp70) member 95q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
79770TXNDC15C5orf14 | UNQ335thioredoxin domain containing 155q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
51237MZB1MEDA-7 | PACAP | pERp1marginal zone B and B1 cell specific protein5q31.2GSMA_I
PMID:cooccur
340061TMEM173ERIS | MITA | MPYS | NET23 | SAVI | STING | hMITA | hSTINGtransmembrane protein 1735q31.2CV:PGCnp
DMG:Montano_2016
GSMA_I
7322UBE2D2E2(17)KB2 | PUBC1 | UBC4 | UBC4/5 | UBCH4 | UBCH5Bubiquitin conjugating enzyme E2 D25q31.2CV:PGCnp
GSMA_I
51523CXXC5CF5 | HSPC195 | RINF | WIDCXXC finger protein 55q31.2CV:PGCnp
GSMA_I
64411ARAP3CENTD3 | DRAG1ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 35q31.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
2908NR3C1GCCR | GCR | GCRST | GR | GRLnuclear receptor subfamily 3 group C member 15q31.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
3550IKCSA2 | REDIK cytokine, down-regulator of HLA II5q31.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
Ascano FMRP targets
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
133522PPARGC1BERRL1 | PERC | PGC-1(beta) | PGC1BPPARG coactivator 1 beta5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1436CSF1RC-FMS | CD115 | CSF-1R | CSFR | FIM2 | FMS | HDLS | M-CSF-Rcolony stimulating factor 1 receptor5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4238MFAP3-microfibrillar associated protein 35q32-q33.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
10146G3BP1G3BP | HDH-VIIIG3BP stress granule assembly factor 15q33.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
23367LARP1LARPLa ribonucleoprotein domain family member 15q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
153830RNF145-ring finger protein 1455q33.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
26999CYFIP2PIR121cytoplasmic FMR1 interacting protein 25q33.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2870GRK6GPRK6G protein-coupled receptor kinase 65q35CV:PGCnp
GSMA_IIA
PMID:cooccur
821CANXCNX | IP90 | P90calnexin5q35CV:PGCnp
DNM:Xu_2012
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
CompositeSet
57222ERGIC1ERGIC-32 | ERGIC32 | NET24endoplasmic reticulum-golgi intermediate compartment 15q35.1CV:PGCnp
Expression
GSMA_IIA
1794DOCK2IMD40dedicator of cytokinesis 25q35.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
22838RNF44-ring finger protein 445q35.2CV:PGCnp
GSMA_IIA
10814CPLX2921-L | CPX-2 | CPX2 | Hfb1complexin 25q35.2Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
3101HK3HKIII | HXK3hexokinase 35q35.2CV:GWASdb
CV:PGCnp
GSMA_IIA
PMID:cooccur
23061TBC1D9BGRAMD9BTBC1 domain family member 9B5q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3182HNRNPABABBP1 | HNRPABheterogeneous nuclear ribonucleoprotein A/B5q35.3CV:GWASdb
CV:PGCnp
3187HNRNPH1HNRPH | HNRPH1 | hnRNPHheterogeneous nuclear ribonucleoprotein H1 (H)5q35.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
55819RNF130G1RZFP | GOLIATH | GPring finger protein 1305q35.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
94081SFXN1-sideroflexin 15q35.3CV:GWASdb
CV:PGCnp
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
CompositeSet
80230RUFY1RABIP4 | ZFYVE12RUN and FYVE domain containing 15q35.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
Ascano FMRP targets
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
988CDC5LCDC5 | CDC5-LIKE | CEF1 | PCDC5RP | dJ319D22.1cell division cycle 5 like6p21CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Network
5429POLHRAD30 | RAD30A | XP-V | XPVpolymerase (DNA) eta6p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
57510XPO5exp5exportin 56p21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
6941TCF19SC1 | TCF-19transcription factor 196p21.3CV:PGCnp
GSMA_I
3117HLA-DQA1CD | CELIAC1 | DQ-A1 | GSE | HLA-DQAmajor histocompatibility complex, class II, DQ alpha 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
6046BRD2D6S113E | FSH | FSRG1 | NAT | O27.1.1 | RING3 | RNF3bromodomain containing 26p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
4800NFYACBF-A | CBF-B | HAP2 | NF-YAnuclear transcription factor Y subunit alpha6p21.3CV:GWASdb
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
50854C6orf48D6S57 | G8chromosome 6 open reading frame 486p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
GSMA_I
2968GTF2H4P52 | TFB2 | TFIIHgeneral transcription factor IIH subunit 46p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
63940GPSM3AGS4 | C6orf9 | G18 | G18.1a | G18.1b | G18.2 | NG1G-protein signaling modulator 36p21.3CV:GWASdb
CV:PGCnp
GSMA_I
5696PSMB8ALDD | D6S216 | D6S216E | JMP | LMP7 | NKJO | PSMB5i | RING10proteasome subunit beta 86p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
1432MAPK14CSBP | CSBP1 | CSBP2 | CSPB1 | EXIP | Mxi2 | PRKM14 | PRKM15 | RK | SAPK2A | p38 | p38ALPHAmitogen-activated protein kinase 146p21.3-p21.2CV:PGCnp
GSMA_I
GSMA_IIE
Network
PMID:cooccur
6732SRPK1SFRSK1SRSF protein kinase 16p21.31CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIE
23294ANKS1AANKS1ankyrin repeat and sterile alpha motif domain containing 1A6p21.31CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
Ascano FMRP targets
23ABCF1ABC27 | ABC50ATP binding cassette subfamily F member 16p21.33CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
221545C6orf136-chromosome 6 open reading frame 1366p21.33CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GSMA_I
5987TRIM27RFP | RNF76tripartite motif containing 276p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
6659SOX4EVI16SRY-box 46p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
29116MYLIPIDOL | MIRmyosin regulatory light chain interacting protein6p22.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
81688C6orf62Nbla00237 | XTP12 | dJ30M3.2chromosome 6 open reading frame 626p22.3CV:PGCnp
GSMA_I
84062DTNBP1BLOC1S8 | DBND | HPS7 | My031 | SDYdystrobrevin binding protein 16p22.3Association
Core
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
255488RNF144BIBRDC2 | PIR2 | bA528A10.3 | p53RFPring finger protein 144B6p22.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
9750FAM65BC6orf32 | DFNB104 | DIFF40 | DIFF48 | MYONAP | PL48family with sequence similarity 65 member B6p22.3-p21.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
51567TDP2AD022 | EAP2 | EAPII | TTRAP | dJ30M3.3 | hTDP2tyrosyl-DNA phosphodiesterase 26p22.3-p22.1CV:PGCnp
GSMA_I
10048RANBP9BPM-L | BPM90 | RANBPM | RanBP7RAN binding protein 96p23CV:PGCnp
GSMA_I
Network
PMID:cooccur
3720JARID2JMJjumonji and AT-rich interaction domain containing 26p24-p23Association
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Ascano FMRP targets
Chromatin Remodeling Genes
100113407TMEM170B-transmembrane protein 170B6p24.2CV:PGCnp
4739NEDD9CAS-L | CAS2 | CASL | CASS2 | HEF1neural precursor cell expressed, developmentally down-regulated 96p24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
83732RIOK1AD034 | RRP10 | bA288G3.1RIO kinase 16p24.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6239RREB1FINB | HNT | LZ321 | RREB-1 | Zep-1ras responsive element binding protein 16p25CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
9425CDYLCDYL1chromodomain protein, Y-like6p25.1CV:PGCnp
GSMA_I
10799RPP40RNASEP1 | bA428J1.3ribonuclease P/MRP 40kDa subunit6p25.1CV:PGCnp
GSMA_I
8737RIPK1RIP | RIP-1 | RIP1receptor interacting serine/threonine kinase 16p25.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
55770EXOC2SEC5 | SEC5L1 | Sec5pexocyst complex component 26p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
2162F13A1F13Acoagulation factor XIII A chain6p25.3-p24.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
51167CYB5R4NCB5OR | cb5/cb5R | dJ676J13.1cytochrome b5 reductase 46pter-q22.33CV:PGCnp
DMG:Jaffe_2016
7803PTP4A1HH72 | PRL-1 | PRL1 | PTP(CAAX1) | PTPCAAX1protein tyrosine phosphatase type IVA, member 16q12CV:GWASdb
CV:PGCnp
51389RWDD1CGI-24 | PTD013RWD domain containing 16q13-q22.33CV:GWASdb
CV:PGCnp
25998IBTKBTBD26 | BTKIinhibitor of Bruton tyrosine kinase6q14.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6885MAP3K7MEKK7 | TAK1 | TGF1amitogen-activated protein kinase kinase kinase 76q15CV:PGCnp
DMG:Jaffe_2016
Network
112495GTF3C6C6orf51 | TFIIIC35 | bA397G5.3general transcription factor IIIC subunit 66q21CV:PGCnp
8763CD164DFNA66 | MGC-24 | MUC-24 | endolynCD164 molecule6q21CV:PGCnp
DMG:Jaffe_2016
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
9474ATG5APG5 | APG5-LIKE | APG5L | ASP | hAPG5autophagy related 56q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
23097CDK19CDC2L6 | CDK11 | bA346C16.3cyclin-dependent kinase 196q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
27244SESN1PA26 | SEST1sestrin 16q21CV:PGCnp
285753CEP57L1C6orf182 | bA487F23.2 | cep57Rcentrosomal protein 57kDa-like 16q21CV:PGCnp
DMG:Jaffe_2016
28962OSTM1GIPN | GL | HSPC019 | OPTB5osteopetrosis associated transmembrane protein 16q21CV:GWAScat
CV:GWASdb
CV:PGCnp
5550PREPPE | PEPprolyl endopeptidase6q22CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
116150NUS1C6orf68 | MGC:7199 | NgBR | TANGO14NUS1 dehydrodolichyl diphosphate synthase subunit6q22.1CV:PGCnp
221294NT5DC1C6orf200 | LP2642 | NT5C2L15'-nucleotidase domain containing 16q22.1CV:PGCnp
DMG:Nishioka_2013
10924SMPDL3AASM3A | ASML3a | yR36GH4.1sphingomyelin phosphodiesterase acid like 3A6q22.31CV:PGCnp
DMG:Nishioka_2013
4217MAP3K5ASK1 | MAPKKK5 | MEKK5mitogen-activated protein kinase kinase kinase 56q22.33CV:PGCnp
DMG:Jaffe_2016
Network
Ascano FMRP targets
9439MED23ARC130 | CRSP130 | CRSP133 | CRSP3 | DRIP130 | MRT18 | SUR-2 | SUR2mediator complex subunit 236q22.33-q24.1CV:PGCnp
DMG:Jaffe_2016
2037EPB41L24.1-G | 4.1Gerythrocyte membrane protein band 4.1-like 26q23CV:PGCnp
Network
STRUCTURAL PLASTICITY
51696HECAHDC | HDCL | HHDC | dJ225E12.1hdc homolog, cell cycle regulator6q23-q24CV:PGCnp
DMG:Nishioka_2013
9053MAP7E-MAP-115 | EMAP115microtubule associated protein 76q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9590AKAP12AKAP250 | SSeCKSA-kinase anchoring protein 126q24-q25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
85021REPS1RALBP1RALBP1 associated Eps domain containing 16q24.1CV:PGCnp
DMG:Wockner_2014
8504PEX3PBD10A | TRG18peroxisomal biogenesis factor 36q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
10981RAB32-RAB32, member RAS oncogene family6q24.3CV:PGCnp
DMG:vanEijk_2014
134957STXBP5LGL3 | LLGL3 | Nbla04300syntaxin binding protein 56q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23345SYNE18B | ARCA1 | C6orf98 | CPG2 | EDMD4 | MYNE1 | Nesp1 | SCAR8 | dJ45H2.2spectrin repeat containing, nuclear envelope 16q25CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9589WTAPMum2Wilms tumor 1 associated protein6q25-q27CV:PGCnp
5110PCMT1PIMTprotein-L-isoaspartate (D-aspartate) O-methyltransferase6q25.1CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
57492ARID1B6A3-5 | BAF250B | BRIGHT | DAN15 | ELD/OSA1 | MRD12 | OSA2 | P250RAT-rich interaction domain 1B6q25.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
22828SCAF8RBM16SR-related CTD associated factor 86q25.1-q25.3CV:PGCnp
DMG:Jaffe_2016
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
6196RPS6KA2HU-2 | MAPKAPK1C | RSK | RSK3 | S6K-alpha | S6K-alpha2 | p90-RSK3 | p90RSK2 | pp90RSK3ribosomal protein S6 kinase A26q27CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
908CCT6ACCT-zeta | CCT-zeta-1 | CCT6 | Cctz | HTR3 | MoDP-2 | TCP-1-zeta | TCP20 | TCPZ | TTCP20chaperonin containing TCP1 subunit 6A7p11.2CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
63979FIGNL1-fidgetin like 17p12.1CV:PGCnp
DMG:Wockner_2014
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
5814PURBPURBETApurine-rich element binding protein B7p13CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
79020C7orf25-chromosome 7 open reading frame 257p14.1CV:PGCnp
9844ELMO1CED-12 | CED12 | ELMO-1engulfment and cell motility 17p14.1CV:PGCnp
DEG:Maycox_2009
23333DPY19L1-dpy-19 like 1 (C. elegans)7p14.2CV:PGCnp
223082ZNRF2RNF202zinc and ring finger 2, E3 ubiquitin protein ligase7p14.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
51678MPP6PALS2 | VAM-1 | VAM1 | p55Tmembrane protein, palmitoylated 67p15CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5898RALARALv-ral simian leukemia viral oncogene homolog A (ras related)7p15-p13CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
29896TRA2AAWMS1 | HSU53209transformer 2 alpha homolog (Drosophila)7p15.3CV:PGCnp
DMG:Nishioka_2013
27075TSPAN13NET-6 | NET6 | TM4SF13tetraspanin 137p21.1CV:PGCnp
DMG:Jaffe_2016
54476RNF216CAHH | TRIAD3 | U7I1 | UBCE7IP1 | ZINring finger protein 2167p22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
221937FOXK1FOXK1Lforkhead box K17p22.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
84629TNRC18CAGL79 | TNRC18Atrinucleotide repeat containing 187p22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
84132USP42-ubiquitin specific peptidase 427p22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
90637ZFAND2AAIRAPzinc finger AN1-type containing 2A7p22.3CV:PGCnp
DMG:Wockner_2014
114049WBSCR22HASJ4442 | HUSSY-3 | MERM1 | PP3381 | WBMTWilliams Beuren syndrome chromosome region 227q11.23CNV:YES
CV:GWASdb
DMG:Nishioka_2013
9031BAZ1BWBSCR10 | WBSCR9 | WSTFbromodomain adjacent to zinc finger domain 1B7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
1021CDK6MCPH12 | PLSTIREcyclin-dependent kinase 67q21-q22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
2990GUSBBG | MPS7glucuronidase beta7q21.11CV:PGCnp
PMID:cooccur
54467ANKIB1-ankyrin repeat and IBR domain containing 17q21.2CV:PGCnp
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
7979SHFM1DSS1 | ECD | SEM1 | SHFD1 | SHSF1 | Shfdg1split hand/foot malformation (ectrodactyly) type 17q21.3CV:PGCnp
PMID:cooccur
6733SRPK2SFRSK2SRSF protein kinase 27q22-q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
83787ARMC10PNAS-112 | PNAS112 | PSEC0198 | SVHarmadillo repeat containing 107q22.1CV:PGCnpG2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
245812CNPY4PRAT4Bcanopy FGF signaling regulator 47q22.1DMG:vanEijk_2014
5001ORC5ORC5L | ORC5P | ORC5T | PPP1R117origin recognition complex subunit 57q22.1CV:PGCnp
29990PILRBFDFACT1 | FDFACT2paired immunoglobin-like type 2 receptor beta7q22.1CV:PGCnp
DMG:Wockner_2014
222255ATXN7L1ATXN7L4ataxin 7 like 17q22.3CV:PGCnp
26959HBP1-HMG-box transcription factor 17q22.3CV:PGCnp
PMID:cooccur
50640PNPLA8IPLA2-2 | IPLA2G | MMLA | PNPLA-gamma | iPLA2gammapatatin like phospholipase domain containing 87q31CV:PGCnp
DMG:Wockner_2014
54556ING3Eaf4 | ING2 | MEAF4 | p47ING3inhibitor of growth family member 37q31CV:PGCnp
26136TESTESS | TESS-2testin LIM domain protein7q31.2CV:PGCnp
PMID:cooccur
830CAPZA2CAPPA2 | CAPZcapping actin protein of muscle Z-line alpha subunit 27q31.2-q31.3CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
4698NDUFA5B13 | CI-13KD-B | CI-13kB | NUFM | UQOR13NADH:ubiquinone oxidoreductase subunit A57q31.33CV:PGCnp
DMG:Nishioka_2013
3663IRF5SLEB10interferon regulatory factor 57q32CV:PGCnp
PMID:cooccur
813CALU-calumenin7q32.1CV:PGCnp
DMG:Jaffe_2016
84928TMEM209NET31transmembrane protein 2097q32.2CV:PGCnp
84912SLC35B4YEA | YEA4solute carrier family 35 member B47q33CV:PGCnp
PMID:cooccur
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
136319MTPNGCDP | V-1myotrophin7q33CV:PGCnp
GO_Annotation
6742SSBP1Mt-SSB | SOSS-B1 | SSBP | mtSSBsingle-stranded DNA binding protein 1, mitochondrial7q34DMG:Nishioka_2013
55750AGKCATC5 | CTRCT38 | MTDPS10 | MULKacylglycerol kinase7q34CV:PGCnp
DMG:Wockner_2014
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
231AKR1B1ADR | ALDR1 | ALR2 | ARaldo-keto reductase family 1, member B1 (aldose reductase)7q35CV:PGCnp
DMG:Jaffe_2016
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
22976PAXIP1CAGF28 | CAGF29 | PACIP1 | PAXIP1L | PTIP | TNRC2PAX interacting protein 17q36CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
8454CUL1-cullin 17q36.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
10049DNAJB6DJ4 | DnaJ | HHDJ1 | HSJ-2 | HSJ2 | LGMD1D | LGMD1E | MRJ | MSJ-1DnaJ heat shock protein family (Hsp40) member B67q36.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7994KAT6AMOZ | MRD32 | MYST-3 | MYST3 | RUNXBP2 | ZC2HC6A | ZNF220lysine acetyltransferase 6A8p11CV:PGCnp
DMG:Jaffe_2016
27257LSM1CASM | YJL124CLSM1 homolog, mRNA degradation associated8p11.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3551IKBKBIKK-beta | IKK2 | IKKB | IMD15 | NFKBIKBinhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta8p11.2CV:PGCnp
DMG:Wockner_2014
Network
59339PLEKHA2TAPP2pleckstrin homology domain containing A28p11.22CV:PGCnp
DMG:Jaffe_2016
6867TACC1Ga55transforming acidic coiled-coil containing protein 18p11.22CV:PGCnp
DMG:Wockner_2014
10671DCTN6WS-3 | WS3 | p27dynactin subunit 68p12DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
23039XPO7EXP7 | RANBP16exportin 78p21CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
2936GSRHEL-75 | HEL-S-122mglutathione reductase8p21.1CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
23087TRIM35HLS5 | MAIRtripartite motif containing 358p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
5520PPP2R2AB55A | B55ALPHA | PR52A | PR55Aprotein phosphatase 2 regulatory subunit B, alpha8p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
Network
80005DOCK5-dedicator of cytokinesis 58p21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
55872PBKCT84 | HEL164 | Nori-3 | SPK | TOPKPDZ binding kinase8p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
57509MTUS1ATBP | ATIP | ICIS | MP44 | MTSG1microtubule associated tumor suppressor 18p22CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
427ASAH1AC | ACDase | ASAH | PHP | PHP32 | SMAPMEN-acylsphingosine amidohydrolase (acid ceramidase) 18p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1808DPYSL2CRMP-2 | CRMP2 | DHPRP2 | DRP-2 | DRP2 | N2A3 | ULIP-2 | ULIP2dihydropyrimidinase like 28p22-p21Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
29883CNOT7CAF1 | Caf1a | hCAF-1CCR4-NOT transcription complex subunit 78p22-p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
66036MTMR9C8orf9 | LIP-STYX | MTMR8myotubularin related protein 98p23-p22CV:GWAScat
CV:PGCnp
55326AGPAT51AGPAT5 | LPAATE1-acylglycerol-3-phosphate O-acyltransferase 58p23.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
8439NSMAFFAN | GRAMD5neutral sphingomyelinase activation associated factor8q12.1CV:PGCnp
DMG:Jaffe_2016
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
137695TMEM68-transmembrane protein 688q12.1CV:PGCnp
DMG:Jaffe_2016
55636CHD7CRG | HH5 | IS3 | KAL5chromodomain helicase DNA binding protein 78q12.2CV:GWASdb
CV:PGCnp
Ascano FMRP targets
8836GGHGHgamma-glutamyl hydrolase8q12.3CV:PGCnp
DMG:Jaffe_2016
80124VCPIP1DUBA3 | VCIP135valosin containing protein (p97)/p47 complex interacting protein 18q13CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
Ascano FMRP targets
23212RRS1-ribosome biogenesis regulator homolog8q13.1CV:PGCnp
9650MTFR1CHPPR | FAM54A2mitochondrial fission regulator 18q13.1CV:PGCnp
DMG:Jaffe_2016
23471TRAM1PNAS8 | TRAM | TRAMPtranslocation associated membrane protein 18q13.3CV:PGCnp
DMG:Wockner_2014
55284UBE2WUBC-16 | UBC16ubiquitin conjugating enzyme E2 W (putative)8q21.11CV:PGCnp
DMG:Jaffe_2016
55824PAG1CBP | PAGphosphoprotein membrane anchor with glycosphingolipid microdomains 18q21.13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3612IMPA1IMP | IMPAinositol(myo)-1(or 4)-monophosphatase 18q21.13-q21.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
8895CPNE3CPN3 | PRO1071copine 38q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
9791PTDSS1LMHD | PSS1 | PSSAphosphatidylserine synthase 18q22CV:PGCnp
92140MTDH3D3 | AEG-1 | AEG1 | LYRIC | LYRIC/3D3metadherin8q22.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
25962KIAA1429MSTP054 | fSAP121KIAA14298q22.1CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
157680VPS13BCHS1 | COH1vacuolar protein sorting 13 homolog B (yeast)8q22.2CV:PGCnp
DMG:Jaffe_2016
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
25879DCAF13GM83 | HSPC064 | WDSOF1DDB1 and CUL4 associated factor 138q22.3CV:PGCnpAscano FMRP targets
51123ZNF706HSPC038 | PNAS-106 | PNAS-113zinc finger protein 7068q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9166EBAG9EB9 | PDAFestrogen receptor binding site associated, antigen, 98q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
55074OXR1Nbla00307 | TLDC3oxidation resistance 18q23CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
6503SLASLA1 | SLAPSrc-like-adaptor8q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
84294UTP23C8orf53UTP23, small subunit processome component8q24.11CV:PGCnp
DMG:Jaffe_2016
157769FAM91A1-family with sequence similarity 91 member A18q24.13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
51571FAM49BBM-009 | L1family with sequence similarity 49 member B8q24.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23167EFR3A-EFR3 homolog A8q24.22CV:PGCnp
DMG:Jaffe_2016
29894CPSF1CPSF160 | HSU37012 | P/cl.18cleavage and polyadenylation specific factor 18q24.23CV:PGCnpAscano FMRP targets
65263PYCRLPYCR3pyrroline-5-carboxylate reductase-like8q24.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
51010EXOSC3CGI-102 | PCH1B | RRP40 | Rrp40p | bA3J10.7 | hRrp-40 | p10exosome component 39p11CV:PGCnp
PMID:cooccur
152006RNF38-ring finger protein 389p13CV:GWASdb
CV:PGCnp
1211CLTALCAclathrin light chain A9p13CV:GWAScat
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
54926UBE2R2CDC34B | E2-CDC34B | UBC3Bubiquitin conjugating enzyme E2 R29p13.3CV:PGCnp
84720PIGOHPMRS2phosphatidylinositol glycan anchor biosynthesis class O9p13.3CV:PGCnp
DMG:Nishioka_2013
4507MTAPBDMF | DMSFH | DMSMFH | HEL-249 | LGMBF | MSAP | c86fusmethylthioadenosine phosphorylase9p21CV:PGCnp
55958KLHL9-kelch like family member 99p22CV:PGCnp
DMG:Jaffe_2016
10171RCL1RNAC | RPCL1RNA terminal phosphate cyclase-like 19p24.1-p23CV:GWASdb
CV:PGCnp
81704DOCK8HEL-205 | MRD2 | ZIR8dedicator of cytokinesis 89p24.3CV:PGCnp
2776GNAQCMC1 | G-ALPHA-q | GAQ | SWSG protein subunit alpha q9q21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.human_mGluR5
G2Cdb.humanPSP
Potential synaptic genes
116224FAM122AC9orf42family with sequence similarity 122A9q21.11CV:PGCnp
23670TMEM2-transmembrane protein 29q21.13CV:PGCnp
DMG:Jaffe_2016
Expression
Ascano FMRP targets
9615GDACYPIN | GUANASE | NEDASINguanine deaminase9q21.13CV:PGCnp
GO_Annotation
PMID:cooccur
CELL METABOLISM
G2Cdb.human_TAP-PSD-95-CORE
Potential synaptic genes
55071C9orf40-chromosome 9 open reading frame 409q21.13CV:PGCnp
DMG:Nishioka_2013
138241C9orf85-chromosome 9 open reading frame 859q21.13CV:PGCnp
301ANXA1ANX1 | LPC1annexin A19q21.13CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
29968PSAT1EPIP | NLS2 | PSA | PSAT | PSATDphosphoserine aminotransferase 19q21.2CV:PGCnp
GO_Annotation
PMID:cooccur
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
51280GOLM1C9orf155 | GOLPH2 | GP73 | HEL46 | PSEC0257 | bA379P1.3golgi membrane protein 19q21.33CV:PGCnp
DMG:Wockner_2014
6850SYKp72-Sykspleen tyrosine kinase9q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
10927SPIN1SPIN | TDRD24spindlin 19q22.1CV:PGCnp
23196FAM120AC9orf10 | DNAPTP1 | DNAPTP5 | OSSAfamily with sequence similarity 120A9q22.31CV:PGCnpCompositeSet
Darnell FMRP targets
8518IKBKAPDYS | ELP1 | FD | IKAP | IKI3 | TOT1inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein9q31CV:GWASdb
CV:PGCnp
Network
Ascano FMRP targets
23071ERP44PDIA10 | TXNDC4endoplasmic reticulum protein 449q31.1CV:PGCnp
54942FAM206AC9orf6 | CG-8 | Simiatefamily with sequence similarity 206 member A9q31.3CV:PGCnp
2790GNG10-G protein subunit gamma 109q31.3CV:PGCnpCANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
84263HSDL2C9orf99 | SDR13C1hydroxysteroid dehydrogenase like 29q32CV:PGCnp
5742PTGS1COX1 | COX3 | PCOX1 | PES-1 | PGG/HS | PGHS-1 | PGHS1 | PHS1 | PTGHSprostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)9q32-q33.3CV:PGCnp
PMID:cooccur
2934GSNADF | AGELgelsolin9q33CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
51552RAB14FBP | RAB-14RAB14, member RAS oncogene family9q33.2CV:PGCnp
GO_Annotation
INTRACELLULAR TRAFFICKING
55342STRBPHEL162 | ILF3L | SPNR | p74spermatid perinuclear RNA binding protein9q33.3CV:PGCnp
DMG:vanEijk_2014
3309HSPA5BIP | GRP78 | HEL-S-89n | MIF2heat shock protein family A (Hsp70) member 59q33.3CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
403341ZBTB34ZNF918zinc finger and BTB domain containing 349q33.3CV:PGCnp
8019BRD3ORFX | RING3Lbromodomain containing 39q34CV:PGCnp
DMG:Wockner_2014
27348TOR1BDQ1torsin family 1 member B9q34CV:GWASdb
CV:PGCnp
11091WDR5BIG-3 | CFAP89 | SWD3WD repeat domain 59q34CV:PGCnp
DMG:Jaffe_2016
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
51116MRPS2CGI-91 | MRP-S2 | S2mtmitochondrial ribosomal protein S29q34CV:PGCnp
DMG:Jaffe_2016
1861TOR1ADQ2 | DYT1torsin family 1 member A9q34CV:PGCnp
GO_Annotation
4851NOTCH1AOS5 | AOVD1 | TAN1 | hN1notch 19q34.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
375775PNPLA7C9orf111 | NTE-R1 | NTEL1patatin like phospholipase domain containing 79q34.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
64975MRPL41BMRP | MRP-L27 | MRPL27 | PIG3 | RPML27mitochondrial ribosomal protein L419q34.3DMG:Wockner_2014
79813EHMT1EUHMTASE1 | Eu-HMTase1 | FP13812 | GLP | GLP1 | KMT1D | bA188C12.1euchromatic histone-lysine N-methyltransferase 19q34.3CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
8241RBM10DXS8237E | GPATC9 | GPATCH9 | S1-1 | TARPS | ZRANB5RNA binding motif protein 10Xp11.23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
6102RP2DELXp11.3 | NM23-H10 | NME10 | TBCCD2 | XRP2retinitis pigmentosa 2 (X-linked recessive)Xp11.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1536CYBBAMCBX2 | CGD | GP91-1 | GP91-PHOX | GP91PHOX | IMD34 | NOX2 | p91-PHOXcytochrome b-245, beta polypeptideXp21.1CV:PGCnp
DEG:Sanders_2013
6611SMSMRSR | SPMSY | SRS | SpSspermine synthaseXp22.1CV:PGCnp
PMID:cooccur
30011SH3KBP1CD2BP3 | CIN85 | GIG10 | HSB-1 | HSB1 | MIG18SH3-domain kinase binding protein 1Xp22.1-p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
1438CSF2RACD116 | CDw116 | CSF2R | CSF2RAX | CSF2RAY | CSF2RX | CSF2RY | GM-CSF-R-alpha | GMCSFR | GMR | SMDP4colony stimulating factor 2 receptor alpha subunitXp22.32 and Yp11.3Association
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
4478MSNHEL70moesinXq11.1GO_Annotation
Network
PMID:cooccur
CompositeSet
Potential synaptic genes
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
340527NHSL2-NHS like 2Xq13.1CV:PGCnp
DNM:Guipponi_2014
84061MAGT1IAP | MRX95 | OST3B | PRO0756 | XMEN | bA217H1.1magnesium transporter 1Xq21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
695BTKAGMX1 | AT | ATK | BPK | IMD1 | PSCTK1 | XLABruton tyrosine kinaseXq21.33-q22CV:PGCnp
DNM:Kranz_2015
Network
PMID:cooccur
7319UBE2AHHR6A | MRXS30 | MRXSN | RAD6A | UBC2ubiquitin conjugating enzyme E2 AXq24CV:PGCnp
PMID:cooccur
331XIAPAPI3 | BIRC4 | IAP-3 | ILP1 | MIHA | XLP2 | hIAP-3 | hIAP3X-linked inhibitor of apoptosisXq25CV:PGCnp
Network
PMID:cooccur
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
393ARHGAP4C1 | RGC1 | RhoGAP4 | SrGAP4 | p115Rho GTPase activating protein 4Xq28CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
203547VMA21MEAX | XMEAVMA21 vacuolar H+-ATPase homolog (S. cerevisiae)Xq28CV:GWASdb
CV:PGCnp
215ABCD1ABC42 | ALD | ALDP | AMNATP binding cassette subfamily D member 1Xq28CV:GWAScat
CV:GWASdb
CV:PGCnp